RNA–Protein interactions for RNA: ENST00000640027.1

MED17-222, Transcript of mediator complex subunit 17, human

TSL 5

Gene MED17, Length 4,569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-222	ENST00000640027	LCE2A	Q5TA79	106 aa	Predicted RBP	4.6	□□□□□ -1.67
MED17-222	ENST00000640027	KRTAP19-3	Q7Z4W3	81 aa		4.6	□□□□□ -1.67
MED17-222	ENST00000640027	LCE2D	Q5TA82	110 aa	Predicted RBP	4.58	□□□□□ -1.68
MED17-222	ENST00000640027	OBSCN	Q5VST9	7968 aa		4.57	□□□□□ -1.68
MED17-222	ENST00000640027	KRTAP4-7	Q9BYR0	210 aa		4.5	□□□□□ -1.69
MED17-222	ENST00000640027	MT1L	Q93083	61 aa		4.48	□□□□□ -1.69
MED17-222	ENST00000640027	MT1E	P04732	61 aa		4.44	□□□□□ -1.7
MED17-222	ENST00000640027	MT4	P47944	62 aa		4.41	□□□□□ -1.7
MED17-222	ENST00000640027	MT3	P25713	68 aa		4.4	□□□□□ -1.71
MED17-222	ENST00000640027	KRTAP9-2	Q9BYQ4	174 aa		4.37	□□□□□ -1.71
MED17-222	ENST00000640027	MT1M	Q8N339	61 aa		4.33	□□□□□ -1.72
MED17-222	ENST00000640027	USH2A	O75445	5202 aa		4.32	□□□□□ -1.72
MED17-222	ENST00000640027	LCE1B	Q5T7P3	118 aa		4.31	□□□□□ -1.72
MED17-222	ENST00000640027	MACF1	Q9UPN3	7388 aa	Known RBP	4.3	□□□□□ -1.72
MED17-222	ENST00000640027	KRTAP19-6	Q3LI70	58 aa		4.29	□□□□□ -1.72
MED17-222	ENST00000640027	LCE1D	Q5T752	114 aa		4.28	□□□□□ -1.73
MED17-222	ENST00000640027	SYNE2	Q8WXH0	6885 aa	Known RBP	4.24	□□□□□ -1.73
MED17-222	ENST00000640027	DST	Q03001	7570 aa	Known RBP	4.23	□□□□□ -1.73
MED17-222	ENST00000640027	KRTAP4-3	Q9BYR4	195 aa		4.2	□□□□□ -1.74
MED17-222	ENST00000640027	LOC100996750	A0A140TA64	210 aa		4.19	□□□□□ -1.74
MED17-222	ENST00000640027	KMT2D	O14686	5537 aa		4.16	□□□□□ -1.74
MED17-222	ENST00000640027	PRM1	P04553	51 aa		4.16	□□□□□ -1.74
MED17-222	ENST00000640027	KRTAP9-6	A0A140TA67	174 aa		4.15	□□□□□ -1.74
MED17-222	ENST00000640027	KRTAP2-3	P0C7H8	128 aa		4.13	□□□□□ -1.75
MED17-222	ENST00000640027	KRTAP2-4	Q9BYR9	128 aa		4.13	□□□□□ -1.75
MED17-222	ENST00000640027	KRTAP2-1	Q9BYU5	128 aa		4.13	□□□□□ -1.75
MED17-222	ENST00000640027	KRTAP19-7	Q3SYF9	63 aa		4.12	□□□□□ -1.75
MED17-222	ENST00000640027	SSPO	A2VEC9	5147 aa		4.11	□□□□□ -1.75
MED17-222	ENST00000640027	KRTAP9-6	A8MVA2	160 aa		4.07	□□□□□ -1.76
MED17-222	ENST00000640027	MT1A	P04731	61 aa		4.05	□□□□□ -1.76
MED17-222	ENST00000640027	LCE5A	Q5TCM9	118 aa		4.03	□□□□□ -1.76
MED17-222	ENST00000640027	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.01	□□□□□ -1.77
MED17-222	ENST00000640027	MUC19	Q7Z5P9	8384 aa		4	□□□□□ -1.77
MED17-222	ENST00000640027	KRTAP9-7	A8MTY7	169 aa		3.99	□□□□□ -1.77
MED17-222	ENST00000640027	KRTAP20-1	Q3LI63	56 aa		3.99	□□□□□ -1.77
MED17-222	ENST00000640027	KRTAP4-9	Q9BYQ8	210 aa		3.95	□□□□□ -1.78
MED17-222	ENST00000640027	LCE1A	Q5T7P2	110 aa		3.91	□□□□□ -1.78
MED17-222	ENST00000640027	GPR98	Q8WXG9	6306 aa		3.9	□□□□□ -1.79
MED17-222	ENST00000640027	KRTAP6-3	Q3LI67	103 aa		3.84	□□□□□ -1.8
MED17-222	ENST00000640027	KRTAP6-2	Q3LI66	62 aa		3.78	□□□□□ -1.8
MED17-222	ENST00000640027	MUC12	Q9UKN1	5478 aa		3.76	□□□□□ -1.81
MED17-222	ENST00000640027	KRTAP6-1	Q3LI64	71 aa		3.75	□□□□□ -1.81
MED17-222	ENST00000640027	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	3.75	□□□□□ -1.81
MED17-222	ENST00000640027	KRTAP2-2	Q9BYT5	123 aa		3.74	□□□□□ -1.81
MED17-222	ENST00000640027	LCE1C	Q5T751	118 aa		3.71	□□□□□ -1.82
MED17-222	ENST00000640027	LCE1E	Q5T753	118 aa		3.71	□□□□□ -1.82
MED17-222	ENST00000640027	LCE1F	Q5T754	118 aa		3.71	□□□□□ -1.82
MED17-222	ENST00000640027	LCE4A	Q5TA78	99 aa		3.71	□□□□□ -1.82
MED17-222	ENST00000640027	MDN1	Q9NU22	5596 aa		3.71	□□□□□ -1.82
MED17-222	ENST00000640027	KRTAP9-4	Q9BYQ2	154 aa		3.66	□□□□□ -1.82
MED17-222	ENST00000640027	KRTAP5-9	P26371	169 aa		3.56	□□□□□ -1.84
MED17-222	ENST00000640027	NEB	P20929	6669 aa		3.41	□□□□□ -1.86
MED17-222	ENST00000640027	KRTAP9-9	Q9BYP9	154 aa		3.38	□□□□□ -1.87
MED17-222	ENST00000640027	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.32	□□□□□ -1.88
MED17-222	ENST00000640027	KRTAP4-6	Q9BYQ5	205 aa		3.15	□□□□□ -1.9
MED17-222	ENST00000640027	KRTAP4-11	Q9BYQ6	195 aa		3.09	□□□□□ -1.92
MED17-222	ENST00000640027	KRTAP20-2	Q3LI61	65 aa		3.08	□□□□□ -1.92
MED17-222	ENST00000640027	KRTAP5-4	Q6L8H1	288 aa		3.02	□□□□□ -1.93
MED17-222	ENST00000640027	HMCN1	Q96RW7	5635 aa		2.95	□□□□□ -1.94
MED17-222	ENST00000640027	KRTAP4-12	Q9BQ66	201 aa		2.94	□□□□□ -1.94
MED17-222	ENST00000640027	KRTAP4-4	Q9BYR3	166 aa		2.94	□□□□□ -1.94
MED17-222	ENST00000640027	KRTAP4-2	Q9BYR5	136 aa		2.94	□□□□□ -1.94
MED17-222	ENST00000640027	MUC5AC	P98088	5654 aa		2.94	□□□□□ -1.94
MED17-222	ENST00000640027	AHNAK2	Q8IVF2	5795 aa		2.84	□□□□□ -1.96
MED17-222	ENST00000640027	KRTAP5-2	Q701N4	177 aa		2.78	□□□□□ -1.97
MED17-222	ENST00000640027	KRTAP5-3	Q6L8H2	238 aa		2.71	□□□□□ -1.98
MED17-222	ENST00000640027	KRTAP5-1	Q6L8H4	278 aa		2.39	□□□□□ -2.03
MED17-222	ENST00000640027	KRTAP5-10	Q6L8G5	202 aa		2.36	□□□□□ -2.03
MED17-222	ENST00000640027	AHNAK	Q09666	5890 aa	Known RBP	2.36	□□□□□ -2.03
MED17-222	ENST00000640027	KRTAP5-8	O75690	187 aa		2.34	□□□□□ -2.03
MED17-222	ENST00000640027	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.28	□□□□□ -2.04
MED17-222	ENST00000640027	PHGR1	C9JFL3	82 aa		2.23	□□□□□ -2.05
MED17-222	ENST00000640027	KRTAP5-7	Q6L8G8	165 aa		2.21	□□□□□ -2.06
MED17-222	ENST00000640027	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.2	□□□□□ -2.06
MED17-222	ENST00000640027	KRTAP21-1	Q3LI58	79 aa		2.18	□□□□□ -2.06
MED17-222	ENST00000640027	KRTAP21-2	Q3LI59	83 aa		2.17	□□□□□ -2.06
MED17-222	ENST00000640027	KRTAP5-11	Q6L8G4	156 aa		2.07	□□□□□ -2.08
MED17-222	ENST00000640027	MUC16	Q8WXI7	14507 aa		1.32	□□□□□ -2.2

Retrieved 78 of 20,778 RNA–protein pairs in 225.3 ms