RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 ME3Q16798 604 aa12.97□□□□□ -0.33
NOD1-201ENST00000222823 FAM107BQ9H098 131 aa12.97□□□□□ -0.33
NOD1-201ENST00000222823 PTPRUQ92729 1446 aa12.97□□□□□ -0.33
NOD1-201ENST00000222823 LMTK3Q96Q04 1460 aa12.96□□□□□ -0.33
NOD1-201ENST00000222823 SYT10Q6XYQ8 523 aa12.96□□□□□ -0.33
NOD1-201ENST00000222823 SV2BQ7L1I2 683 aa12.96□□□□□ -0.33
NOD1-201ENST00000222823 LMBR1Q8WVP7 490 aa12.96□□□□□ -0.33
NOD1-201ENST00000222823 PKNOX2Q96KN3 472 aa12.96□□□□□ -0.33
NOD1-201ENST00000222823 SLAIN2Q9P270 581 aa12.96□□□□□ -0.33
NOD1-201ENST00000222823 PROSER3Q2NL68 480 aa12.96□□□□□ -0.33
NOD1-201ENST00000222823 PIK3AP1Q6ZUJ8 805 aa12.96□□□□□ -0.33
NOD1-201ENST00000222823 CHAMP1Q96JM3 812 aa12.96□□□□□ -0.33
NOD1-201ENST00000222823 TRERF1Q96PN7 1200 aa12.96□□□□□ -0.33
NOD1-201ENST00000222823 FERMT1Q9BQL6 677 aa12.96□□□□□ -0.33
NOD1-201ENST00000222823 TRAF5O00463 557 aa12.96□□□□□ -0.34
NOD1-201ENST00000222823 ZNF569Q5MCW4 686 aa12.96□□□□□ -0.34
NOD1-201ENST00000222823 MYL10Q9BUA6 226 aa12.96□□□□□ -0.34
NOD1-201ENST00000222823 GPCPD1Q9NPB8 672 aa12.96□□□□□ -0.34
NOD1-201ENST00000222823 ZNF532Q9HCE3 1301 aa12.96□□□□□ -0.34
NOD1-201ENST00000222823 ADAMTS13Q76LX8 1427 aa12.96□□□□□ -0.34
NOD1-201ENST00000222823 B4DLN1 442 aa12.96□□□□□ -0.34
NOD1-201ENST00000222823 RPL13P26373 211 aaKnown RBP12.96□□□□□ -0.34
NOD1-201ENST00000222823 TBC1D8BQ0IIM8 1120 aa12.96□□□□□ -0.34
NOD1-201ENST00000222823 PLS1Q14651 629 aa12.96□□□□□ -0.34
NOD1-201ENST00000222823 PPP2R5BQ15173 497 aa12.96□□□□□ -0.34
NOD1-201ENST00000222823 GOLGA1Q92805 767 aa12.96□□□□□ -0.34
NOD1-201ENST00000222823 INCENPQ9NQS7 918 aa12.96□□□□□ -0.34
NOD1-201ENST00000222823 AATFQ9NY61 560 aaKnown RBP eCLIP12.96□□□□□ -0.34
NOD1-201ENST00000222823 GGA1Q9UJY5 639 aa12.96□□□□□ -0.34
NOD1-201ENST00000222823 MTMR6Q9Y217 621 aa12.96□□□□□ -0.34
NOD1-201ENST00000222823 ERVV-2B6SEH9 535 aa12.95□□□□□ -0.34
NOD1-201ENST00000222823 POLR2DO15514 142 aaKnown RBP12.95□□□□□ -0.34
NOD1-201ENST00000222823 DDIT3P35638 169 aa12.95□□□□□ -0.34
NOD1-201ENST00000222823 KRT40Q6A162 431 aa12.95□□□□□ -0.34
NOD1-201ENST00000222823 CCDC65Q8IXS2 484 aa12.95□□□□□ -0.34
NOD1-201ENST00000222823 SPATA5Q8NB90 893 aa12.95□□□□□ -0.34
NOD1-201ENST00000222823 MAP4K1Q92918 833 aa12.95□□□□□ -0.34
NOD1-201ENST00000222823 PHKBQ93100 1093 aa12.95□□□□□ -0.34
NOD1-201ENST00000222823 CLSTN2Q9H4D0 955 aa12.95□□□□□ -0.34
NOD1-201ENST00000222823 ADGRL3Q9HAR2 1447 aa12.95□□□□□ -0.34
NOD1-201ENST00000222823 A0A0D9SFI3 127 aa12.95□□□□□ -0.34
NOD1-201ENST00000222823 JAK2O60674 1132 aa12.95□□□□□ -0.34
NOD1-201ENST00000222823 PHKG2P15735 406 aa12.95□□□□□ -0.34
NOD1-201ENST00000222823 PPP1R2P41236 205 aa12.95□□□□□ -0.34
NOD1-201ENST00000222823 CCDC155Q8N6L0 562 aa12.95□□□□□ -0.34
NOD1-201ENST00000222823 RGS22Q8NE09 1264 aa12.95□□□□□ -0.34
NOD1-201ENST00000222823 NAP1L4Q99733 375 aaKnown RBP12.95□□□□□ -0.34
NOD1-201ENST00000222823 BAG1Q99933 345 aaPredicted RBP12.95□□□□□ -0.34
NOD1-201ENST00000222823 HOMER2Q9NSB8 354 aa12.95□□□□□ -0.34
NOD1-201ENST00000222823 CUTAO60888 179 aa12.95□□□□□ -0.34
NOD1-201ENST00000222823 CCT6AP40227 531 aaKnown RBP12.95□□□□□ -0.34
NOD1-201ENST00000222823 MTX1Q13505 466 aa12.95□□□□□ -0.34
NOD1-201ENST00000222823 AKR1B15C9JRZ8 316 aaPredicted RBP12.94□□□□□ -0.34
NOD1-201ENST00000222823 ZNF500O60304 480 aaPredicted RBP12.94□□□□□ -0.34
NOD1-201ENST00000222823 TUBB4BP68371 445 aa12.94□□□□□ -0.34
NOD1-201ENST00000222823 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.94□□□□□ -0.34
NOD1-201ENST00000222823 IKBKGQ9Y6K9 419 aa12.94□□□□□ -0.34
NOD1-201ENST00000222823 ITSN1Q15811 1721 aa12.94□□□□□ -0.34
NOD1-201ENST00000222823 EIF6P56537 245 aaKnown RBP12.94□□□□□ -0.34
NOD1-201ENST00000222823 FCHSD1Q86WN1 690 aa12.94□□□□□ -0.34
NOD1-201ENST00000222823 CCDC24Q8N4L8 307 aa12.94□□□□□ -0.34
NOD1-201ENST00000222823 DSCC1Q9BVC3 393 aa12.94□□□□□ -0.34
NOD1-201ENST00000222823 COPRSQ9NQ92 184 aa12.94□□□□□ -0.34
NOD1-201ENST00000222823 ZBTB21Q9ULJ3 1066 aa12.94□□□□□ -0.34
NOD1-201ENST00000222823 MROH5Q6ZUA9 1318 aa12.94□□□□□ -0.34
NOD1-201ENST00000222823 NCAPD2Q15021 1401 aa12.94□□□□□ -0.34
NOD1-201ENST00000222823 ZNF202O95125 648 aa12.94□□□□□ -0.34
NOD1-201ENST00000222823 PDE4DQ08499 809 aa12.94□□□□□ -0.34
NOD1-201ENST00000222823 SPECC1LQ69YQ0 1117 aa12.94□□□□□ -0.34
NOD1-201ENST00000222823 CDC37L1Q7L3B6 337 aa12.94□□□□□ -0.34
NOD1-201ENST00000222823 E7EWF7 191 aa12.94□□□□□ -0.34
NOD1-201ENST00000222823 BACH1O14867 736 aa12.94□□□□□ -0.34
NOD1-201ENST00000222823 CYP2E1P05181 493 aaPredicted RBP12.94□□□□□ -0.34
NOD1-201ENST00000222823 VPS16Q9H269 839 aa12.94□□□□□ -0.34
NOD1-201ENST00000222823 SH2D4AQ9H788 454 aa12.94□□□□□ -0.34
NOD1-201ENST00000222823 MAPK8IP1Q9UQF2 711 aa12.94□□□□□ -0.34
NOD1-201ENST00000222823 CTDSPL2Q05D32 466 aa12.93□□□□□ -0.34
NOD1-201ENST00000222823 TTC38Q5R3I4 469 aa12.93□□□□□ -0.34
NOD1-201ENST00000222823 NRKQ7Z2Y5 1582 aa12.93□□□□□ -0.34
NOD1-201ENST00000222823 CAPZA3Q96KX2 299 aa12.93□□□□□ -0.34
NOD1-201ENST00000222823 TPCN1Q9ULQ1 816 aa12.93□□□□□ -0.34
NOD1-201ENST00000222823 CERS3Q8IU89 383 aa12.93□□□□□ -0.34
NOD1-201ENST00000222823 IGSF22Q8N9C0 903 aa12.93□□□□□ -0.34
NOD1-201ENST00000222823 MLKLQ8NB16 471 aa12.93□□□□□ -0.34
NOD1-201ENST00000222823 TXKP42681 527 aa12.93□□□□□ -0.34
NOD1-201ENST00000222823 RPS8P62241 208 aaKnown RBP12.93□□□□□ -0.34
NOD1-201ENST00000222823 SP4Q02446 784 aa12.93□□□□□ -0.34
NOD1-201ENST00000222823 FAM98CQ17RN3 349 aaKnown RBP12.93□□□□□ -0.34
NOD1-201ENST00000222823 ADCK5Q3MIX3 580 aa12.93□□□□□ -0.34
NOD1-201ENST00000222823 CCDC122Q5T0U0 273 aa12.93□□□□□ -0.34
NOD1-201ENST00000222823 DDX12PQ92771 950 aa12.93□□□□□ -0.34
NOD1-201ENST00000222823 NF2P35240 595 aa12.92□□□□□ -0.34
NOD1-201ENST00000222823 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.92□□□□□ -0.34
NOD1-201ENST00000222823 NOC4LQ9BVI4 516 aaKnown RBP12.92□□□□□ -0.34
NOD1-201ENST00000222823 POLD1P28340 1107 aa12.92□□□□□ -0.34
NOD1-201ENST00000222823 AKNAD1Q5T1N1 836 aa12.92□□□□□ -0.34
NOD1-201ENST00000222823 RASAL2Q9UJF2 1139 aa12.92□□□□□ -0.34
NOD1-201ENST00000222823 TUBBP07437 444 aa12.92□□□□□ -0.34
NOD1-201ENST00000222823 PLCB3Q01970 1234 aa12.92□□□□□ -0.34
NOD1-201ENST00000222823 DCAF17Q5H9S7 520 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms