RNA–Protein interactions for RNA: ENST00000640141.1

KCNMA1-278, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-278ENST00000640141 FLGP20930 4061 aaPredicted RBP5.67□□□□□ -1.5
KCNMA1-278ENST00000640141 MT4P47944 62 aa5.61□□□□□ -1.51
KCNMA1-278ENST00000640141 UBR4Q5T4S7 5183 aa5.58□□□□□ -1.52
KCNMA1-278ENST00000640141 LCE2AQ5TA79 106 aaPredicted RBP5.56□□□□□ -1.52
KCNMA1-278ENST00000640141 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
KCNMA1-278ENST00000640141 TNXBP22105 4242 aa5.51□□□□□ -1.53
KCNMA1-278ENST00000640141 RNF213Q63HN8 5207 aa5.51□□□□□ -1.53
KCNMA1-278ENST00000640141 KRTAP4-3Q9BYR4 195 aa5.51□□□□□ -1.53
KCNMA1-278ENST00000640141 PRM1P04553 51 aa5.47□□□□□ -1.53
KCNMA1-278ENST00000640141 FAT4Q6V0I7 4981 aa5.47□□□□□ -1.53
KCNMA1-278ENST00000640141 KRTAP19-7Q3SYF9 63 aa5.43□□□□□ -1.54
KCNMA1-278ENST00000640141 LCE1BQ5T7P3 118 aa5.42□□□□□ -1.54
KCNMA1-278ENST00000640141 FSIP2Q5CZC0 6907 aa5.41□□□□□ -1.54
KCNMA1-278ENST00000640141 LCE1DQ5T752 114 aa5.4□□□□□ -1.54
KCNMA1-278ENST00000640141 MT1AP04731 61 aa5.4□□□□□ -1.55
KCNMA1-278ENST00000640141 KRTAP9-6A0A140TA67 174 aa5.38□□□□□ -1.55
KCNMA1-278ENST00000640141 HMCN2Q8NDA2 5059 aa5.28□□□□□ -1.56
KCNMA1-278ENST00000640141 MUC2Q02817 5179 aa5.26□□□□□ -1.57
KCNMA1-278ENST00000640141 KRTAP2-3P0C7H8 128 aa5.24□□□□□ -1.57
KCNMA1-278ENST00000640141 KRTAP2-4Q9BYR9 128 aa5.24□□□□□ -1.57
KCNMA1-278ENST00000640141 KRTAP2-1Q9BYU5 128 aa5.24□□□□□ -1.57
KCNMA1-278ENST00000640141 LCE1AQ5T7P2 110 aa5.18□□□□□ -1.58
KCNMA1-278ENST00000640141 KRTAP4-9Q9BYQ8 210 aa5.14□□□□□ -1.59
KCNMA1-278ENST00000640141 KRTAP20-1Q3LI63 56 aa5.13□□□□□ -1.59
KCNMA1-278ENST00000640141 KRTAP6-3Q3LI67 103 aa5.11□□□□□ -1.59
KCNMA1-278ENST00000640141 KRTAP9-7A8MTY7 169 aa5.1□□□□□ -1.59
KCNMA1-278ENST00000640141 LCE5AQ5TCM9 118 aa5.08□□□□□ -1.6
KCNMA1-278ENST00000640141 SYNE2Q8WXH0 6885 aaKnown RBP5.07□□□□□ -1.6
KCNMA1-278ENST00000640141 OBSCNQ5VST9 7968 aa5.07□□□□□ -1.6
KCNMA1-278ENST00000640141 KRTAP6-1Q3LI64 71 aa4.98□□□□□ -1.61
KCNMA1-278ENST00000640141 KRTAP6-2Q3LI66 62 aa4.95□□□□□ -1.62
KCNMA1-278ENST00000640141 KRTAP9-4Q9BYQ2 154 aa4.95□□□□□ -1.62
KCNMA1-278ENST00000640141 LCE4AQ5TA78 99 aa4.93□□□□□ -1.62
KCNMA1-278ENST00000640141 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.92□□□□□ -1.62
KCNMA1-278ENST00000640141 KRTAP9-6A8MVA2 160 aa4.9□□□□□ -1.62
KCNMA1-278ENST00000640141 KRTAP2-2Q9BYT5 123 aa4.83□□□□□ -1.64
KCNMA1-278ENST00000640141 USH2AO75445 5202 aa4.68□□□□□ -1.66
KCNMA1-278ENST00000640141 LCE1CQ5T751 118 aa4.62□□□□□ -1.67
KCNMA1-278ENST00000640141 LCE1EQ5T753 118 aa4.62□□□□□ -1.67
KCNMA1-278ENST00000640141 LCE1FQ5T754 118 aa4.62□□□□□ -1.67
KCNMA1-278ENST00000640141 FCGBPQ9Y6R7 5405 aaPredicted RBP4.61□□□□□ -1.67
KCNMA1-278ENST00000640141 DSTQ03001 7570 aaKnown RBP4.56□□□□□ -1.68
KCNMA1-278ENST00000640141 MACF1Q9UPN3 7388 aaKnown RBP4.47□□□□□ -1.69
KCNMA1-278ENST00000640141 KMT2DO14686 5537 aa4.38□□□□□ -1.71
KCNMA1-278ENST00000640141 KRTAP5-9P26371 169 aa4.36□□□□□ -1.71
KCNMA1-278ENST00000640141 NEBP20929 6669 aa4.31□□□□□ -1.72
KCNMA1-278ENST00000640141 KRTAP9-9Q9BYP9 154 aa4.3□□□□□ -1.72
KCNMA1-278ENST00000640141 MDN1Q9NU22 5596 aa4.2□□□□□ -1.74
KCNMA1-278ENST00000640141 SSPOA2VEC9 5147 aa4.18□□□□□ -1.74
KCNMA1-278ENST00000640141 MUC19Q7Z5P9 8384 aa4.1□□□□□ -1.75
KCNMA1-278ENST00000640141 KRTAP4-6Q9BYQ5 205 aa4.1□□□□□ -1.75
KCNMA1-278ENST00000640141 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
KCNMA1-278ENST00000640141 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
KCNMA1-278ENST00000640141 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
KCNMA1-278ENST00000640141 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
KCNMA1-278ENST00000640141 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
KCNMA1-278ENST00000640141 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.81
KCNMA1-278ENST00000640141 KRTAP4-12Q9BQ66 201 aa3.68□□□□□ -1.82
KCNMA1-278ENST00000640141 KRTAP4-2Q9BYR5 136 aa3.68□□□□□ -1.82
KCNMA1-278ENST00000640141 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
KCNMA1-278ENST00000640141 MUC5ACP98088 5654 aa3.43□□□□□ -1.86
KCNMA1-278ENST00000640141 KRTAP5-3Q6L8H2 238 aa3.36□□□□□ -1.87
KCNMA1-278ENST00000640141 AHNAK2Q8IVF2 5795 aa3.34□□□□□ -1.87
KCNMA1-278ENST00000640141 HMCN1Q96RW7 5635 aa3.34□□□□□ -1.87
KCNMA1-278ENST00000640141 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
KCNMA1-278ENST00000640141 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
KCNMA1-278ENST00000640141 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
KCNMA1-278ENST00000640141 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
KCNMA1-278ENST00000640141 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.97
KCNMA1-278ENST00000640141 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
KCNMA1-278ENST00000640141 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.97
KCNMA1-278ENST00000640141 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
KCNMA1-278ENST00000640141 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
KCNMA1-278ENST00000640141 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
KCNMA1-278ENST00000640141 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
KCNMA1-278ENST00000640141 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
KCNMA1-278ENST00000640141 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms