RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 KRTAP6-3Q3LI67 103 aa3.22□□□□□ -1.89
CDKL5-211ENST00000637881 MT2AP02795 61 aa3.2□□□□□ -1.9
CDKL5-211ENST00000637881 MT1FP04733 61 aa3.17□□□□□ -1.9
CDKL5-211ENST00000637881 KRTAP8-1Q8IUC2 63 aa3.17□□□□□ -1.9
CDKL5-211ENST00000637881 LCE3AQ5TA76 89 aa3.15□□□□□ -1.91
CDKL5-211ENST00000637881 KRTAP2-3P0C7H8 128 aa3.1□□□□□ -1.91
CDKL5-211ENST00000637881 KRTAP2-4Q9BYR9 128 aa3.1□□□□□ -1.91
CDKL5-211ENST00000637881 MACF1Q9UPN3 7388 aaKnown RBP3.1□□□□□ -1.91
CDKL5-211ENST00000637881 KRTAP10-12P60413 245 aa3.09□□□□□ -1.91
CDKL5-211ENST00000637881 FCGBPQ9Y6R7 5405 aaPredicted RBP3.05□□□□□ -1.92
CDKL5-211ENST00000637881 USH2AO75445 5202 aa3.03□□□□□ -1.92
CDKL5-211ENST00000637881 KRTAP12-3P60328 96 aa3.01□□□□□ -1.93
CDKL5-211ENST00000637881 SPRR2GQ9BYE4 73 aa3.01□□□□□ -1.93
CDKL5-211ENST00000637881 KRTAP10-5P60370 271 aa3□□□□□ -1.93
CDKL5-211ENST00000637881 LCE1AQ5T7P2 110 aa2.97□□□□□ -1.93
CDKL5-211ENST00000637881 MT1BP07438 61 aa2.95□□□□□ -1.94
CDKL5-211ENST00000637881 KRTAP19-8Q3LI54 63 aa2.95□□□□□ -1.94
CDKL5-211ENST00000637881 KRTAP2-2Q9BYT5 123 aa2.95□□□□□ -1.94
CDKL5-211ENST00000637881 KRTAP2-1Q9BYU5 128 aa2.95□□□□□ -1.94
CDKL5-211ENST00000637881 KMT2DO14686 5537 aa2.91□□□□□ -1.94
CDKL5-211ENST00000637881 KRTAP19-6Q3LI70 58 aa2.89□□□□□ -1.95
CDKL5-211ENST00000637881 LCE3CQ5T5A8 94 aa2.87□□□□□ -1.95
CDKL5-211ENST00000637881 MT1XP80297 61 aa2.82□□□□□ -1.96
CDKL5-211ENST00000637881 MUC12Q9UKN1 5478 aa2.81□□□□□ -1.96
CDKL5-211ENST00000637881 KRTAP10-7P60409 375 aaPredicted RBP2.81□□□□□ -1.96
CDKL5-211ENST00000637881 KRTAP5-7Q6L8G8 165 aa2.76□□□□□ -1.97
CDKL5-211ENST00000637881 AHNAK2Q8IVF2 5795 aa2.72□□□□□ -1.97
CDKL5-211ENST00000637881 KRTAP9-6A8MVA2 160 aa2.72□□□□□ -1.97
CDKL5-211ENST00000637881 KRTAP19-5Q3LI72 72 aa2.72□□□□□ -1.97
CDKL5-211ENST00000637881 MT3P25713 68 aa2.71□□□□□ -1.98
CDKL5-211ENST00000637881 KRTAP5-10Q6L8G5 202 aa2.69□□□□□ -1.98
CDKL5-211ENST00000637881 KRTAP5-9P26371 169 aa2.66□□□□□ -1.98
CDKL5-211ENST00000637881 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.65□□□□□ -1.99
CDKL5-211ENST00000637881 KRTAP12-4P60329 112 aa2.62□□□□□ -1.99
CDKL5-211ENST00000637881 MDN1Q9NU22 5596 aa2.61□□□□□ -1.99
CDKL5-211ENST00000637881 SPRR2FQ96RM1 72 aa2.61□□□□□ -1.99
CDKL5-211ENST00000637881 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
CDKL5-211ENST00000637881 SPRR2EP22531 72 aa2.56□□□□□ -2
CDKL5-211ENST00000637881 SPRR2BP35325 72 aa2.56□□□□□ -2
CDKL5-211ENST00000637881 SPRR2AP35326 72 aa2.56□□□□□ -2
CDKL5-211ENST00000637881 LCE1EQ5T753 118 aa2.56□□□□□ -2
CDKL5-211ENST00000637881 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
CDKL5-211ENST00000637881 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
CDKL5-211ENST00000637881 KRTAP19-7Q3SYF9 63 aa2.51□□□□□ -2.01
CDKL5-211ENST00000637881 DSTQ03001 7570 aaKnown RBP2.49□□□□□ -2.01
CDKL5-211ENST00000637881 SPRR2DP22532 72 aa2.49□□□□□ -2.01
CDKL5-211ENST00000637881 MT1EP04732 61 aa2.48□□□□□ -2.01
CDKL5-211ENST00000637881 MT1LQ93083 61 aa2.44□□□□□ -2.02
CDKL5-211ENST00000637881 HMCN1Q96RW7 5635 aa2.44□□□□□ -2.02
CDKL5-211ENST00000637881 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
CDKL5-211ENST00000637881 KRTAP19-3Q7Z4W3 81 aa2.42□□□□□ -2.02
CDKL5-211ENST00000637881 MT1AP04731 61 aa2.41□□□□□ -2.02
CDKL5-211ENST00000637881 PRM1P04553 51 aa2.38□□□□□ -2.03
CDKL5-211ENST00000637881 MT1GP13640 62 aa2.38□□□□□ -2.03
CDKL5-211ENST00000637881 MT1MQ8N339 61 aa2.36□□□□□ -2.03
CDKL5-211ENST00000637881 KRTAP4-3Q9BYR4 195 aa2.36□□□□□ -2.03
CDKL5-211ENST00000637881 LCE3EQ5T5B0 92 aa2.33□□□□□ -2.04
CDKL5-211ENST00000637881 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
CDKL5-211ENST00000637881 MUC5ACP98088 5654 aa2.31□□□□□ -2.04
CDKL5-211ENST00000637881 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
CDKL5-211ENST00000637881 KRTAP5-4Q6L8H1 288 aa2.26□□□□□ -2.05
CDKL5-211ENST00000637881 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
CDKL5-211ENST00000637881 MT4P47944 62 aa2.17□□□□□ -2.06
CDKL5-211ENST00000637881 KRTAP6-2Q3LI66 62 aa2.16□□□□□ -2.06
CDKL5-211ENST00000637881 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.06
CDKL5-211ENST00000637881 SYNE1Q8NF91 8797 aaKnown RBP2.13□□□□□ -2.07
CDKL5-211ENST00000637881 KRTAP6-1Q3LI64 71 aa2.05□□□□□ -2.08
CDKL5-211ENST00000637881 KRTAP20-2Q3LI61 65 aa1.99□□□□□ -2.09
CDKL5-211ENST00000637881 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
CDKL5-211ENST00000637881 OBSCNQ5VST9 7968 aa1.95□□□□□ -2.1
CDKL5-211ENST00000637881 KRTAP5-2Q701N4 177 aa1.92□□□□□ -2.1
CDKL5-211ENST00000637881 LCE1CQ5T751 118 aa1.67□□□□□ -2.14
CDKL5-211ENST00000637881 LCE1BQ5T7P3 118 aa1.67□□□□□ -2.14
CDKL5-211ENST00000637881 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
CDKL5-211ENST00000637881 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
CDKL5-211ENST00000637881 MUC19Q7Z5P9 8384 aa1.35□□□□□ -2.19
CDKL5-211ENST00000637881 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
CDKL5-211ENST00000637881 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 114.1 ms