RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 TOP1P11387 765 aaKnown RBP19.85■□□□□ 0.77
USB1-201ENST00000219281 ARID4AP29374 1257 aaPredicted RBP19.85■□□□□ 0.77
USB1-201ENST00000219281 ETF1P62495 437 aaKnown RBP19.85■□□□□ 0.77
USB1-201ENST00000219281 PDE4BQ07343 736 aa19.85■□□□□ 0.77
USB1-201ENST00000219281 ZNF771Q7L3S4 317 aaPredicted RBP19.85■□□□□ 0.77
USB1-201ENST00000219281 HELBQ8NG08 1087 aaPredicted RBP19.85■□□□□ 0.77
USB1-201ENST00000219281 TMX1Q9H3N1 280 aa19.85■□□□□ 0.77
USB1-201ENST00000219281 CCDC87Q9NVE4 849 aa19.85■□□□□ 0.77
USB1-201ENST00000219281 TACC3Q9Y6A5 838 aa19.85■□□□□ 0.77
USB1-201ENST00000219281 SLIT2O94813 1529 aa19.85■□□□□ 0.77
USB1-201ENST00000219281 BMP6P22004 513 aa19.85■□□□□ 0.77
USB1-201ENST00000219281 IFNL3Q8IZI9 196 aa19.85■□□□□ 0.77
USB1-201ENST00000219281 KRI1Q8N9T8 703 aaKnown RBP19.85■□□□□ 0.77
USB1-201ENST00000219281 EPB41L4AQ9HCS5 686 aaPredicted RBP19.85■□□□□ 0.77
USB1-201ENST00000219281 BTBD18B2RXH4 712 aa19.84■□□□□ 0.77
USB1-201ENST00000219281 PATL2C9JE40 543 aaKnown RBP19.84■□□□□ 0.77
USB1-201ENST00000219281 PDE8AO60658 829 aa19.84■□□□□ 0.77
USB1-201ENST00000219281 UQCRFS1P1P0C7P4 283 aa19.84■□□□□ 0.77
USB1-201ENST00000219281 GUCY1A2P33402 732 aa19.84■□□□□ 0.77
USB1-201ENST00000219281 LIFRP42702 1097 aa19.84■□□□□ 0.77
USB1-201ENST00000219281 HSP90AA4PQ58FG1 418 aa19.84■□□□□ 0.77
USB1-201ENST00000219281 NOSTRINQ8IVI9 506 aa19.84■□□□□ 0.77
USB1-201ENST00000219281 STK11IPQ8N1F8 1099 aa19.84■□□□□ 0.77
USB1-201ENST00000219281 NAPBQ9H115 298 aa19.84■□□□□ 0.77
USB1-201ENST00000219281 ZNF446Q9NWS9 450 aa19.84■□□□□ 0.77
USB1-201ENST00000219281 FAM53CQ9NYF3 392 aa19.84■□□□□ 0.77
USB1-201ENST00000219281 FMNL1O95466 1100 aaPredicted RBP19.83■□□□□ 0.77
USB1-201ENST00000219281 ALX1Q15699 326 aa19.83■□□□□ 0.77
USB1-201ENST00000219281 SUSD4Q5VX71 490 aa19.83■□□□□ 0.77
USB1-201ENST00000219281 TOM1O60784 492 aa19.83■□□□□ 0.76
USB1-201ENST00000219281 MBD4O95243 580 aa19.83■□□□□ 0.76
USB1-201ENST00000219281 MDM2Q00987 491 aaPredicted RBP19.83■□□□□ 0.76
USB1-201ENST00000219281 TRIM65Q6PJ69 517 aa19.83■□□□□ 0.76
USB1-201ENST00000219281 REXO1L1PQ8IX06 675 aa19.83■□□□□ 0.76
USB1-201ENST00000219281 MAGEB6Q8N7X4 407 aa19.83■□□□□ 0.76
USB1-201ENST00000219281 ARMT1Q9H993 441 aa19.83■□□□□ 0.76
USB1-201ENST00000219281 KCNJ14Q9UNX9 436 aa19.83■□□□□ 0.76
USB1-201ENST00000219281 PHLPP2Q6ZVD8 1323 aa19.82■□□□□ 0.76
USB1-201ENST00000219281 STK36Q9NRP7 1315 aa19.82■□□□□ 0.76
USB1-201ENST00000219281 SLFN14P0C7P3 912 aa19.82■□□□□ 0.76
USB1-201ENST00000219281 H2AFXP16104 143 aaPredicted RBP19.82■□□□□ 0.76
USB1-201ENST00000219281 TOB1P50616 345 aaPredicted RBP19.82■□□□□ 0.76
USB1-201ENST00000219281 GRIN1Q05586 938 aa19.82■□□□□ 0.76
USB1-201ENST00000219281 INTS13Q9NVM9 706 aa19.82■□□□□ 0.76
USB1-201ENST00000219281 ZKSCAN3Q9BRR0 538 aa19.82■□□□□ 0.76
USB1-201ENST00000219281 MYO5AQ9Y4I1 1855 aaKnown RBP19.82■□□□□ 0.76
USB1-201ENST00000219281 ANKRD36CQ5JPF3 1778 aa19.81■□□□□ 0.76
USB1-201ENST00000219281 MYO1BO43795 1136 aa19.81■□□□□ 0.76
USB1-201ENST00000219281 CAMTA2O94983 1202 aa19.81■□□□□ 0.76
USB1-201ENST00000219281 MMP1P03956 469 aa19.81■□□□□ 0.76
USB1-201ENST00000219281 IFNAR1P17181 557 aa19.81■□□□□ 0.76
USB1-201ENST00000219281 PUM3Q15397 648 aaKnown RBP19.81■□□□□ 0.76
USB1-201ENST00000219281 RRP12Q5JTH9 1297 aaKnown RBP19.81■□□□□ 0.76
USB1-201ENST00000219281 DIS3L2Q8IYB7 885 aaKnown RBP19.81■□□□□ 0.76
USB1-201ENST00000219281 CCDC82Q8N4S0 544 aa19.81■□□□□ 0.76
USB1-201ENST00000219281 SPATA5Q8NB90 893 aa19.81■□□□□ 0.76
USB1-201ENST00000219281 LPIN2Q92539 896 aa19.81■□□□□ 0.76
USB1-201ENST00000219281 WASF1Q92558 559 aa19.81■□□□□ 0.76
USB1-201ENST00000219281 MAN1B1Q9UKM7 699 aa19.81■□□□□ 0.76
USB1-201ENST00000219281 SAFBQ15424 915 aaKnown RBP eCLIP19.81■□□□□ 0.76
USB1-201ENST00000219281 ARHGAP29Q52LW3 1261 aa19.81■□□□□ 0.76
USB1-201ENST00000219281 AKNAD1Q5T1N1 836 aa19.81■□□□□ 0.76
USB1-201ENST00000219281 TOMM22Q9NS69 142 aa19.81■□□□□ 0.76
USB1-201ENST00000219281 SNAP23O00161 211 aa19.8■□□□□ 0.76
USB1-201ENST00000219281 FANCGO15287 622 aa19.8■□□□□ 0.76
USB1-201ENST00000219281 PRKAB2O43741 272 aa19.8■□□□□ 0.76
USB1-201ENST00000219281 PRR29P0C7W0 189 aa19.8■□□□□ 0.76
USB1-201ENST00000219281 POSTNQ15063 836 aa19.8■□□□□ 0.76
USB1-201ENST00000219281 MFSD6Q6ZSS7 791 aa19.8■□□□□ 0.76
USB1-201ENST00000219281 TMEM139Q8IV31 216 aa19.8■□□□□ 0.76
USB1-201ENST00000219281 SERTAD1Q9UHV2 236 aa19.8■□□□□ 0.76
USB1-201ENST00000219281 HOOK1Q9UJC3 728 aaKnown RBP19.8■□□□□ 0.76
USB1-201ENST00000219281 FBXO2Q9UK22 296 aaPredicted RBP19.8■□□□□ 0.76
USB1-201ENST00000219281 ECM29Q5VYK3 1845 aa19.8■□□□□ 0.76
USB1-201ENST00000219281 POLR2DO15514 142 aaKnown RBP19.79■□□□□ 0.76
USB1-201ENST00000219281 URI1O94763 535 aaPredicted RBP19.79■□□□□ 0.76
USB1-201ENST00000219281 FGFR2P21802 821 aa19.79■□□□□ 0.76
USB1-201ENST00000219281 MAP3K12Q12852 859 aa19.79■□□□□ 0.76
USB1-201ENST00000219281 CMTR1Q8N1G2 835 aaKnown RBP19.79■□□□□ 0.76
USB1-201ENST00000219281 PDILTQ8N807 584 aa19.79■□□□□ 0.76
USB1-201ENST00000219281 KRT23Q9C075 422 aa19.79■□□□□ 0.76
USB1-201ENST00000219281 CNNM2Q9H8M5 875 aa19.79■□□□□ 0.76
USB1-201ENST00000219281 MYH14Q7Z406 1995 aaKnown RBP19.79■□□□□ 0.76
USB1-201ENST00000219281 GSG1L2A8MUP6 293 aa19.79■□□□□ 0.76
USB1-201ENST00000219281 CLCN6P51797 869 aa19.79■□□□□ 0.76
USB1-201ENST00000219281 FMR1Q06787 632 aaKnown RBP eCLIP19.79■□□□□ 0.76
USB1-201ENST00000219281 TERF2Q15554 542 aa19.79■□□□□ 0.76
USB1-201ENST00000219281 FAM98CQ17RN3 349 aaKnown RBP19.79■□□□□ 0.76
USB1-201ENST00000219281 ELOA2Q8IYF1 753 aaPredicted RBP19.79■□□□□ 0.76
USB1-201ENST00000219281 FAM177A1Q8N128 213 aaPredicted RBP19.79■□□□□ 0.76
USB1-201ENST00000219281 ARHGAP6O43182 974 aa19.78■□□□□ 0.76
USB1-201ENST00000219281 ZSCAN12O43309 604 aa19.78■□□□□ 0.76
USB1-201ENST00000219281 CDK11BP21127 795 aaKnown RBP19.78■□□□□ 0.76
USB1-201ENST00000219281 PTPREP23469 700 aa19.78■□□□□ 0.76
USB1-201ENST00000219281 RASGRF1Q13972 1273 aa19.78■□□□□ 0.76
USB1-201ENST00000219281 RTN1Q16799 776 aa19.78■□□□□ 0.76
USB1-201ENST00000219281 ZNF827Q17R98 1081 aa19.78■□□□□ 0.76
USB1-201ENST00000219281 FCHSD1Q86WN1 690 aa19.78■□□□□ 0.76
USB1-201ENST00000219281 TRIM22Q8IYM9 498 aa19.78■□□□□ 0.76
USB1-201ENST00000219281 GRAMD1CQ8IYS0 662 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms