RNA–Protein interactions for RNA: ENST00000262650.10

ITCH-201, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene ITCH, Length 3,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-201ENST00000262650 C11orf91Q3C1V1 193 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 PNMA8AQ86V59 439 aaPredicted RBP6.63□□□□□ -1.35
ITCH-201ENST00000262650 CCDC89Q8N998 374 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 OXER1Q8TDS5 423 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 CCDC102AQ96A19 550 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 TTC14Q96N46 770 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 CRBNQ96SW2 442 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 NIP7Q9Y221 180 aaKnown RBP eCLIP6.63□□□□□ -1.35
ITCH-201ENST00000262650 A0A1B0GUL6 1792 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 IL16Q14005 1332 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 TPM3P06753 285 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 TPM2P07951 284 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 CCDC15Q0P6D6 951 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 DCTN1Q14203 1278 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 OTUD6AQ7L8S5 288 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 SYNE4Q8N205 404 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 PHC3Q8NDX5 983 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 IER2Q9BTL4 223 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 DONSONQ9NYP3 566 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 POLG2Q9UHN1 485 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 PRSS47A8MTI9 375 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 GOLGA6L6A8MZA4 724 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 TRIM6-TRIM34B2RNG4 842 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 DDNO94850 711 aaPredicted RBP6.63□□□□□ -1.35
ITCH-201ENST00000262650 SEPT2Q15019 361 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 COL13A1Q5TAT6 717 aaPredicted RBP6.63□□□□□ -1.35
ITCH-201ENST00000262650 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.63□□□□□ -1.35
ITCH-201ENST00000262650 FBXO33Q7Z6M2 555 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 LCA5Q86VQ0 697 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 PAF1Q8N7H5 531 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 PPM1EQ8WY54 764 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 HHIPL1Q96JK4 782 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 HACL1Q9UJ83 578 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 CHL1O00533 1208 aa6.62□□□□□ -1.35
ITCH-201ENST00000262650 TMC4Q7Z404 712 aa6.62□□□□□ -1.35
ITCH-201ENST00000262650 TSC1Q92574 1164 aa6.62□□□□□ -1.35
ITCH-201ENST00000262650 APBA2Q99767 749 aa6.62□□□□□ -1.35
ITCH-201ENST00000262650 NCAPGQ9BPX3 1015 aa6.62□□□□□ -1.35
ITCH-201ENST00000262650 LZTS2Q9BRK4 669 aa6.62□□□□□ -1.35
ITCH-201ENST00000262650 MAFFQ9ULX9 164 aa6.62□□□□□ -1.35
ITCH-201ENST00000262650 ZNF232Q9UNY5 417 aa6.62□□□□□ -1.35
ITCH-201ENST00000262650 A6NJY4 79 aa6.62□□□□□ -1.35
ITCH-201ENST00000262650 HSPA1AP0DMV8 641 aaKnown RBP6.62□□□□□ -1.35
ITCH-201ENST00000262650 HSPA1BP0DMV9 641 aaKnown RBP6.62□□□□□ -1.35
ITCH-201ENST00000262650 RBM5P52756 815 aaKnown RBP eCLIP6.62□□□□□ -1.35
ITCH-201ENST00000262650 HTRA3P83110 453 aa6.62□□□□□ -1.35
ITCH-201ENST00000262650 SUSD4Q5VX71 490 aa6.62□□□□□ -1.35
ITCH-201ENST00000262650 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.62□□□□□ -1.35
ITCH-201ENST00000262650 MIGA1Q8NAN2 632 aa6.62□□□□□ -1.35
ITCH-201ENST00000262650 SMCR8Q8TEV9 937 aaPredicted RBP6.62□□□□□ -1.35
ITCH-201ENST00000262650 CDCA7LQ96GN5 454 aa6.62□□□□□ -1.35
ITCH-201ENST00000262650 RBM17Q96I25 401 aaKnown RBP6.62□□□□□ -1.35
ITCH-201ENST00000262650 SMC4Q9NTJ3 1288 aa6.62□□□□□ -1.35
ITCH-201ENST00000262650 COL4A1P02462 1669 aa6.62□□□□□ -1.35
ITCH-201ENST00000262650 TBX3O15119 743 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 CCDC175P0C221 793 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 ATP2B1P20020 1258 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 PIK3CAP42336 1068 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 MLLT3P42568 568 aaPredicted RBP6.61□□□□□ -1.35
ITCH-201ENST00000262650 DNAJC21Q5F1R6 531 aaKnown RBP6.61□□□□□ -1.35
ITCH-201ENST00000262650 SWT1Q5T5J6 900 aaKnown RBP6.61□□□□□ -1.35
ITCH-201ENST00000262650 TTLL7Q6ZT98 887 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 USP50Q70EL3 339 aaPredicted RBP6.61□□□□□ -1.35
ITCH-201ENST00000262650 KLHL23Q8NBE8 558 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 KMT5AQ9NQR1 393 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 HOXC10Q9NYD6 342 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 ATP6V0A2Q9Y487 856 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 U3KPZ7 1027 aaPredicted RBP6.61□□□□□ -1.35
ITCH-201ENST00000262650 GOLGA6L22H0YM25 854 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 GPR37O15354 613 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 EPHX2P34913 555 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 TRIM28Q13263 835 aaKnown RBP6.61□□□□□ -1.35
ITCH-201ENST00000262650 RAPGEF1Q13905 1077 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 C10orf62Q5T681 223 aaPredicted RBP6.61□□□□□ -1.35
ITCH-201ENST00000262650 PHLDB3Q6NSJ2 640 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 KIF6Q6ZMV9 814 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 STAG2Q8N3U4 1231 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 ADAMTS19Q8TE59 1207 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 ERCC4Q92889 916 aaPredicted RBP6.61□□□□□ -1.35
ITCH-201ENST00000262650 CCDC34Q96HJ3 373 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 GDPD2Q9HCC8 539 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 GINM1Q9NU53 330 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 WBP1LQ9NX94 342 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 ECM29Q5VYK3 1845 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 TNFRSF10BO14763 440 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 RPN1P04843 607 aaKnown RBP6.61□□□□□ -1.35
ITCH-201ENST00000262650 POTEIP0CG38 1075 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 POTEJP0CG39 1038 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 ZSCAN20P17040 1043 aaPredicted RBP6.61□□□□□ -1.35
ITCH-201ENST00000262650 ZNF131P52739 623 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 TMEM95Q3KNT9 176 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 ZCCHC8Q6NZY4 707 aaKnown RBP6.61□□□□□ -1.35
ITCH-201ENST00000262650 PPP1R42Q7Z4L9 355 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 SP8Q8IXZ3 490 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 ELOA2Q8IYF1 753 aaPredicted RBP6.61□□□□□ -1.35
ITCH-201ENST00000262650 CENPTQ96BT3 561 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 RMI1Q9H9A7 625 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 HDAC9Q9UKV0 1011 aa6.61□□□□□ -1.35
ITCH-201ENST00000262650 BBOX1O75936 387 aa6.6□□□□□ -1.35
ITCH-201ENST00000262650 SCNN1DP51172 638 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms