RNA–Protein interactions for RNA: ENST00000639128.1

RTTN-214, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 4,547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-214ENST00000639128 FAT4Q6V0I7 4981 aa1.8□□□□□ -2.12
RTTN-214ENST00000639128 PRM1P04553 51 aa1.79□□□□□ -2.12
RTTN-214ENST00000639128 LCE5AQ5TCM9 118 aa1.78□□□□□ -2.12
RTTN-214ENST00000639128 KRTAP19-1Q8IUB9 90 aa1.78□□□□□ -2.13
RTTN-214ENST00000639128 KRTAP19-2Q3LHN2 52 aa1.77□□□□□ -2.13
RTTN-214ENST00000639128 MT1GP13640 62 aa1.75□□□□□ -2.13
RTTN-214ENST00000639128 SPRR2FQ96RM1 72 aa1.75□□□□□ -2.13
RTTN-214ENST00000639128 KRTAP4-2Q9BYR5 136 aa1.75□□□□□ -2.13
RTTN-214ENST00000639128 KRTAP19-8Q3LI54 63 aa1.73□□□□□ -2.13
RTTN-214ENST00000639128 MT2AP02795 61 aa1.72□□□□□ -2.13
RTTN-214ENST00000639128 SPRR2AP35326 72 aa1.72□□□□□ -2.13
RTTN-214ENST00000639128 MT1LQ93083 61 aa1.71□□□□□ -2.14
RTTN-214ENST00000639128 KRTAP4-11Q9BYQ6 195 aa1.7□□□□□ -2.14
RTTN-214ENST00000639128 SPRR2BP35325 72 aa1.7□□□□□ -2.14
RTTN-214ENST00000639128 KMT2DO14686 5537 aa1.68□□□□□ -2.14
RTTN-214ENST00000639128 MT1FP04733 61 aa1.68□□□□□ -2.14
RTTN-214ENST00000639128 KRTAP2-3P0C7H8 128 aa1.68□□□□□ -2.14
RTTN-214ENST00000639128 KRTAP2-4Q9BYR9 128 aa1.68□□□□□ -2.14
RTTN-214ENST00000639128 KRTAP2-1Q9BYU5 128 aa1.68□□□□□ -2.14
RTTN-214ENST00000639128 KRTAP9-3Q9BYQ3 159 aa1.68□□□□□ -2.14
RTTN-214ENST00000639128 LCE1FQ5T754 118 aa1.66□□□□□ -2.14
RTTN-214ENST00000639128 MT1XP80297 61 aa1.66□□□□□ -2.14
RTTN-214ENST00000639128 SYNE1Q8NF91 8797 aaKnown RBP1.65□□□□□ -2.14
RTTN-214ENST00000639128 MT1HP80294 61 aa1.63□□□□□ -2.15
RTTN-214ENST00000639128 MT1BP07438 61 aa1.62□□□□□ -2.15
RTTN-214ENST00000639128 SPRR2DP22532 72 aa1.62□□□□□ -2.15
RTTN-214ENST00000639128 USH2AO75445 5202 aa1.62□□□□□ -2.15
RTTN-214ENST00000639128 MT1EP04732 61 aa1.61□□□□□ -2.15
RTTN-214ENST00000639128 KRTAP9-6A8MVA2 160 aa1.6□□□□□ -2.15
RTTN-214ENST00000639128 KRTAP2-2Q9BYT5 123 aa1.59□□□□□ -2.15
RTTN-214ENST00000639128 SPRR2EP22531 72 aa1.59□□□□□ -2.16
RTTN-214ENST00000639128 MT1AP04731 61 aa1.57□□□□□ -2.16
RTTN-214ENST00000639128 KRTAP19-3Q7Z4W3 81 aa1.57□□□□□ -2.16
RTTN-214ENST00000639128 SSPOA2VEC9 5147 aa1.56□□□□□ -2.16
RTTN-214ENST00000639128 LCE1AQ5T7P2 110 aa1.54□□□□□ -2.16
RTTN-214ENST00000639128 DSTQ03001 7570 aaKnown RBP1.52□□□□□ -2.17
RTTN-214ENST00000639128 FCGBPQ9Y6R7 5405 aaPredicted RBP1.51□□□□□ -2.17
RTTN-214ENST00000639128 FSIP2Q5CZC0 6907 aa1.51□□□□□ -2.17
RTTN-214ENST00000639128 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
RTTN-214ENST00000639128 HMCN1Q96RW7 5635 aa1.5□□□□□ -2.17
RTTN-214ENST00000639128 LCE1BQ5T7P3 118 aa1.5□□□□□ -2.17
RTTN-214ENST00000639128 MT1MQ8N339 61 aa1.48□□□□□ -2.17
RTTN-214ENST00000639128 GPR98Q8WXG9 6306 aa1.48□□□□□ -2.17
RTTN-214ENST00000639128 LCE1EQ5T753 118 aa1.47□□□□□ -2.17
RTTN-214ENST00000639128 KRTAP6-2Q3LI66 62 aa1.47□□□□□ -2.17
RTTN-214ENST00000639128 KRTAP4-3Q9BYR4 195 aa1.47□□□□□ -2.17
RTTN-214ENST00000639128 KRTAP19-7Q3SYF9 63 aa1.46□□□□□ -2.18
RTTN-214ENST00000639128 KRTAP20-1Q3LI63 56 aa1.45□□□□□ -2.18
RTTN-214ENST00000639128 MACF1Q9UPN3 7388 aaKnown RBP1.44□□□□□ -2.18
RTTN-214ENST00000639128 MUC12Q9UKN1 5478 aa1.42□□□□□ -2.18
RTTN-214ENST00000639128 KRTAP6-3Q3LI67 103 aa1.41□□□□□ -2.18
RTTN-214ENST00000639128 SYNE2Q8WXH0 6885 aaKnown RBP1.37□□□□□ -2.19
RTTN-214ENST00000639128 KRTAP19-6Q3LI70 58 aa1.37□□□□□ -2.19
RTTN-214ENST00000639128 MT4P47944 62 aa1.32□□□□□ -2.2
RTTN-214ENST00000639128 KRTAP5-5Q701N2 237 aaPredicted RBP1.32□□□□□ -2.2
RTTN-214ENST00000639128 LCE1CQ5T751 118 aa1.31□□□□□ -2.2
RTTN-214ENST00000639128 MDN1Q9NU22 5596 aa1.29□□□□□ -2.2
RTTN-214ENST00000639128 KRTAP6-1Q3LI64 71 aa1.27□□□□□ -2.21
RTTN-214ENST00000639128 MUC5BQ9HC84 5762 aaPredicted RBP1.26□□□□□ -2.21
RTTN-214ENST00000639128 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.22□□□□□ -2.21
RTTN-214ENST00000639128 NEBP20929 6669 aa1.22□□□□□ -2.21
RTTN-214ENST00000639128 KRTAP5-9P26371 169 aa1.16□□□□□ -2.22
RTTN-214ENST00000639128 KRTAP5-11Q6L8G4 156 aa1.08□□□□□ -2.24
RTTN-214ENST00000639128 KRTAP5-4Q6L8H1 288 aa1.08□□□□□ -2.24
RTTN-214ENST00000639128 KRTAP5-1Q6L8H4 278 aa1.08□□□□□ -2.24
RTTN-214ENST00000639128 KRTAP5-7Q6L8G8 165 aa1.05□□□□□ -2.24
RTTN-214ENST00000639128 AHNAKQ09666 5890 aaKnown RBP1.05□□□□□ -2.24
RTTN-214ENST00000639128 KRTAP4-4Q9BYR3 166 aa1.04□□□□□ -2.24
RTTN-214ENST00000639128 KRTAP20-2Q3LI61 65 aa1.03□□□□□ -2.24
RTTN-214ENST00000639128 AHNAK2Q8IVF2 5795 aa1.01□□□□□ -2.25
RTTN-214ENST00000639128 MUC5ACP98088 5654 aa0.97□□□□□ -2.25
RTTN-214ENST00000639128 KRTAP5-10Q6L8G5 202 aa0.95□□□□□ -2.26
RTTN-214ENST00000639128 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
RTTN-214ENST00000639128 KRTAP5-8O75690 187 aa0.89□□□□□ -2.27
RTTN-214ENST00000639128 KRTAP5-2Q701N4 177 aa0.89□□□□□ -2.27
RTTN-214ENST00000639128 PHGR1C9JFL3 82 aa0.79□□□□□ -2.28
RTTN-214ENST00000639128 KRTAP21-2Q3LI59 83 aa0.77□□□□□ -2.29
RTTN-214ENST00000639128 MUC16Q8WXI7 14507 aa0.49□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 146.6 ms