RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 FAM205CA6NFA0 338 aa11.67□□□□□ -0.54
COPB1-201ENST00000249923 FMNL1O95466 1100 aaPredicted RBP11.67□□□□□ -0.54
COPB1-201ENST00000249923 PRR29P0C7W0 189 aa11.67□□□□□ -0.54
COPB1-201ENST00000249923 HSP90AA4PQ58FG1 418 aa11.67□□□□□ -0.54
COPB1-201ENST00000249923 EARS2Q5JPH6 523 aaKnown RBP11.67□□□□□ -0.54
COPB1-201ENST00000249923 CCDC82Q8N4S0 544 aa11.67□□□□□ -0.54
COPB1-201ENST00000249923 TIGD1Q96MW7 591 aa11.67□□□□□ -0.54
COPB1-201ENST00000249923 PAXBP1Q9Y5B6 917 aa11.67□□□□□ -0.54
COPB1-201ENST00000249923 NEMFO60524 1076 aa11.66□□□□□ -0.54
COPB1-201ENST00000249923 IARSP41252 1262 aaKnown RBP11.66□□□□□ -0.54
COPB1-201ENST00000249923 FANCCQ00597 558 aa11.66□□□□□ -0.54
COPB1-201ENST00000249923 ITPK1Q13572 414 aa11.66□□□□□ -0.54
COPB1-201ENST00000249923 AKNAD1Q5T1N1 836 aa11.66□□□□□ -0.54
COPB1-201ENST00000249923 GRAMD1CQ8IYS0 662 aa11.66□□□□□ -0.54
COPB1-201ENST00000249923 RGS22Q8NE09 1264 aa11.66□□□□□ -0.54
COPB1-201ENST00000249923 IQSEC3Q9UPP2 1182 aaPredicted RBP11.66□□□□□ -0.54
COPB1-201ENST00000249923 MYH2Q9UKX2 1941 aa11.66□□□□□ -0.54
COPB1-201ENST00000249923 CAMTA2O94983 1202 aa11.66□□□□□ -0.54
COPB1-201ENST00000249923 MMP1P03956 469 aa11.66□□□□□ -0.54
COPB1-201ENST00000249923 TMEM139Q8IV31 216 aa11.66□□□□□ -0.54
COPB1-201ENST00000249923 PCDHA5Q9Y5H7 936 aa11.66□□□□□ -0.54
COPB1-201ENST00000249923 STK36Q9NRP7 1315 aa11.66□□□□□ -0.54
COPB1-201ENST00000249923 MYH6P13533 1939 aa11.66□□□□□ -0.54
COPB1-201ENST00000249923 IFIT3O14879 490 aaKnown RBP11.66□□□□□ -0.54
COPB1-201ENST00000249923 IKBKBO14920 756 aa11.66□□□□□ -0.54
COPB1-201ENST00000249923 IFNAR1P17181 557 aa11.66□□□□□ -0.54
COPB1-201ENST00000249923 FMR1Q06787 632 aaKnown RBP eCLIP11.66□□□□□ -0.543e-7■■■■□ 26.2
COPB1-201ENST00000249923 PTPN14Q15678 1187 aa11.66□□□□□ -0.54
COPB1-201ENST00000249923 NOSTRINQ8IVI9 506 aa11.66□□□□□ -0.54
COPB1-201ENST00000249923 SDR42E1Q8WUS8 393 aa11.66□□□□□ -0.54
COPB1-201ENST00000249923 STAG1Q8WVM7 1258 aa11.66□□□□□ -0.54
COPB1-201ENST00000249923 NAPBQ9H115 298 aa11.66□□□□□ -0.54
COPB1-201ENST00000249923 FBXO2Q9UK22 296 aaPredicted RBP11.66□□□□□ -0.54
COPB1-201ENST00000249923 PCDHB6Q9Y5E3 794 aa11.66□□□□□ -0.54
COPB1-201ENST00000249923 NTSR2O95665 410 aa11.65□□□□□ -0.54
COPB1-201ENST00000249923 UQCRFS1P1P0C7P4 283 aa11.65□□□□□ -0.54
COPB1-201ENST00000249923 NOM1Q5C9Z4 860 aaKnown RBP11.65□□□□□ -0.54
COPB1-201ENST00000249923 NFXL1Q6ZNB6 911 aa11.65□□□□□ -0.54
COPB1-201ENST00000249923 KRBA2Q6ZNG9 492 aa11.65□□□□□ -0.54
COPB1-201ENST00000249923 CHMP4CQ96CF2 233 aa11.65□□□□□ -0.54
COPB1-201ENST00000249923 IMPACTQ9P2X3 320 aa11.65□□□□□ -0.54
COPB1-201ENST00000249923 SCN7AQ01118 1682 aa11.65□□□□□ -0.54
COPB1-201ENST00000249923 A0A087X0B3 334 aa11.65□□□□□ -0.54
COPB1-201ENST00000249923 SYCP1Q15431 976 aa11.65□□□□□ -0.54
COPB1-201ENST00000249923 ZNF827Q17R98 1081 aa11.65□□□□□ -0.54
COPB1-201ENST00000249923 KMT5BQ4FZB7 885 aa11.65□□□□□ -0.54
COPB1-201ENST00000249923 FANCLQ9NW38 375 aa11.65□□□□□ -0.54
COPB1-201ENST00000249923 KCNH3Q9ULD8 1083 aa11.65□□□□□ -0.54
COPB1-201ENST00000249923 SLC12A7Q9Y666 1083 aa11.65□□□□□ -0.54
COPB1-201ENST00000249923 DUOX1Q9NRD9 1551 aa11.65□□□□□ -0.55
COPB1-201ENST00000249923 CRKLP46109 303 aaKnown RBP11.65□□□□□ -0.55
COPB1-201ENST00000249923 DIS3L2Q8IYB7 885 aaKnown RBP11.65□□□□□ -0.55
COPB1-201ENST00000249923 PNPLA7Q6ZV29 1317 aa11.64□□□□□ -0.55
COPB1-201ENST00000249923 ROBO1Q9Y6N7 1651 aa11.64□□□□□ -0.55
COPB1-201ENST00000249923 CYP2D7A0A087X1C5 515 aa11.64□□□□□ -0.55
COPB1-201ENST00000249923 ADAMTS3O15072 1205 aa11.64□□□□□ -0.55
COPB1-201ENST00000249923 RRP12Q5JTH9 1297 aaKnown RBP11.64□□□□□ -0.55
COPB1-201ENST00000249923 CDKL5O76039 1030 aa11.64□□□□□ -0.55
COPB1-201ENST00000249923 GSDMDP57764 484 aa11.64□□□□□ -0.55
COPB1-201ENST00000249923 DMTNQ08495 405 aa11.64□□□□□ -0.55
COPB1-201ENST00000249923 SEC23AQ15436 765 aa11.64□□□□□ -0.55
COPB1-201ENST00000249923 CCDC93Q567U6 631 aa11.64□□□□□ -0.55
COPB1-201ENST00000249923 SLC4A4Q9Y6R1 1079 aa11.64□□□□□ -0.55
COPB1-201ENST00000249923 hCG_1642624A0A1W2PR95 340 aa11.63□□□□□ -0.55
COPB1-201ENST00000249923 CHRNDQ07001 517 aa11.63□□□□□ -0.55
COPB1-201ENST00000249923 FUT2Q10981 343 aa11.63□□□□□ -0.55
COPB1-201ENST00000249923 PKN1Q16512 942 aa11.63□□□□□ -0.55
COPB1-201ENST00000249923 SMIM5Q71RC9 77 aa11.63□□□□□ -0.55
COPB1-201ENST00000249923 CRACR2BQ8N4Y2 399 aaPredicted RBP11.63□□□□□ -0.55
COPB1-201ENST00000249923 SLC5A1P13866 664 aa11.63□□□□□ -0.55
COPB1-201ENST00000249923 MAP3K12Q12852 859 aa11.63□□□□□ -0.55
COPB1-201ENST00000249923 TRIM65Q6PJ69 517 aa11.63□□□□□ -0.55
COPB1-201ENST00000249923 MFSD6Q6ZSS7 791 aa11.63□□□□□ -0.55
COPB1-201ENST00000249923 SLC51AQ86UW1 340 aa11.63□□□□□ -0.55
COPB1-201ENST00000249923 L2HGDHQ9H9P8 463 aa11.63□□□□□ -0.55
COPB1-201ENST00000249923 ZNF446Q9NWS9 450 aa11.63□□□□□ -0.55
COPB1-201ENST00000249923 DLEC1Q9Y238 1755 aa11.63□□□□□ -0.55
COPB1-201ENST00000249923 COL22A1Q8NFW1 1626 aaPredicted RBP11.63□□□□□ -0.55
COPB1-201ENST00000249923 CUTAO60888 179 aa11.63□□□□□ -0.55
COPB1-201ENST00000249923 SARSP49591 514 aaKnown RBP11.63□□□□□ -0.55
COPB1-201ENST00000249923 MYL5Q02045 173 aa11.63□□□□□ -0.55
COPB1-201ENST00000249923 SSRP1Q08945 709 aaKnown RBP11.63□□□□□ -0.55
COPB1-201ENST00000249923 ELF2Q15723 593 aa11.63□□□□□ -0.55
COPB1-201ENST00000249923 NPY5RQ15761 445 aa11.63□□□□□ -0.55
COPB1-201ENST00000249923 ACSBG1Q96GR2 724 aa11.63□□□□□ -0.55
COPB1-201ENST00000249923 RIOK1Q9BRS2 568 aaKnown RBP11.63□□□□□ -0.55
COPB1-201ENST00000249923 MAN1B1Q9UKM7 699 aa11.63□□□□□ -0.55
COPB1-201ENST00000249923 COL5A3P25940 1745 aaPredicted RBP11.63□□□□□ -0.55
COPB1-201ENST00000249923 NRAPQ86VF7 1730 aa11.63□□□□□ -0.55
COPB1-201ENST00000249923 MYH13Q9UKX3 1938 aa11.63□□□□□ -0.55
COPB1-201ENST00000249923 PTPREP23469 700 aa11.62□□□□□ -0.55
COPB1-201ENST00000249923 NT5DC1Q5TFE4 455 aa11.62□□□□□ -0.55
COPB1-201ENST00000249923 FBXO38Q6PIJ6 1188 aa11.62□□□□□ -0.55
COPB1-201ENST00000249923 ZNF804BA4D1E1 1349 aa11.62□□□□□ -0.55
COPB1-201ENST00000249923 ACTN4O43707 911 aaKnown RBP11.62□□□□□ -0.55
COPB1-201ENST00000249923 ZNF18P17022 549 aa11.62□□□□□ -0.55
COPB1-201ENST00000249923 SFPQP23246 707 aaKnown RBP eCLIP11.62□□□□□ -0.55
COPB1-201ENST00000249923 KLRK1P26718 216 aa11.62□□□□□ -0.55
COPB1-201ENST00000249923 GYG1P46976 350 aa11.62□□□□□ -0.55
COPB1-201ENST00000249923 SYT10Q6XYQ8 523 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms