RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 MT1EP04732 61 aa4.78□□□□□ -1.64
SCARB2-216ENST00000639300 KRTAP19-3Q7Z4W3 81 aa4.73□□□□□ -1.65
SCARB2-216ENST00000639300 LCE2AQ5TA79 106 aaPredicted RBP4.68□□□□□ -1.66
SCARB2-216ENST00000639300 USH2AO75445 5202 aa4.65□□□□□ -1.67
SCARB2-216ENST00000639300 KRTAP4-3Q9BYR4 195 aa4.64□□□□□ -1.67
SCARB2-216ENST00000639300 KRTAP19-7Q3SYF9 63 aa4.63□□□□□ -1.67
SCARB2-216ENST00000639300 SPRR2DP22532 72 aa4.62□□□□□ -1.67
SCARB2-216ENST00000639300 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
SCARB2-216ENST00000639300 LOC100996750A0A140TA64 210 aa4.62□□□□□ -1.67
SCARB2-216ENST00000639300 KRTAP19-6Q3LI70 58 aa4.6□□□□□ -1.67
SCARB2-216ENST00000639300 MT1MQ8N339 61 aa4.58□□□□□ -1.68
SCARB2-216ENST00000639300 LCE3DQ9BYE3 92 aa4.57□□□□□ -1.68
SCARB2-216ENST00000639300 FCGBPQ9Y6R7 5405 aaPredicted RBP4.57□□□□□ -1.68
SCARB2-216ENST00000639300 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
SCARB2-216ENST00000639300 KMT2DO14686 5537 aa4.47□□□□□ -1.69
SCARB2-216ENST00000639300 KRTAP9-2Q9BYQ4 174 aa4.42□□□□□ -1.7
SCARB2-216ENST00000639300 SYNE2Q8WXH0 6885 aaKnown RBP4.41□□□□□ -1.7
SCARB2-216ENST00000639300 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
SCARB2-216ENST00000639300 KRTAP2-3P0C7H8 128 aa4.3□□□□□ -1.72
SCARB2-216ENST00000639300 KRTAP2-4Q9BYR9 128 aa4.3□□□□□ -1.72
SCARB2-216ENST00000639300 KRTAP2-1Q9BYU5 128 aa4.3□□□□□ -1.72
SCARB2-216ENST00000639300 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
SCARB2-216ENST00000639300 LCE2DQ5TA82 110 aaPredicted RBP4.27□□□□□ -1.73
SCARB2-216ENST00000639300 MT3P25713 68 aa4.23□□□□□ -1.73
SCARB2-216ENST00000639300 MUC12Q9UKN1 5478 aa4.22□□□□□ -1.73
SCARB2-216ENST00000639300 MT4P47944 62 aa4.2□□□□□ -1.74
SCARB2-216ENST00000639300 PRM1P04553 51 aa4.18□□□□□ -1.74
SCARB2-216ENST00000639300 MT1AP04731 61 aa4.18□□□□□ -1.74
SCARB2-216ENST00000639300 SSPOA2VEC9 5147 aa4.11□□□□□ -1.75
SCARB2-216ENST00000639300 LCE5AQ5TCM9 118 aa4.1□□□□□ -1.75
SCARB2-216ENST00000639300 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.76
SCARB2-216ENST00000639300 MACF1Q9UPN3 7388 aaKnown RBP4.07□□□□□ -1.76
SCARB2-216ENST00000639300 KRTAP9-6A0A140TA67 174 aa4.01□□□□□ -1.77
SCARB2-216ENST00000639300 LCE1AQ5T7P2 110 aa4.01□□□□□ -1.77
SCARB2-216ENST00000639300 LCE1DQ5T752 114 aa3.99□□□□□ -1.77
SCARB2-216ENST00000639300 LCE1BQ5T7P3 118 aa3.98□□□□□ -1.77
SCARB2-216ENST00000639300 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
SCARB2-216ENST00000639300 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.85□□□□□ -1.79
SCARB2-216ENST00000639300 KRTAP6-3Q3LI67 103 aa3.85□□□□□ -1.79
SCARB2-216ENST00000639300 KRTAP9-4Q9BYQ2 154 aa3.85□□□□□ -1.79
SCARB2-216ENST00000639300 KRTAP9-7A8MTY7 169 aa3.84□□□□□ -1.79
SCARB2-216ENST00000639300 MDN1Q9NU22 5596 aa3.81□□□□□ -1.8
SCARB2-216ENST00000639300 MUC19Q7Z5P9 8384 aa3.72□□□□□ -1.81
SCARB2-216ENST00000639300 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
SCARB2-216ENST00000639300 LCE4AQ5TA78 99 aa3.58□□□□□ -1.84
SCARB2-216ENST00000639300 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
SCARB2-216ENST00000639300 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
SCARB2-216ENST00000639300 NEBP20929 6669 aa3.48□□□□□ -1.85
SCARB2-216ENST00000639300 KRTAP4-6Q9BYQ5 205 aa3.44□□□□□ -1.86
SCARB2-216ENST00000639300 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
SCARB2-216ENST00000639300 KRTAP5-5Q701N2 237 aaPredicted RBP3.22□□□□□ -1.89
SCARB2-216ENST00000639300 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
SCARB2-216ENST00000639300 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
SCARB2-216ENST00000639300 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
SCARB2-216ENST00000639300 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
SCARB2-216ENST00000639300 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
SCARB2-216ENST00000639300 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
SCARB2-216ENST00000639300 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
SCARB2-216ENST00000639300 KRTAP9-9Q9BYP9 154 aa2.97□□□□□ -1.93
SCARB2-216ENST00000639300 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
SCARB2-216ENST00000639300 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
SCARB2-216ENST00000639300 KRTAP4-12Q9BQ66 201 aa2.88□□□□□ -1.95
SCARB2-216ENST00000639300 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
SCARB2-216ENST00000639300 AHNAK2Q8IVF2 5795 aa2.73□□□□□ -1.97
SCARB2-216ENST00000639300 KRTAP5-3Q6L8H2 238 aa2.66□□□□□ -1.98
SCARB2-216ENST00000639300 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
SCARB2-216ENST00000639300 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
SCARB2-216ENST00000639300 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
SCARB2-216ENST00000639300 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
SCARB2-216ENST00000639300 KRTAP5-1Q6L8H4 278 aa2.3□□□□□ -2.04
SCARB2-216ENST00000639300 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
SCARB2-216ENST00000639300 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
SCARB2-216ENST00000639300 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
SCARB2-216ENST00000639300 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
SCARB2-216ENST00000639300 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
SCARB2-216ENST00000639300 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
SCARB2-216ENST00000639300 KRTAP5-7Q6L8G8 165 aa1.82□□□□□ -2.12
SCARB2-216ENST00000639300 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 159.6 ms