RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Smc6Q924W5 1097 aa18.22■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Psma7Q9Z2U0 248 aa18.22■□□□□ 0.51
Col17a1-202ENSMUST00000086923 PpardP35396 440 aa18.21■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Fgd4Q91ZT5 766 aa18.21■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Nde1Q9CZA6 344 aa18.21■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Nek11Q8C0Q4 628 aa18.21■□□□□ 0.51
Col17a1-202ENSMUST00000086923 RpainQ9CWY9 219 aa18.21■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Trim42Q9D2H5 723 aa18.21■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Ccdc124Q9D8X2 217 aaKnown RBP18.21■□□□□ 0.51
Col17a1-202ENSMUST00000086923 MarcksP26645 309 aaKnown RBP18.21■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Ano9P86044 747 aa18.21■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Kif9Q9WV04 790 aa18.21■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Mkrn3Q60764 544 aa18.21■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Prdm4Q80V63 803 aa18.21■□□□□ 0.51
Col17a1-202ENSMUST00000086923 RalgapbQ8BQZ4 1484 aa18.21■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Gm5936A2BG95 728 aa18.2■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Gm5640A3KG49 728 aa18.2■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Vwa3bJ9JI28 736 aa18.2■□□□□ 0.5
Col17a1-202ENSMUST00000086923 SpertQ32MG2 446 aa18.2■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Cul4bA2A432 970 aaKnown RBP18.2■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Palb2Q3U0P1 1104 aa18.2■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Pcyt1aP49586 367 aa18.2■□□□□ 0.5
Col17a1-202ENSMUST00000086923 PhexP70669 749 aa18.2■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Igf2bp2Q5SF07 592 aaKnown RBP18.2■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Slc35f6Q8VE96 372 aa18.2■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Rabgef1Q9JM13 491 aa18.2■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Zap70P43404 618 aa18.2■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Add3Q9QYB5 706 aaKnown RBP18.2■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Akr1c19G3X9Y6 323 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Csrnp1P59054 583 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Vps37dQ810I0 261 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Depdc1bQ8BH88 529 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Wdr60Q8C761 999 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Mylk2Q8VCR8 613 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Anapc4Q91W96 807 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Shroom4Q1W617 1475 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Klhl41A2AUC9 606 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Zc4h2Q68FG0 224 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 CntrobQ8CB62 887 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Tmem60Q8K174 133 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Tubgcp2Q921G8 905 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Hdac9Q99N13 588 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Slc1a4O35874 532 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Myo1aO88329 1043 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Senp1P59110 640 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Smg7Q5RJH6 1138 aaKnown RBP18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Arhgap30Q640N3 1101 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 SpopQ6ZWS8 374 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Nfe2l3Q9WTM4 660 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Mterf4Q8BVN4 346 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Dnajc3Q91YW3 504 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Cwc25Q9DBF7 416 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Pde3aQ9Z0X4 1141 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Arhgef2Q60875 985 aa18.19■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Arl8aQ8VEH3 186 aa18.18■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Hnrnph1O35737 449 aaKnown RBP18.18■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Vamp4O70480 141 aa18.18■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Tmem165P52875 323 aa18.18■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Champ1Q8K327 802 aaKnown RBP18.18■□□□□ 0.5
Col17a1-202ENSMUST00000086923 PdhbQ9D051 359 aa18.18■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Ppp1r9aH3BJD6 1292 aa18.18■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Xrcc6P23475 608 aa18.18■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Cdan1Q8CC12 1239 aa18.18■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Nkiras1Q8CEC5 192 aa18.18■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Asic2Q925H0 512 aa18.18■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Slc13a1Q9JHI4 594 aa18.18■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Tldc2A2ACG1 198 aa18.18■□□□□ 0.5
Col17a1-202ENSMUST00000086923 HpdP49429 393 aa18.18■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Nap1l4Q78ZA7 375 aaKnown RBP18.18■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Mrfap1Q9CQL7 125 aa18.18■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Coro7Q9D2V7 922 aa18.18■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Calr3Q9D9Q6 380 aa18.18■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Gja8P28236 440 aa18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Adam1aQ60813 791 aa18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Zranb3Q6NZP1 1069 aa18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Ppfia2Q8BSS9 1257 aa18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Txndc9Q9CQ79 226 aa18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Atp11aP98197 1187 aa18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Birc2Q62210 612 aa18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 RbsnQ80Y56 783 aa18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Lrrc2Q8VDB8 371 aa18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Sorbs3Q9R1Z8 733 aa18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Palm3A2TJV2 734 aa18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Stx8O88983 236 aa18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Faf1P54731 649 aa18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Pfkfb1P70266 471 aa18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Ccdc138Q0VF22 680 aa18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Fam83gQ5SWY7 812 aa18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Arl13bQ640N2 427 aa18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Sytl1Q99N80 567 aa18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Sec24cG3X972 1096 aaKnown RBP18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Kcnk16G5E845 292 aa18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Mettl5Q8K1A0 209 aa18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Satb2Q8VI24 733 aa18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 CactinQ9CS00 772 aaKnown RBP18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Acsl3Q9CZW4 720 aaKnown RBP18.17■□□□□ 0.5
Col17a1-202ENSMUST00000086923 AdarQ99MU3 1178 aaKnown RBP18.16■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Kif6E9PX57 802 aa18.16■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Neurog2P70447 263 aa18.16■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Mcm10Q0VBD2 885 aa18.16■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms