RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 KRTAP9-6A0A140TA67 174 aa6.25□□□□□ -1.41
CTSD-212ENST00000637815 INE1O15225 51 aa6.19□□□□□ -1.42
CTSD-212ENST00000637815 KRTAP19-3Q7Z4W3 81 aa6.17□□□□□ -1.42
CTSD-212ENST00000637815 KRTAP2-3P0C7H8 128 aa6.16□□□□□ -1.42
CTSD-212ENST00000637815 KRTAP2-4Q9BYR9 128 aa6.16□□□□□ -1.42
CTSD-212ENST00000637815 KRTAP2-1Q9BYU5 128 aa6.16□□□□□ -1.42
CTSD-212ENST00000637815 MUC12Q9UKN1 5478 aa6.16□□□□□ -1.42
CTSD-212ENST00000637815 MT1GP13640 62 aa6.15□□□□□ -1.43
CTSD-212ENST00000637815 MT1MQ8N339 61 aa6.13□□□□□ -1.43
CTSD-212ENST00000637815 KRTAP4-3Q9BYR4 195 aa6.08□□□□□ -1.44
CTSD-212ENST00000637815 SPRR2FQ96RM1 72 aa6.03□□□□□ -1.44
CTSD-212ENST00000637815 MACF1Q9UPN3 7388 aaKnown RBP6.01□□□□□ -1.45
CTSD-212ENST00000637815 LCE5AQ5TCM9 118 aa6.01□□□□□ -1.45
CTSD-212ENST00000637815 LOC100996750A0A140TA64 210 aa5.99□□□□□ -1.45
CTSD-212ENST00000637815 SYNE2Q8WXH0 6885 aaKnown RBP5.86□□□□□ -1.47
CTSD-212ENST00000637815 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.82□□□□□ -1.48
CTSD-212ENST00000637815 KRTAP5-9P26371 169 aa5.79□□□□□ -1.48
CTSD-212ENST00000637815 DSTQ03001 7570 aaKnown RBP5.75□□□□□ -1.49
CTSD-212ENST00000637815 LCE1AQ5T7P2 110 aa5.7□□□□□ -1.5
CTSD-212ENST00000637815 MDN1Q9NU22 5596 aa5.69□□□□□ -1.5
CTSD-212ENST00000637815 KRTAP9-7A8MTY7 169 aa5.67□□□□□ -1.5
CTSD-212ENST00000637815 SPRR2EP22531 72 aa5.56□□□□□ -1.52
CTSD-212ENST00000637815 SPRR2BP35325 72 aa5.56□□□□□ -1.52
CTSD-212ENST00000637815 SPRR2AP35326 72 aa5.56□□□□□ -1.52
CTSD-212ENST00000637815 MT1AP04731 61 aa5.49□□□□□ -1.53
CTSD-212ENST00000637815 KRTAP6-1Q3LI64 71 aa5.48□□□□□ -1.53
CTSD-212ENST00000637815 KRTAP5-5Q701N2 237 aaPredicted RBP5.48□□□□□ -1.53
CTSD-212ENST00000637815 LCE3BQ5TA77 95 aa5.46□□□□□ -1.54
CTSD-212ENST00000637815 KRTAP6-3Q3LI67 103 aa5.43□□□□□ -1.54
CTSD-212ENST00000637815 SPRR2DP22532 72 aa5.34□□□□□ -1.55
CTSD-212ENST00000637815 KRTAP12-4P60329 112 aa5.32□□□□□ -1.56
CTSD-212ENST00000637815 KRTAP4-9Q9BYQ8 210 aa5.27□□□□□ -1.57
CTSD-212ENST00000637815 NEBP20929 6669 aa5.24□□□□□ -1.57
CTSD-212ENST00000637815 SYNE1Q8NF91 8797 aaKnown RBP5.21□□□□□ -1.57
CTSD-212ENST00000637815 KRTAP9-4Q9BYQ2 154 aa5.18□□□□□ -1.58
CTSD-212ENST00000637815 LCE3DQ9BYE3 92 aa5.12□□□□□ -1.59
CTSD-212ENST00000637815 LCE3EQ5T5B0 92 aa5.04□□□□□ -1.6
CTSD-212ENST00000637815 KRTAP5-4Q6L8H1 288 aa4.97□□□□□ -1.61
CTSD-212ENST00000637815 KRTAP20-1Q3LI63 56 aa4.95□□□□□ -1.62
CTSD-212ENST00000637815 KRTAP6-2Q3LI66 62 aa4.95□□□□□ -1.62
CTSD-212ENST00000637815 MT3P25713 68 aa4.93□□□□□ -1.62
CTSD-212ENST00000637815 KRTAP2-2Q9BYT5 123 aa4.72□□□□□ -1.65
CTSD-212ENST00000637815 LCE4AQ5TA78 99 aa4.71□□□□□ -1.66
CTSD-212ENST00000637815 KRTAP4-6Q9BYQ5 205 aa4.7□□□□□ -1.66
CTSD-212ENST00000637815 PRM1P04553 51 aa4.67□□□□□ -1.66
CTSD-212ENST00000637815 MT4P47944 62 aa4.65□□□□□ -1.67
CTSD-212ENST00000637815 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
CTSD-212ENST00000637815 KRTAP5-2Q701N4 177 aa4.61□□□□□ -1.67
CTSD-212ENST00000637815 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
CTSD-212ENST00000637815 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
CTSD-212ENST00000637815 LCE1DQ5T752 114 aa4.47□□□□□ -1.69
CTSD-212ENST00000637815 KRTAP5-3Q6L8H2 238 aa4.44□□□□□ -1.7
CTSD-212ENST00000637815 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
CTSD-212ENST00000637815 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
CTSD-212ENST00000637815 AHNAK2Q8IVF2 5795 aa4.01□□□□□ -1.77
CTSD-212ENST00000637815 GPR98Q8WXG9 6306 aa3.99□□□□□ -1.77
CTSD-212ENST00000637815 KRTAP5-10Q6L8G5 202 aa3.94□□□□□ -1.78
CTSD-212ENST00000637815 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
CTSD-212ENST00000637815 KRTAP5-1Q6L8H4 278 aa3.91□□□□□ -1.78
CTSD-212ENST00000637815 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
CTSD-212ENST00000637815 KRTAP4-2Q9BYR5 136 aa3.89□□□□□ -1.79
CTSD-212ENST00000637815 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
CTSD-212ENST00000637815 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
CTSD-212ENST00000637815 KRTAP5-7Q6L8G8 165 aa3.7□□□□□ -1.82
CTSD-212ENST00000637815 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
CTSD-212ENST00000637815 KRTAP21-2Q3LI59 83 aa3.58□□□□□ -1.84
CTSD-212ENST00000637815 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
CTSD-212ENST00000637815 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
CTSD-212ENST00000637815 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
CTSD-212ENST00000637815 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.88
CTSD-212ENST00000637815 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
CTSD-212ENST00000637815 AHNAKQ09666 5890 aaKnown RBP3.13□□□□□ -1.91
CTSD-212ENST00000637815 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
CTSD-212ENST00000637815 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
CTSD-212ENST00000637815 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
CTSD-212ENST00000637815 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
CTSD-212ENST00000637815 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 301.4 ms