RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 FAM155AB1AL88 458 aaPredicted RBP7.84□□□□□ -1.15
CD44-204ENST00000279452 M0R2C6 588 aa7.84□□□□□ -1.15
CD44-204ENST00000279452 GPAA1O43292 621 aa7.84□□□□□ -1.15
CD44-204ENST00000279452 MAP2K2P36507 400 aa7.84□□□□□ -1.15
CD44-204ENST00000279452 SREBF2Q12772 1141 aa7.84□□□□□ -1.15
CD44-204ENST00000279452 SPRYD7Q5W111 196 aa7.84□□□□□ -1.15
CD44-204ENST00000279452 TTC6Q86TZ1 520 aa7.84□□□□□ -1.15
CD44-204ENST00000279452 STK11IPQ8N1F8 1099 aa7.84□□□□□ -1.15
CD44-204ENST00000279452 JMYQ8N9B5 988 aa7.84□□□□□ -1.15
CD44-204ENST00000279452 OSBP2Q969R2 916 aa7.84□□□□□ -1.15
CD44-204ENST00000279452 ZIC5Q96T25 663 aa7.84□□□□□ -1.15
CD44-204ENST00000279452 SEC62Q99442 399 aaKnown RBP7.84□□□□□ -1.15
CD44-204ENST00000279452 DCP1AQ9NPI6 582 aaPredicted RBP7.84□□□□□ -1.15
CD44-204ENST00000279452 DIAPH3Q9NSV4 1193 aa7.84□□□□□ -1.15
CD44-204ENST00000279452 TSKSQ9UJT2 592 aa7.84□□□□□ -1.15
CD44-204ENST00000279452 SNCAIPQ9Y6H5 919 aa7.84□□□□□ -1.15
CD44-204ENST00000279452 POLR2AP24928 1970 aaKnown RBP7.83□□□□□ -1.16
CD44-204ENST00000279452 MANSC4A6NHS7 340 aaPredicted RBP7.83□□□□□ -1.16
CD44-204ENST00000279452 SPDYE5A6NIY4 337 aa7.83□□□□□ -1.16
CD44-204ENST00000279452 UNCXA6NJT0 531 aa7.83□□□□□ -1.16
CD44-204ENST00000279452 MINDY4BA8MYZ0 360 aa7.83□□□□□ -1.16
CD44-204ENST00000279452 MPHOSPH10O00566 681 aaKnown RBP7.83□□□□□ -1.16
CD44-204ENST00000279452 GDF11O95390 407 aa7.83□□□□□ -1.16
CD44-204ENST00000279452 ZBTB48P10074 688 aaPredicted RBP7.83□□□□□ -1.16
CD44-204ENST00000279452 CYP2D6P10635 497 aa7.83□□□□□ -1.16
CD44-204ENST00000279452 GNAT2P19087 354 aa7.83□□□□□ -1.16
CD44-204ENST00000279452 NMIQ13287 307 aaPredicted RBP7.83□□□□□ -1.16
CD44-204ENST00000279452 TTC22Q5TAA0 569 aa7.83□□□□□ -1.16
CD44-204ENST00000279452 CCDC129Q6ZRS4 1044 aa7.83□□□□□ -1.16
CD44-204ENST00000279452 ERO1BQ86YB8 467 aa7.83□□□□□ -1.16
CD44-204ENST00000279452 SCYL3Q8IZE3 742 aa7.83□□□□□ -1.16
CD44-204ENST00000279452 NACAP1Q9BZK3 213 aa7.83□□□□□ -1.16
CD44-204ENST00000279452 OSBPL3Q9H4L5 887 aa7.83□□□□□ -1.16
CD44-204ENST00000279452 ATP8A2Q9NTI2 1148 aa7.83□□□□□ -1.16
CD44-204ENST00000279452 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.83□□□□□ -1.16
CD44-204ENST00000279452 HERC5Q9UII4 1024 aaKnown RBP7.83□□□□□ -1.16
CD44-204ENST00000279452 SERPINB13Q9UIV8 391 aa7.83□□□□□ -1.16
CD44-204ENST00000279452 NAV1Q8NEY1 1877 aa7.83□□□□□ -1.16
CD44-204ENST00000279452 MYO5AQ9Y4I1 1855 aaKnown RBP7.83□□□□□ -1.16
CD44-204ENST00000279452 OTOFQ9HC10 1997 aa7.82□□□□□ -1.16
CD44-204ENST00000279452 THSD7BQ9C0I4 1608 aa7.82□□□□□ -1.16
CD44-204ENST00000279452 CYP2D7A0A087X1C5 515 aa7.82□□□□□ -1.16
CD44-204ENST00000279452 CCL15-CCL14A0A0B4J2E2 113 aa7.82□□□□□ -1.16
CD44-204ENST00000279452 TRIM75PA6NK02 468 aa7.82□□□□□ -1.16
CD44-204ENST00000279452 USP17L12C9JPN9 530 aa7.82□□□□□ -1.16
CD44-204ENST00000279452 USP17L21D6R901 530 aa7.82□□□□□ -1.16
CD44-204ENST00000279452 CTNND1O60716 968 aaKnown RBP7.82□□□□□ -1.16
CD44-204ENST00000279452 TRPA1O75762 1119 aa7.82□□□□□ -1.16
CD44-204ENST00000279452 PLCD1P51178 756 aa7.82□□□□□ -1.16
CD44-204ENST00000279452 GTF2A2P52657 109 aa7.82□□□□□ -1.16
CD44-204ENST00000279452 SNAPC2Q13487 334 aa7.82□□□□□ -1.16
CD44-204ENST00000279452 CCL15Q16663 113 aa7.82□□□□□ -1.16
CD44-204ENST00000279452 ZMYM1Q5SVZ6 1142 aa7.82□□□□□ -1.16
CD44-204ENST00000279452 CWC27Q6UX04 472 aaKnown RBP7.82□□□□□ -1.16
CD44-204ENST00000279452 CCDC84Q86UT8 332 aaPredicted RBP7.82□□□□□ -1.16
CD44-204ENST00000279452 SKAP1Q86WV1 359 aa7.82□□□□□ -1.16
CD44-204ENST00000279452 FOXP4Q8IVH2 680 aaPredicted RBP7.82□□□□□ -1.16
CD44-204ENST00000279452 FAM227BQ96M60 508 aa7.82□□□□□ -1.16
CD44-204ENST00000279452 STRBPQ96SI9 672 aaKnown RBP7.82□□□□□ -1.16
CD44-204ENST00000279452 NAPBQ9H115 298 aa7.82□□□□□ -1.16
CD44-204ENST00000279452 ARPP21Q9UBL0 812 aaPredicted RBP7.82□□□□□ -1.16
CD44-204ENST00000279452 ZHX2Q9Y6X8 837 aa7.82□□□□□ -1.16
CD44-204ENST00000279452 A0A0D9SFI3 127 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 PHF20L1A8MW92 1017 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 HIP1O00291 1037 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 IRF6O14896 467 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 FOXN1O15353 648 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 TBC1D12O60347 775 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 GSPT1P15170 499 aaKnown RBP7.81□□□□□ -1.16
CD44-204ENST00000279452 PTPRAP18433 802 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 SDSP20132 328 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 GJA5P36382 358 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 CAP2P40123 477 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 MFAP1P55081 439 aaKnown RBP7.81□□□□□ -1.16
CD44-204ENST00000279452 EVX2Q03828 476 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 PPATQ06203 517 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 PPIL2Q13356 520 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 RAB3GAP1Q15042 981 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 CERKLQ49MI3 558 aaPredicted RBP7.81□□□□□ -1.16
CD44-204ENST00000279452 MCMDC2Q4G0Z9 681 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 NOL9Q5SY16 702 aaKnown RBP7.81□□□□□ -1.16
CD44-204ENST00000279452 OTUD7BQ6GQQ9 843 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 GADL1Q6ZQY3 521 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 REM2Q8IYK8 340 aaPredicted RBP7.81□□□□□ -1.16
CD44-204ENST00000279452 SLC44A5Q8NCS7 719 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 DYNLL2Q96FJ2 89 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 FEZ1Q99689 392 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 EHD4Q9H223 541 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 DNAJC18Q9H819 358 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 AS3MTQ9HBK9 375 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 CABP5Q9NP86 173 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 HELLSQ9NRZ9 838 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 WBP1LQ9NX94 342 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 PPP4R2Q9NY27 417 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 ZNF112Q9UJU3 913 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 AK9Q5TCS8 1911 aa7.81□□□□□ -1.16
CD44-204ENST00000279452 GSG1L2A8MUP6 293 aa7.8□□□□□ -1.16
CD44-204ENST00000279452 PATL2C9JE40 543 aaKnown RBP7.8□□□□□ -1.16
CD44-204ENST00000279452 CA12O43570 354 aa7.8□□□□□ -1.16
CD44-204ENST00000279452 GH2P01242 217 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms