RNA–Protein interactions for RNA: ENST00000637568.1

ARID1B-227, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 5

Gene ARID1B, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-227ENST00000637568 UBR4Q5T4S7 5183 aa3.84□□□□□ -1.79
ARID1B-227ENST00000637568 LOC100996750A0A140TA64 210 aa3.84□□□□□ -1.8
ARID1B-227ENST00000637568 KRTAP19-7Q3SYF9 63 aa3.84□□□□□ -1.8
ARID1B-227ENST00000637568 ABCA13Q86UQ4 5058 aa3.82□□□□□ -1.8
ARID1B-227ENST00000637568 MT3P25713 68 aa3.82□□□□□ -1.8
ARID1B-227ENST00000637568 PKHD1L1Q86WI1 4243 aa3.81□□□□□ -1.8
ARID1B-227ENST00000637568 KRTAP4-3Q9BYR4 195 aa3.78□□□□□ -1.8
ARID1B-227ENST00000637568 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
ARID1B-227ENST00000637568 TNXBP22105 4242 aa3.76□□□□□ -1.81
ARID1B-227ENST00000637568 HMCN2Q8NDA2 5059 aa3.74□□□□□ -1.81
ARID1B-227ENST00000637568 KRTAP19-6Q3LI70 58 aa3.71□□□□□ -1.82
ARID1B-227ENST00000637568 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
ARID1B-227ENST00000637568 MT1AP04731 61 aa3.67□□□□□ -1.82
ARID1B-227ENST00000637568 KRTAP4-9Q9BYQ8 210 aa3.65□□□□□ -1.83
ARID1B-227ENST00000637568 RNF213Q63HN8 5207 aa3.62□□□□□ -1.83
ARID1B-227ENST00000637568 FAT4Q6V0I7 4981 aa3.61□□□□□ -1.83
ARID1B-227ENST00000637568 FSIP2Q5CZC0 6907 aa3.61□□□□□ -1.83
ARID1B-227ENST00000637568 LCE2DQ5TA82 110 aaPredicted RBP3.6□□□□□ -1.83
ARID1B-227ENST00000637568 MUC2Q02817 5179 aa3.56□□□□□ -1.84
ARID1B-227ENST00000637568 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
ARID1B-227ENST00000637568 LCE1DQ5T752 114 aa3.49□□□□□ -1.85
ARID1B-227ENST00000637568 LCE2AQ5TA79 106 aaPredicted RBP3.49□□□□□ -1.85
ARID1B-227ENST00000637568 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
ARID1B-227ENST00000637568 FCGBPQ9Y6R7 5405 aaPredicted RBP3.46□□□□□ -1.85
ARID1B-227ENST00000637568 MT4P47944 62 aa3.46□□□□□ -1.86
ARID1B-227ENST00000637568 KRTAP6-1Q3LI64 71 aa3.44□□□□□ -1.86
ARID1B-227ENST00000637568 KRTAP9-7A8MTY7 169 aa3.39□□□□□ -1.87
ARID1B-227ENST00000637568 SYNE2Q8WXH0 6885 aaKnown RBP3.37□□□□□ -1.87
ARID1B-227ENST00000637568 LCE5AQ5TCM9 118 aa3.37□□□□□ -1.87
ARID1B-227ENST00000637568 KRTAP9-2Q9BYQ4 174 aa3.36□□□□□ -1.87
ARID1B-227ENST00000637568 DSTQ03001 7570 aaKnown RBP3.35□□□□□ -1.87
ARID1B-227ENST00000637568 KRTAP9-4Q9BYQ2 154 aa3.33□□□□□ -1.88
ARID1B-227ENST00000637568 LCE1AQ5T7P2 110 aa3.31□□□□□ -1.88
ARID1B-227ENST00000637568 USH2AO75445 5202 aa3.29□□□□□ -1.88
ARID1B-227ENST00000637568 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
ARID1B-227ENST00000637568 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
ARID1B-227ENST00000637568 KRTAP9-6A0A140TA67 174 aa3.16□□□□□ -1.9
ARID1B-227ENST00000637568 KMT2DO14686 5537 aa3.08□□□□□ -1.92
ARID1B-227ENST00000637568 MACF1Q9UPN3 7388 aaKnown RBP3.07□□□□□ -1.92
ARID1B-227ENST00000637568 KRTAP6-3Q3LI67 103 aa3.05□□□□□ -1.92
ARID1B-227ENST00000637568 LCE4AQ5TA78 99 aa3.04□□□□□ -1.92
ARID1B-227ENST00000637568 MUC12Q9UKN1 5478 aa2.91□□□□□ -1.94
ARID1B-227ENST00000637568 SSPOA2VEC9 5147 aa2.9□□□□□ -1.95
ARID1B-227ENST00000637568 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
ARID1B-227ENST00000637568 KRTAP20-1Q3LI63 56 aa2.84□□□□□ -1.95
ARID1B-227ENST00000637568 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
ARID1B-227ENST00000637568 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
ARID1B-227ENST00000637568 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
ARID1B-227ENST00000637568 KRTAP5-5Q701N2 237 aaPredicted RBP2.81□□□□□ -1.96
ARID1B-227ENST00000637568 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.81□□□□□ -1.96
ARID1B-227ENST00000637568 KRTAP5-9P26371 169 aa2.73□□□□□ -1.97
ARID1B-227ENST00000637568 MDN1Q9NU22 5596 aa2.73□□□□□ -1.97
ARID1B-227ENST00000637568 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
ARID1B-227ENST00000637568 KRTAP4-6Q9BYQ5 205 aa2.64□□□□□ -1.99
ARID1B-227ENST00000637568 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
ARID1B-227ENST00000637568 NEBP20929 6669 aa2.53□□□□□ -2
ARID1B-227ENST00000637568 KRTAP9-9Q9BYP9 154 aa2.53□□□□□ -2.01
ARID1B-227ENST00000637568 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.01
ARID1B-227ENST00000637568 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
ARID1B-227ENST00000637568 KRTAP5-4Q6L8H1 288 aa2.36□□□□□ -2.03
ARID1B-227ENST00000637568 KRTAP4-12Q9BQ66 201 aa2.32□□□□□ -2.04
ARID1B-227ENST00000637568 KRTAP4-2Q9BYR5 136 aa2.32□□□□□ -2.04
ARID1B-227ENST00000637568 HMCN1Q96RW7 5635 aa2.29□□□□□ -2.04
ARID1B-227ENST00000637568 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
ARID1B-227ENST00000637568 KRTAP5-3Q6L8H2 238 aa2.08□□□□□ -2.08
ARID1B-227ENST00000637568 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
ARID1B-227ENST00000637568 KRTAP5-2Q701N4 177 aa2□□□□□ -2.09
ARID1B-227ENST00000637568 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
ARID1B-227ENST00000637568 KRTAP5-1Q6L8H4 278 aa1.84□□□□□ -2.11
ARID1B-227ENST00000637568 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
ARID1B-227ENST00000637568 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
ARID1B-227ENST00000637568 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
ARID1B-227ENST00000637568 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
ARID1B-227ENST00000637568 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
ARID1B-227ENST00000637568 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
ARID1B-227ENST00000637568 KRTAP5-7Q6L8G8 165 aa1.59□□□□□ -2.15
ARID1B-227ENST00000637568 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
ARID1B-227ENST00000637568 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 7.8 ms