RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 A0A1W2P6Q8 802 aa19.21■□□□□ 0.67
Ctcf-201ENSMUST00000005841 Gm9048A0A1W2P7H4 802 aa19.21■□□□□ 0.67
Ctcf-201ENSMUST00000005841 A0A1W2P7S8 802 aa19.21■□□□□ 0.67
Ctcf-201ENSMUST00000005841 A0A1W2P7Z8 802 aa19.21■□□□□ 0.67
Ctcf-201ENSMUST00000005841 Gm9046A0A1W2P855 802 aa19.21■□□□□ 0.67
Ctcf-201ENSMUST00000005841 Eya2O08575 532 aa19.21■□□□□ 0.67
Ctcf-201ENSMUST00000005841 Akap2O54931 893 aa19.21■□□□□ 0.67
Ctcf-201ENSMUST00000005841 Sema4bQ62179 823 aa19.21■□□□□ 0.67
Ctcf-201ENSMUST00000005841 Cdc5lQ6A068 802 aaKnown RBP19.21■□□□□ 0.67
Ctcf-201ENSMUST00000005841 Tcp11l2Q8K1H7 517 aa19.21■□□□□ 0.67
Ctcf-201ENSMUST00000005841 Gimap6Q8K349 305 aa19.21■□□□□ 0.67
Ctcf-201ENSMUST00000005841 Lipo1J3QME6 396 aa19.21■□□□□ 0.67
Ctcf-201ENSMUST00000005841 Psmd14O35593 310 aa19.21■□□□□ 0.67
Ctcf-201ENSMUST00000005841 NefhP19246 1090 aa19.21■□□□□ 0.67
Ctcf-201ENSMUST00000005841 SsbP32067 415 aaKnown RBP19.21■□□□□ 0.67
Ctcf-201ENSMUST00000005841 Usp49Q6P9L4 685 aa19.21■□□□□ 0.67
Ctcf-201ENSMUST00000005841 Dnajc5gQ8C632 165 aa19.21■□□□□ 0.67
Ctcf-201ENSMUST00000005841 Ltb4r2Q9JJL9 360 aa19.21■□□□□ 0.67
Ctcf-201ENSMUST00000005841 Syde2E9PUP1 1314 aa19.21■□□□□ 0.67
Ctcf-201ENSMUST00000005841 Snapc4Q8BP86 1333 aa19.2■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Wee1P47810 646 aa19.2■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Slc39a6Q8C145 765 aa19.2■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Txndc5Q91W90 417 aa19.2■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Sval3Q76I99 144 aa19.2■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Ssfa2Q922B9 1252 aa19.2■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Ribc1Q9D0B8 379 aa19.2■□□□□ 0.66
Ctcf-201ENSMUST00000005841 AvenQ9D9K3 342 aa19.2■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Hip1rQ9JKY5 1068 aa19.2■□□□□ 0.66
Ctcf-201ENSMUST00000005841 TnksQ6PFX9 1320 aa19.2■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Foxp1P58462 705 aa19.2■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Hand2Q61039 217 aa19.2■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Soga3Q6NZL0 945 aa19.2■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Papd7Q6PB75 542 aa19.2■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Rec8Q8C5S7 591 aa19.2■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Msantd4Q91YU3 345 aa19.2■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Vmn2r78K7N6U5 853 aa19.19■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Tubb5P99024 444 aaKnown RBP19.19■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Gucy2cQ3UWA6 1072 aa19.19■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Snd1Q78PY7 910 aaKnown RBP19.19■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Q8C5K5 320 aa19.19■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Appbp2Q9DAX9 585 aa19.19■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Il7P10168 154 aa19.19■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Sh3gl2Q62420 352 aa19.19■□□□□ 0.66
Ctcf-201ENSMUST00000005841 3830417A13RikQ8BQJ2 303 aa19.19■□□□□ 0.66
Ctcf-201ENSMUST00000005841 OptnQ8K3K8 584 aa19.19■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Xrcc4Q924T3 326 aa19.19■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Scn11aQ9R053 1765 aa19.19■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Zbtb38Q3LR78 1197 aa19.19■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Glis3Q6XP49 780 aa19.19■□□□□ 0.66
Ctcf-201ENSMUST00000005841 ThemisQ8BGW0 636 aa19.19■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Rc3h1Q4VGL6 1130 aaKnown RBP19.18■□□□□ 0.66
Ctcf-201ENSMUST00000005841 VmacQ8BP01 174 aa19.18■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Zc3h6Q8BYK8 1177 aa19.18■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Nxnl2Q9D531 156 aa19.18■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Ccdc39Q9D5Y1 937 aa19.18■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Sh3bp5Q9Z131 463 aa19.18■□□□□ 0.66
Ctcf-201ENSMUST00000005841 C2cd2E9Q3C1 696 aa19.18■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Smarca1Q6PGB8 1046 aa19.18■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Necab1Q8BG18 352 aa19.18■□□□□ 0.66
Ctcf-201ENSMUST00000005841 AbraQ8BUZ1 375 aa19.18■□□□□ 0.66
Ctcf-201ENSMUST00000005841 AdarQ99MU3 1178 aaKnown RBP19.18■□□□□ 0.66
Ctcf-201ENSMUST00000005841 MetP16056 1379 aa19.18■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Med23Q80YQ2 1367 aa19.18■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Ankle2Q6P1H6 964 aa19.18■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Rassf8Q8CJ96 419 aa19.18■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Etnk1Q9D4V0 363 aa19.18■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Hic2Q9JLZ6 619 aaKnown RBP19.18■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Abhd2Q9QXM0 425 aa19.18■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Exoc5Q3TPX4 708 aa19.17■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Rnf40Q3U319 1001 aa19.17■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Thap2Q9D305 217 aa19.17■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Col20a1Q923P0 1320 aa19.17■□□□□ 0.66
Ctcf-201ENSMUST00000005841 E9QMW4 1145 aa19.17■□□□□ 0.66
Ctcf-201ENSMUST00000005841 LtbrP50284 415 aa19.17■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Jakmip3Q5DTN8 844 aa19.17■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Ppp1r1bQ60829 194 aa19.17■□□□□ 0.66
Ctcf-201ENSMUST00000005841 MtrrQ8C1A3 696 aa19.17■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Tldc1Q8K0P3 455 aa19.17■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Slc5a4aQ9ET37 656 aa19.17■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Ccdc150Q8CDI7 1110 aa19.17■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Polr2dQ9D7M8 142 aaKnown RBP19.17■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Myh4Q5SX39 1939 aa19.16■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Scgb2b11A0A087WR49 112 aa19.16■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Sec14l1A8Y5H7 715 aa19.16■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Dnm1P39053 867 aa19.16■□□□□ 0.66
Ctcf-201ENSMUST00000005841 ImmtQ8CAQ8 757 aaKnown RBP19.16■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Pcdha7Q91Y13 937 aa19.16■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Ccdc83Q9D4V3 305 aa19.16■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Ccne2Q9Z238 404 aa19.16■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Arhgap6O54834 987 aa19.16■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Pde5aQ8CG03 865 aa19.16■□□□□ 0.66
Ctcf-201ENSMUST00000005841 E2f4Q8R0K9 410 aa19.16■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Stap2Q8R0L1 411 aa19.16■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Plekha7Q3UIL6 1118 aaKnown RBP19.16■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Kdm7aQ3UWM4 940 aa19.16■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Lrrc2Q8VDB8 371 aa19.16■□□□□ 0.66
Ctcf-201ENSMUST00000005841 NapgQ9CWZ7 312 aa19.16■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Sept12Q9D451 317 aa19.16■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Kcnq5Q9JK45 933 aa19.16■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Lamb1P02469 1786 aa19.15■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms