RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 CUTAO60888 179 aa13.75□□□□□ -0.21
SEC61A1-201ENST00000243253 FGFR2P21802 821 aa13.75□□□□□ -0.21
SEC61A1-201ENST00000243253 CYP2C19P33261 490 aa13.75□□□□□ -0.21
SEC61A1-201ENST00000243253 UBASH3AP57075 661 aa13.75□□□□□ -0.21
SEC61A1-201ENST00000243253 MORC3Q14149 939 aa13.75□□□□□ -0.21
SEC61A1-201ENST00000243253 WDR24Q96S15 920 aa13.75□□□□□ -0.21
SEC61A1-201ENST00000243253 MYH8P13535 1937 aa13.75□□□□□ -0.21
SEC61A1-201ENST00000243253 TULP1O00294 542 aaPredicted RBP13.75□□□□□ -0.21
SEC61A1-201ENST00000243253 LIFRP42702 1097 aa13.75□□□□□ -0.21
SEC61A1-201ENST00000243253 NUP133Q8WUM0 1156 aa13.75□□□□□ -0.21
SEC61A1-201ENST00000243253 STRBPQ96SI9 672 aaKnown RBP13.75□□□□□ -0.21
SEC61A1-201ENST00000243253 TMOD3Q9NYL9 352 aa13.75□□□□□ -0.21
SEC61A1-201ENST00000243253 TRMT112Q9UI30 125 aaKnown RBP13.75□□□□□ -0.21
SEC61A1-201ENST00000243253 PRR29P0C7W0 189 aa13.75□□□□□ -0.21
SEC61A1-201ENST00000243253 PBX1P40424 430 aa13.75□□□□□ -0.21
SEC61A1-201ENST00000243253 MIGA1Q8NAN2 632 aa13.75□□□□□ -0.21
SEC61A1-201ENST00000243253 TEX13AQ9BXU3 409 aaPredicted RBP13.75□□□□□ -0.21
SEC61A1-201ENST00000243253 MAN1B1Q9UKM7 699 aa13.75□□□□□ -0.21
SEC61A1-201ENST00000243253 CICQ96RK0 1608 aaPredicted RBP13.74□□□□□ -0.21
SEC61A1-201ENST00000243253 TBC1D8O95759 1140 aa13.74□□□□□ -0.21
SEC61A1-201ENST00000243253 METAP2P50579 478 aaKnown RBP eCLIP13.74□□□□□ -0.213e-7■■■■□ 19.7
SEC61A1-201ENST00000243253 UTP14AQ9BVJ6 771 aaKnown RBP13.74□□□□□ -0.21
SEC61A1-201ENST00000243253 PPP2R2CQ9Y2T4 447 aa13.74□□□□□ -0.21
SEC61A1-201ENST00000243253 MRFAP1Q9Y605 127 aa13.74□□□□□ -0.21
SEC61A1-201ENST00000243253 EFCAB8A8MWE9 144 aa13.74□□□□□ -0.21
SEC61A1-201ENST00000243253 ACTN4O43707 911 aaKnown RBP13.74□□□□□ -0.21
SEC61A1-201ENST00000243253 FMNL1O95466 1100 aaPredicted RBP13.74□□□□□ -0.21
SEC61A1-201ENST00000243253 NR1I3Q14994 352 aa13.74□□□□□ -0.21
SEC61A1-201ENST00000243253 SYNE3Q6ZMZ3 975 aa13.74□□□□□ -0.21
SEC61A1-201ENST00000243253 TOGARAM2Q6ZUX3 1019 aa13.74□□□□□ -0.21
SEC61A1-201ENST00000243253 PDILTQ8N807 584 aa13.74□□□□□ -0.21
SEC61A1-201ENST00000243253 GTF2E1P29083 439 aaPredicted RBP13.73□□□□□ -0.21
SEC61A1-201ENST00000243253 ARHGAP29Q52LW3 1261 aa13.73□□□□□ -0.21
SEC61A1-201ENST00000243253 TMEM87BQ96K49 555 aa13.73□□□□□ -0.21
SEC61A1-201ENST00000243253 DNAI1Q9UI46 699 aa13.73□□□□□ -0.21
SEC61A1-201ENST00000243253 KCNH3Q9ULD8 1083 aa13.73□□□□□ -0.21
SEC61A1-201ENST00000243253 WWC3Q9ULE0 1092 aa13.73□□□□□ -0.21
SEC61A1-201ENST00000243253 PTPREP23469 700 aa13.73□□□□□ -0.21
SEC61A1-201ENST00000243253 LRRFIP1Q32MZ4 808 aaKnown RBP13.73□□□□□ -0.21
SEC61A1-201ENST00000243253 GREM2Q9H772 168 aa13.73□□□□□ -0.21
SEC61A1-201ENST00000243253 ZSWIM5Q9P217 1185 aa13.73□□□□□ -0.21
SEC61A1-201ENST00000243253 B4E1Z4 1266 aa13.73□□□□□ -0.21
SEC61A1-201ENST00000243253 ARHGAP6O43182 974 aa13.73□□□□□ -0.21
SEC61A1-201ENST00000243253 MMP1P03956 469 aa13.73□□□□□ -0.21
SEC61A1-201ENST00000243253 IFIT5Q13325 482 aaKnown RBP13.73□□□□□ -0.21
SEC61A1-201ENST00000243253 SCN7AQ01118 1682 aa13.73□□□□□ -0.21
SEC61A1-201ENST00000243253 FECHP22830 423 aa13.72□□□□□ -0.21
SEC61A1-201ENST00000243253 BMS1Q14692 1282 aaKnown RBP13.72□□□□□ -0.21
SEC61A1-201ENST00000243253 HLFQ16534 295 aa13.72□□□□□ -0.21
SEC61A1-201ENST00000243253 SLC9C2Q5TAH2 1124 aa13.72□□□□□ -0.21
SEC61A1-201ENST00000243253 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.72□□□□□ -0.21
SEC61A1-201ENST00000243253 ZNF532Q9HCE3 1301 aa13.72□□□□□ -0.21
SEC61A1-201ENST00000243253 DUOX1Q9NRD9 1551 aa13.72□□□□□ -0.21
SEC61A1-201ENST00000243253 NOSTRINQ8IVI9 506 aa13.72□□□□□ -0.21
SEC61A1-201ENST00000243253 ZNF579Q8NAF0 562 aaKnown RBP13.72□□□□□ -0.21
SEC61A1-201ENST00000243253 A0A087X0B3 334 aa13.72□□□□□ -0.21
SEC61A1-201ENST00000243253 MINDY4BA8MYZ0 360 aa13.72□□□□□ -0.21
SEC61A1-201ENST00000243253 STX10O60499 249 aa13.72□□□□□ -0.21
SEC61A1-201ENST00000243253 PDE6AP16499 860 aa13.72□□□□□ -0.21
SEC61A1-201ENST00000243253 IFNAR1P17181 557 aa13.72□□□□□ -0.21
SEC61A1-201ENST00000243253 SH3RF1Q7Z6J0 888 aa13.72□□□□□ -0.21
SEC61A1-201ENST00000243253 ENOX1Q8TC92 643 aaKnown RBP13.72□□□□□ -0.21
SEC61A1-201ENST00000243253 EPC1Q9H2F5 836 aa13.72□□□□□ -0.21
SEC61A1-201ENST00000243253 LAMB1P07942 1786 aa13.72□□□□□ -0.21
SEC61A1-201ENST00000243253 A0A1B0GTH6 734 aa13.71□□□□□ -0.21
SEC61A1-201ENST00000243253 TULP2O00295 520 aa13.71□□□□□ -0.21
SEC61A1-201ENST00000243253 TRDNQ13061 729 aa13.71□□□□□ -0.21
SEC61A1-201ENST00000243253 KIF6Q6ZMV9 814 aa13.71□□□□□ -0.21
SEC61A1-201ENST00000243253 SLC4A9Q96Q91 983 aa13.71□□□□□ -0.21
SEC61A1-201ENST00000243253 SRRTQ9BXP5 876 aaKnown RBP13.71□□□□□ -0.21
SEC61A1-201ENST00000243253 NLRP10Q86W26 655 aa13.71□□□□□ -0.21
SEC61A1-201ENST00000243253 CBFA2T2O43439 604 aa13.71□□□□□ -0.22
SEC61A1-201ENST00000243253 FAM182BQ5T319 152 aa13.71□□□□□ -0.22
SEC61A1-201ENST00000243253 A0A0U1RQJ8 604 aa13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 ATP8B1O43520 1251 aa13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 PDE8BO95263 885 aa13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 ITGA6P23229 1130 aa13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 PHKA1P46020 1223 aa13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 CCDC102BQ68D86 513 aa13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 GIGYF2Q6Y7W6 1299 aaKnown RBP13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 ATRIPQ8WXE1 791 aa13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 MRPL44Q9H9J2 332 aaKnown RBP13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 BTG4Q9NY30 223 aa13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 GSG1L2A8MUP6 293 aa13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 BTBD18B2RXH4 712 aa13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 CCP110O43303 1012 aa13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 CUL4BQ13620 913 aa13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 TAF3Q5VWG9 929 aa13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 CC2D1AQ6P1N0 951 aaPredicted RBP13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 USP49Q70CQ1 688 aa13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 KRI1Q8N9T8 703 aaKnown RBP13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 MPHOSPH8Q99549 860 aa13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 CARD6Q9BX69 1037 aa13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 BAZ2AQ9UIF9 1905 aaKnown RBP13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 CDKL5O76039 1030 aa13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 POSTNQ15063 836 aa13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 ZNF771Q7L3S4 317 aaPredicted RBP13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 FOXP1Q9H334 677 aaPredicted RBP13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 KIAA1551Q9HCM1 1747 aa13.7□□□□□ -0.22
SEC61A1-201ENST00000243253 ZBTB43O43298 467 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms