RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 TREML2Q5T2D2 321 aa18.75■□□□□ 0.59
SOD1-201ENST00000270142 FTSJ3Q8IY81 847 aaKnown RBP18.75■□□□□ 0.59
SOD1-201ENST00000270142 AATFQ9NY61 560 aaKnown RBP eCLIP18.75■□□□□ 0.59
SOD1-201ENST00000270142 MAST2Q6P0Q8 1798 aa18.75■□□□□ 0.59
SOD1-201ENST00000270142 SURF6O75683 361 aaKnown RBP18.74■□□□□ 0.59
SOD1-201ENST00000270142 RLBP1P12271 317 aa18.74■□□□□ 0.59
SOD1-201ENST00000270142 NAA16Q6N069 864 aaPredicted RBP18.74■□□□□ 0.59
SOD1-201ENST00000270142 ITPRIPQ8IWB1 547 aa18.74■□□□□ 0.59
SOD1-201ENST00000270142 SMCR8Q8TEV9 937 aaPredicted RBP18.74■□□□□ 0.59
SOD1-201ENST00000270142 PCDH10Q9P2E7 1040 aa18.74■□□□□ 0.59
SOD1-201ENST00000270142 CYP2E1P05181 493 aaPredicted RBP18.73■□□□□ 0.59
SOD1-201ENST00000270142 CAP2P40123 477 aa18.73■□□□□ 0.59
SOD1-201ENST00000270142 HABP4Q5JVS0 413 aaKnown RBP18.73■□□□□ 0.59
SOD1-201ENST00000270142 ADGRA1Q86SQ6 560 aa18.73■□□□□ 0.59
SOD1-201ENST00000270142 NOL10Q9BSC4 688 aaKnown RBP18.73■□□□□ 0.59
SOD1-201ENST00000270142 TLR7Q9NYK1 1049 aaKnown RBP18.73■□□□□ 0.59
SOD1-201ENST00000270142 MGAMO43451 1857 aa18.73■□□□□ 0.59
SOD1-201ENST00000270142 ZBTB7BO15156 539 aaPredicted RBP18.72■□□□□ 0.59
SOD1-201ENST00000270142 BAG3O95817 575 aa18.72■□□□□ 0.59
SOD1-201ENST00000270142 CCL5P13501 91 aa18.72■□□□□ 0.59
SOD1-201ENST00000270142 ZAP70P43403 619 aa18.72■□□□□ 0.59
SOD1-201ENST00000270142 SPP2Q13103 211 aa18.72■□□□□ 0.59
SOD1-201ENST00000270142 MIER1Q8N108 512 aa18.72■□□□□ 0.59
SOD1-201ENST00000270142 PROCA1Q8NCQ7 364 aaPredicted RBP18.72■□□□□ 0.59
SOD1-201ENST00000270142 ZNF280CQ8ND82 737 aa18.72■□□□□ 0.59
SOD1-201ENST00000270142 SLAIN1Q8ND83 568 aa18.72■□□□□ 0.59
SOD1-201ENST00000270142 HERC5Q9UII4 1024 aaKnown RBP18.72■□□□□ 0.59
SOD1-201ENST00000270142 DBNLQ9UJU6 430 aaKnown RBP18.72■□□□□ 0.59
SOD1-201ENST00000270142 NOP58Q9Y2X3 529 aaKnown RBP18.72■□□□□ 0.59
SOD1-201ENST00000270142 FLT3LGP49771 235 aa18.71■□□□□ 0.59
SOD1-201ENST00000270142 PPP4CP60510 307 aa18.71■□□□□ 0.59
SOD1-201ENST00000270142 UBXN2AP68543 259 aa18.71■□□□□ 0.59
SOD1-201ENST00000270142 MAPKAPK5Q8IW41 473 aa18.71■□□□□ 0.59
SOD1-201ENST00000270142 ANKRD13CQ8N6S4 541 aa18.71■□□□□ 0.59
SOD1-201ENST00000270142 TGFBRAP1Q8WUH2 860 aa18.71■□□□□ 0.59
SOD1-201ENST00000270142 ZNF512BQ96KM6 892 aaPredicted RBP18.71■□□□□ 0.59
SOD1-201ENST00000270142 TBC1D2Q9BYX2 928 aa18.71■□□□□ 0.59
SOD1-201ENST00000270142 RNF208Q9H0X6 261 aa18.71■□□□□ 0.59
SOD1-201ENST00000270142 PIH1D3Q9NQM4 214 aaKnown RBP18.71■□□□□ 0.59
SOD1-201ENST00000270142 PI4KBQ9UBF8 816 aa18.71■□□□□ 0.59
SOD1-201ENST00000270142 BIN2Q9UBW5 565 aaPredicted RBP18.71■□□□□ 0.59
SOD1-201ENST00000270142 PNMA3Q9UL41 463 aa18.71■□□□□ 0.59
SOD1-201ENST00000270142 SIPA1L1O43166 1804 aa18.71■□□□□ 0.59
SOD1-201ENST00000270142 FLT1P17948 1338 aa18.71■□□□□ 0.59
SOD1-201ENST00000270142 LOC285556D6RIA3 1793 aa18.7■□□□□ 0.58
SOD1-201ENST00000270142 ATAD5Q96QE3 1844 aa18.7■□□□□ 0.58
SOD1-201ENST00000270142 USP17L5A8MUK1 530 aa18.7■□□□□ 0.58
SOD1-201ENST00000270142 TNPO2O14787 897 aaKnown RBP18.7■□□□□ 0.58
SOD1-201ENST00000270142 GJB1P08034 283 aa18.7■□□□□ 0.58
SOD1-201ENST00000270142 GJA8P48165 433 aa18.7■□□□□ 0.58
SOD1-201ENST00000270142 HMGCS2P54868 508 aa18.7■□□□□ 0.58
SOD1-201ENST00000270142 NKX2-3Q8TAU0 364 aa18.7■□□□□ 0.58
SOD1-201ENST00000270142 CCDC8Q9H0W5 538 aaPredicted RBP18.7■□□□□ 0.58
SOD1-201ENST00000270142 DHX36Q9H2U1 1008 aaKnown RBP18.7■□□□□ 0.58
SOD1-201ENST00000270142 DNAJC18Q9H819 358 aa18.7■□□□□ 0.58
SOD1-201ENST00000270142 ADCY3O60266 1144 aa18.69■□□□□ 0.58
SOD1-201ENST00000270142 PLCG2P16885 1265 aa18.69■□□□□ 0.58
SOD1-201ENST00000270142 FAM110CQ1W6H9 321 aa18.69■□□□□ 0.58
SOD1-201ENST00000270142 SH3D19Q5HYK7 790 aa18.69■□□□□ 0.58
SOD1-201ENST00000270142 EAF2Q96CJ1 260 aaPredicted RBP18.69■□□□□ 0.58
SOD1-201ENST00000270142 ELNP15502 786 aa18.68■□□□□ 0.58
SOD1-201ENST00000270142 DYNLL1P63167 89 aaKnown RBP18.68■□□□□ 0.58
SOD1-201ENST00000270142 CEP85Q6P2H3 762 aa18.68■□□□□ 0.58
SOD1-201ENST00000270142 UNC93B1Q9H1C4 597 aa18.68■□□□□ 0.58
SOD1-201ENST00000270142 AS3MTQ9HBK9 375 aa18.68■□□□□ 0.58
SOD1-201ENST00000270142 INHAP05111 366 aa18.67■□□□□ 0.58
SOD1-201ENST00000270142 JAG1P78504 1218 aa18.67■□□□□ 0.58
SOD1-201ENST00000270142 IRF5Q13568 498 aa18.67■□□□□ 0.58
SOD1-201ENST00000270142 SHROOM1Q2M3G4 852 aaPredicted RBP18.67■□□□□ 0.58
SOD1-201ENST00000270142 UBE2Q1Q7Z7E8 422 aa18.67■□□□□ 0.58
SOD1-201ENST00000270142 METTL16Q86W50 562 aaKnown RBP18.67■□□□□ 0.58
SOD1-201ENST00000270142 PXYLP1Q8TE99 480 aa18.67■□□□□ 0.58
SOD1-201ENST00000270142 U2AF1L4Q8WU68 220 aaKnown RBP18.67■□□□□ 0.58
SOD1-201ENST00000270142 PALD1Q9ULE6 856 aa18.67■□□□□ 0.58
SOD1-201ENST00000270142 MYO5AQ9Y4I1 1855 aaKnown RBP18.67■□□□□ 0.58
SOD1-201ENST00000270142 FOCADQ5VW36 1801 aa18.66■□□□□ 0.58
SOD1-201ENST00000270142 H0YGN5 161 aa18.66■□□□□ 0.58
SOD1-201ENST00000270142 IGSF3O75054 1194 aa18.66■□□□□ 0.58
SOD1-201ENST00000270142 GDF11O95390 407 aa18.66■□□□□ 0.58
SOD1-201ENST00000270142 PABPC4Q13310 644 aaKnown RBP eCLIP18.66■□□□□ 0.584e-8■□□□□ 11.3
SOD1-201ENST00000270142 MTMR2Q13614 643 aa18.66■□□□□ 0.58
SOD1-201ENST00000270142 CRACR2BQ8N4Y2 399 aaPredicted RBP18.66■□□□□ 0.58
SOD1-201ENST00000270142 COA7Q96BR5 231 aa18.66■□□□□ 0.58
SOD1-201ENST00000270142 WDR18Q9BV38 432 aa18.66■□□□□ 0.58
SOD1-201ENST00000270142 ASCC2Q9H1I8 757 aaPredicted RBP18.66■□□□□ 0.58
SOD1-201ENST00000270142 SAP30BPQ9UHR5 308 aaKnown RBP18.66■□□□□ 0.58
SOD1-201ENST00000270142 TAOK2Q9UL54 1235 aa18.66■□□□□ 0.58
SOD1-201ENST00000270142 COLQQ9Y215 455 aaPredicted RBP18.66■□□□□ 0.58
SOD1-201ENST00000270142 NDUFB9Q9Y6M9 179 aa18.66■□□□□ 0.58
SOD1-201ENST00000270142 CDK5RAP2Q96SN8 1893 aa18.66■□□□□ 0.58
SOD1-201ENST00000270142 IDH1O75874 414 aaKnown RBP18.65■□□□□ 0.58
SOD1-201ENST00000270142 ASNSP08243 561 aa18.65■□□□□ 0.58
SOD1-201ENST00000270142 CYP7A1P22680 504 aa18.65■□□□□ 0.58
SOD1-201ENST00000270142 GCLCP48506 637 aaPredicted RBP18.65■□□□□ 0.58
SOD1-201ENST00000270142 FOXP4Q8IVH2 680 aaPredicted RBP18.65■□□□□ 0.58
SOD1-201ENST00000270142 EXOC6BQ9Y2D4 811 aa18.65■□□□□ 0.58
SOD1-201ENST00000270142 SGPL1O95470 568 aa18.64■□□□□ 0.57
SOD1-201ENST00000270142 BACE1P56817 501 aa18.64■□□□□ 0.57
SOD1-201ENST00000270142 MAGEB6Q8N7X4 407 aa18.64■□□□□ 0.57
SOD1-201ENST00000270142 MIGA1Q8NAN2 632 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms