RNA–Protein interactions for RNA: ENSMUST00000008004.9

Ddx49-201, Transcript of Probable ATP-dependent RNA helicase DDX49, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx49, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49-201ENSMUST00000008004 Prr16A3KMN5 304 aa18.06■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Fam186bD3Z420 943 aa18.06■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Metap2O08663 478 aaKnown RBP18.06■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Cep131Q62036 1060 aa18.06■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Usp50Q6P8X6 390 aa18.06■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Aox1O54754 1333 aa18.05■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Map9Q3TRR0 646 aa18.05■□□□□ 0.48
Ddx49-201ENSMUST00000008004 NynrinQ5DTZ0 1840 aa18.05■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Stac3Q8BZ71 360 aa18.05■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Atxn7Q8R4I1 867 aa18.05■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Cep57l1Q8VDS7 400 aa18.05■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Rgs12Q8CGE9 1381 aa18.05■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Cyp2c68K7N6C2 491 aa18.05■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Myl3P09542 204 aa18.05■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Llgl2Q3TJ91 1027 aa18.05■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Lins1Q3U1D0 764 aa18.05■□□□□ 0.48
Ddx49-201ENSMUST00000008004 ZwintQ9CQU5 252 aa18.05■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Zmym2Q9CU65 1376 aa18.04■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Vmn2r68L7N2B3 851 aa18.04■□□□□ 0.48
Ddx49-201ENSMUST00000008004 TbcaP48428 108 aaKnown RBP18.04■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Gxylt1Q3UHH8 404 aa18.04■□□□□ 0.48
Ddx49-201ENSMUST00000008004 MyrflQ3UN70 904 aa18.04■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Tekt3Q6X6Z7 490 aa18.04■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Bag4Q8CI61 457 aa18.04■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Myh14Q6URW6 2000 aa18.04■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Glt1d1A4FUP9 346 aa18.04■□□□□ 0.48
Ddx49-201ENSMUST00000008004 FosbP13346 338 aa18.04■□□□□ 0.48
Ddx49-201ENSMUST00000008004 CnpP16330 420 aa18.04■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Ccdc93Q7TQK5 629 aa18.04■□□□□ 0.48
Ddx49-201ENSMUST00000008004 DpydQ8CHR6 1025 aa18.04■□□□□ 0.48
Ddx49-201ENSMUST00000008004 CerkQ8K4Q7 531 aa18.04■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Trim59Q922Y2 403 aa18.04■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Bcorl1A2AQH4 1781 aa18.03■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Gm20425E9Q035 978 aaKnown RBP18.03■□□□□ 0.48
Ddx49-201ENSMUST00000008004 SrprbP47758 269 aa18.03■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Tigd5Q499M4 642 aa18.03■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Zfp113Q8C689 439 aa18.03■□□□□ 0.48
Ddx49-201ENSMUST00000008004 OplahQ8K010 1288 aa18.03■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Ccdc47Q9D024 483 aaKnown RBP18.03■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Borcs6Q9D6W8 360 aa18.03■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Sall1Q9ER74 1322 aa18.03■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Ces1hD3Z298 562 aa18.02■□□□□ 0.48
Ddx49-201ENSMUST00000008004 CfhP06909 1234 aa18.02■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Fdx1P46656 188 aa18.02■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Eya3P97480 510 aa18.02■□□□□ 0.48
Ddx49-201ENSMUST00000008004 VmacQ8BP01 174 aa18.02■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Hdac9Q99N13 588 aa18.02■□□□□ 0.48
Ddx49-201ENSMUST00000008004 TicrrQ8BQ33 1889 aa18.02■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Wdr19Q3UGF1 1341 aa18.02■□□□□ 0.48
Ddx49-201ENSMUST00000008004 Ckap2Q3V1H1 664 aa18.02■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Fam196bQ6GQV1 535 aa18.02■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Tmc4Q7TQ65 694 aa18.02■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Ranbp6Q8BIV3 1105 aa18.02■□□□□ 0.47
Ddx49-201ENSMUST00000008004 DlatQ8BMF4 642 aa18.02■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Shtn1Q8K2Q9 631 aa18.02■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Lonrf3Q9D4H7 753 aa18.02■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Clstn1Q9EPL2 979 aa18.02■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Clip2Q9Z0H8 1047 aa18.02■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Col1a1P11087 1453 aa18.02■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Cep63Q3UPP8 700 aa18.01■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Ppp1r11Q8K1L5 131 aa18.01■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Ncbp1Q3UYV9 790 aaKnown RBP18.01■□□□□ 0.47
Ddx49-201ENSMUST00000008004 U2af1l4Q8BGJ9 220 aa18.01■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Lrrc2Q8VDB8 371 aa18.01■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Mrpl44Q9CY73 333 aaKnown RBP18.01■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Stx8O88983 236 aa18■□□□□ 0.47
Ddx49-201ENSMUST00000008004 GmpsQ3THK7 693 aa18■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Thrap3Q569Z6 951 aaKnown RBP18■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Tbc1d9bQ5SVR0 1263 aa18■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Mageb2A2AHM0 380 aa17.99■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Wnt10bP48614 389 aa17.99■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Ndfip2Q91ZP6 311 aa17.99■□□□□ 0.47
Ddx49-201ENSMUST00000008004 PtmsQ9D0J8 101 aaKnown RBP17.99■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Tjap1Q9DCD5 539 aa17.99■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Cap1P40124 474 aa17.99■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Leo1Q5XJE5 667 aa17.99■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Ssh1Q76I79 1042 aa17.99■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Ano1Q8BHY3 960 aa17.99■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Pik3ap1Q9EQ32 811 aa17.99■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Eif6O55135 245 aa17.98■□□□□ 0.47
Ddx49-201ENSMUST00000008004 1700013D24RikQ0P521 120 aa17.98■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Babam1Q3UI43 333 aa17.98■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Tom1l2Q5SRX1 507 aa17.98■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Ifit1Q64282 463 aa17.98■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Tacc1Q6Y685 774 aa17.98■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Terf2ipQ91VL8 393 aa17.98■□□□□ 0.47
Ddx49-201ENSMUST00000008004 NaspQ99MD9 773 aaKnown RBP17.98■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Ccdc88aQ5SNZ0 1873 aa17.98■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Pde4aO89084 844 aa17.98■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Zc3h15Q3TIV5 426 aaKnown RBP17.98■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Ccdc66Q6NS45 935 aa17.98■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Dpp8Q80YA7 892 aa17.98■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Slitrk3Q810B9 980 aa17.98■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Mad2l2Q9D752 211 aa17.98■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Rcan1Q9JHG6 198 aa17.98■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Plcb2A3KGF7 1181 aa17.97■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Foxp1P58462 705 aa17.97■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Scg2Q03517 617 aa17.97■□□□□ 0.47
Ddx49-201ENSMUST00000008004 Klrg2Q3UM83 387 aa17.97■□□□□ 0.47
Ddx49-201ENSMUST00000008004 LrmpQ60664 539 aa17.97■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 72.9 ms