RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 NYXQ9GZU5 481 aa22.78■■□□□ 1.24
HOXC13-201ENST00000243056 SNRKQ9NRH2 765 aa22.78■■□□□ 1.24
HOXC13-201ENST00000243056 TFIP11Q9UBB9 837 aaKnown RBP22.78■■□□□ 1.24
HOXC13-201ENST00000243056 FAN1Q9Y2M0 1017 aa22.78■■□□□ 1.24
HOXC13-201ENST00000243056 A0A087WUV0 522 aaPredicted RBP22.78■■□□□ 1.24
HOXC13-201ENST00000243056 KCNV1Q6PIU1 500 aa22.78■■□□□ 1.24
HOXC13-201ENST00000243056 RPAINQ86UA6 219 aa22.78■■□□□ 1.24
HOXC13-201ENST00000243056 SCP2P22307 547 aa22.77■■□□□ 1.24
HOXC13-201ENST00000243056 MNAT1P51948 309 aa22.77■■□□□ 1.24
HOXC13-201ENST00000243056 NBPF20Q3BBV1 942 aa22.77■■□□□ 1.24
HOXC13-201ENST00000243056 LRCH2Q5VUJ6 765 aa22.77■■□□□ 1.24
HOXC13-201ENST00000243056 XAGE2Q96GT9 111 aa22.77■■□□□ 1.24
HOXC13-201ENST00000243056 PGBD1Q96JS3 809 aa22.77■■□□□ 1.24
HOXC13-201ENST00000243056 SPATA32Q96LK8 384 aa22.77■■□□□ 1.24
HOXC13-201ENST00000243056 SLC10A5Q5PT55 438 aa22.77■■□□□ 1.24
HOXC13-201ENST00000243056 RSRC2Q7L4I2 434 aaKnown RBP22.77■■□□□ 1.24
HOXC13-201ENST00000243056 VGLL2Q8N8G2 317 aa22.77■■□□□ 1.24
HOXC13-201ENST00000243056 LEO1Q8WVC0 666 aaPredicted RBP22.77■■□□□ 1.24
HOXC13-201ENST00000243056 POLRMTO00411 1230 aaKnown RBP22.76■■□□□ 1.23
HOXC13-201ENST00000243056 KCNJ6P48051 423 aa22.76■■□□□ 1.23
HOXC13-201ENST00000243056 SF3B2Q13435 895 aaKnown RBP22.76■■□□□ 1.23
HOXC13-201ENST00000243056 SCARF1Q14162 830 aa22.76■■□□□ 1.23
HOXC13-201ENST00000243056 MAP9Q49MG5 647 aa22.76■■□□□ 1.23
HOXC13-201ENST00000243056 RAI14Q9P0K7 980 aa22.76■■□□□ 1.23
HOXC13-201ENST00000243056 BECN2A8MW95 431 aa22.76■■□□□ 1.23
HOXC13-201ENST00000243056 SF3B3Q15393 1217 aaKnown RBP22.76■■□□□ 1.23
HOXC13-201ENST00000243056 BICD2Q8TD16 824 aa22.76■■□□□ 1.23
HOXC13-201ENST00000243056 GPATCH3Q96I76 525 aa22.76■■□□□ 1.23
HOXC13-201ENST00000243056 SLC15A2Q16348 729 aa22.75■■□□□ 1.23
HOXC13-201ENST00000243056 DDX46Q7L014 1031 aaKnown RBP22.75■■□□□ 1.23
HOXC13-201ENST00000243056 PDE8BO95263 885 aa22.74■■□□□ 1.23
HOXC13-201ENST00000243056 HNRNPH1P31943 449 aaKnown RBP22.74■■□□□ 1.23
HOXC13-201ENST00000243056 IGHMBP2P38935 993 aaKnown RBP22.74■■□□□ 1.23
HOXC13-201ENST00000243056 CCDC150Q8NCX0 1101 aa22.74■■□□□ 1.23
HOXC13-201ENST00000243056 CNKSR2Q8WXI2 1034 aa22.74■■□□□ 1.23
HOXC13-201ENST00000243056 ZNF609O15014 1411 aa22.74■■□□□ 1.23
HOXC13-201ENST00000243056 PPP1R12AO14974 1030 aaPredicted RBP22.74■■□□□ 1.23
HOXC13-201ENST00000243056 MAP2K1Q02750 393 aaPredicted RBP22.74■■□□□ 1.23
HOXC13-201ENST00000243056 STX1AQ16623 288 aa22.74■■□□□ 1.23
HOXC13-201ENST00000243056 IMPACTQ9P2X3 320 aa22.74■■□□□ 1.23
HOXC13-201ENST00000243056 MMP10P09238 476 aa22.73■■□□□ 1.23
HOXC13-201ENST00000243056 CHRNDQ07001 517 aa22.73■■□□□ 1.23
HOXC13-201ENST00000243056 MCM6Q14566 821 aa22.73■■□□□ 1.23
HOXC13-201ENST00000243056 AOX1Q06278 1338 aa22.73■■□□□ 1.23
HOXC13-201ENST00000243056 TMC6Q7Z403 805 aa22.73■■□□□ 1.23
HOXC13-201ENST00000243056 ANKRD18AQ8IVF6 992 aa22.73■■□□□ 1.23
HOXC13-201ENST00000243056 SCAND2PQ9GZW5 306 aaPredicted RBP22.73■■□□□ 1.23
HOXC13-201ENST00000243056 SPEF2Q9C093 1822 aa22.73■■□□□ 1.23
HOXC13-201ENST00000243056 SFPQP23246 707 aaKnown RBP eCLIP22.72■■□□□ 1.23
HOXC13-201ENST00000243056 LARP1BQ659C4 914 aaKnown RBP22.72■■□□□ 1.23
HOXC13-201ENST00000243056 FAM43BQ6ZT52 329 aaPredicted RBP22.72■■□□□ 1.23
HOXC13-201ENST00000243056 TNRC6CQ9HCJ0 1690 aaKnown RBP22.72■■□□□ 1.23
HOXC13-201ENST00000243056 BAG6P46379 1132 aa22.72■■□□□ 1.23
HOXC13-201ENST00000243056 PPP2R3AQ06190 1150 aa22.72■■□□□ 1.23
HOXC13-201ENST00000243056 CNTROBQ8N137 903 aa22.72■■□□□ 1.23
HOXC13-201ENST00000243056 AOPEPQ8N6M6 819 aa22.72■■□□□ 1.23
HOXC13-201ENST00000243056 NECAB1Q8N987 351 aa22.72■■□□□ 1.23
HOXC13-201ENST00000243056 PPFIA4O75335 1185 aa22.71■■□□□ 1.23
HOXC13-201ENST00000243056 FKBP4Q02790 459 aaKnown RBP eCLIP22.71■■□□□ 1.23
HOXC13-201ENST00000243056 TRDNQ13061 729 aa22.71■■□□□ 1.23
HOXC13-201ENST00000243056 CNNM3Q8NE01 707 aa22.71■■□□□ 1.23
HOXC13-201ENST00000243056 IQSEC3Q9UPP2 1182 aaPredicted RBP22.71■■□□□ 1.23
HOXC13-201ENST00000243056 CCDC151A5D8V7 595 aa22.71■■□□□ 1.23
HOXC13-201ENST00000243056 ERLIN2O94905 339 aa22.71■■□□□ 1.23
HOXC13-201ENST00000243056 ATP5JP18859 108 aa22.71■■□□□ 1.23
HOXC13-201ENST00000243056 VPS53Q5VIR6 699 aa22.71■■□□□ 1.23
HOXC13-201ENST00000243056 FBXW10Q5XX13 1052 aa22.71■■□□□ 1.23
HOXC13-201ENST00000243056 RABGGTAQ92696 567 aa22.71■■□□□ 1.23
HOXC13-201ENST00000243056 FAM227BQ96M60 508 aa22.71■■□□□ 1.23
HOXC13-201ENST00000243056 RGL2O15211 777 aa22.7■■□□□ 1.22
HOXC13-201ENST00000243056 PHKA1P46020 1223 aa22.7■■□□□ 1.22
HOXC13-201ENST00000243056 LIG3P49916 1009 aa22.7■■□□□ 1.22
HOXC13-201ENST00000243056 RPS8P62241 208 aaKnown RBP22.7■■□□□ 1.22
HOXC13-201ENST00000243056 CDC5LQ99459 802 aaKnown RBP22.7■■□□□ 1.22
HOXC13-201ENST00000243056 COL24A1Q17RW2 1714 aa22.7■■□□□ 1.22
HOXC13-201ENST00000243056 EPB41L2O43491 1005 aaKnown RBP22.7■■□□□ 1.22
HOXC13-201ENST00000243056 FSD1Q9BTV5 496 aa22.69■■□□□ 1.22
HOXC13-201ENST00000243056 GPR108Q9NPR9 543 aa22.69■■□□□ 1.22
HOXC13-201ENST00000243056 MINPP1Q9UNW1 487 aa22.69■■□□□ 1.22
HOXC13-201ENST00000243056 HSP90B1P14625 803 aaKnown RBP22.69■■□□□ 1.22
HOXC13-201ENST00000243056 KLRK1P26718 216 aa22.69■■□□□ 1.22
HOXC13-201ENST00000243056 ME3Q16798 604 aa22.69■■□□□ 1.22
HOXC13-201ENST00000243056 ISM2Q6H9L7 571 aa22.69■■□□□ 1.22
HOXC13-201ENST00000243056 STK32BQ9NY57 414 aa22.69■■□□□ 1.22
HOXC13-201ENST00000243056 FBXO3Q9UK99 471 aa22.69■■□□□ 1.22
HOXC13-201ENST00000243056 IFIT1P09914 478 aaKnown RBP22.68■■□□□ 1.22
HOXC13-201ENST00000243056 MAP3K9P80192 1104 aa22.68■■□□□ 1.22
HOXC13-201ENST00000243056 BEND6Q5SZJ8 279 aaPredicted RBP22.68■■□□□ 1.22
HOXC13-201ENST00000243056 CPLX2Q6PUV4 134 aaKnown RBP22.68■■□□□ 1.22
HOXC13-201ENST00000243056 XPO4Q9C0E2 1151 aaKnown RBP22.68■■□□□ 1.22
HOXC13-201ENST00000243056 LSG1Q9H089 658 aaKnown RBP22.68■■□□□ 1.22
HOXC13-201ENST00000243056 MRFAP1Q9Y605 127 aa22.68■■□□□ 1.22
HOXC13-201ENST00000243056 LAMB2P55268 1798 aa22.68■■□□□ 1.22
HOXC13-201ENST00000243056 BCAMP50895 628 aa22.68■■□□□ 1.22
HOXC13-201ENST00000243056 TTC39AQ5SRH9 613 aa22.68■■□□□ 1.22
HOXC13-201ENST00000243056 NLGN1Q8N2Q7 840 aa22.68■■□□□ 1.22
HOXC13-201ENST00000243056 CASZ1Q86V15 1759 aa22.67■■□□□ 1.22
HOXC13-201ENST00000243056 TXLNAP40222 546 aa22.67■■□□□ 1.22
HOXC13-201ENST00000243056 BRD3Q15059 726 aa22.67■■□□□ 1.22
HOXC13-201ENST00000243056 FAM177A1Q8N128 213 aaPredicted RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms