RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	LCE3C	Q5T5A8	94 aa		5.2	□□□□□ -1.58
NEDD4L-238	ENST00000635997	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.16	□□□□□ -1.58
NEDD4L-238	ENST00000635997	KRTAP20-1	Q3LI63	56 aa		5.09	□□□□□ -1.6
NEDD4L-238	ENST00000635997	MT1G	P13640	62 aa		5.03	□□□□□ -1.61
NEDD4L-238	ENST00000635997	KRTAP12-4	P60329	112 aa		5.02	□□□□□ -1.61
NEDD4L-238	ENST00000635997	KRTAP6-3	Q3LI67	103 aa		5	□□□□□ -1.61
NEDD4L-238	ENST00000635997	KRTAP4-7	Q9BYR0	210 aa		4.97	□□□□□ -1.61
NEDD4L-238	ENST00000635997	LCE3B	Q5TA77	95 aa		4.94	□□□□□ -1.62
NEDD4L-238	ENST00000635997	KRTAP19-4	Q3LI73	84 aa		4.92	□□□□□ -1.62
NEDD4L-238	ENST00000635997	KRTAP19-3	Q7Z4W3	81 aa		4.9	□□□□□ -1.63
NEDD4L-238	ENST00000635997	KMT2D	O14686	5537 aa		4.86	□□□□□ -1.63
NEDD4L-238	ENST00000635997	MT4	P47944	62 aa		4.86	□□□□□ -1.63
NEDD4L-238	ENST00000635997	DST	Q03001	7570 aa	Known RBP	4.86	□□□□□ -1.63
NEDD4L-238	ENST00000635997	KRTAP2-3	P0C7H8	128 aa		4.84	□□□□□ -1.63
NEDD4L-238	ENST00000635997	KRTAP2-4	Q9BYR9	128 aa		4.84	□□□□□ -1.63
NEDD4L-238	ENST00000635997	MACF1	Q9UPN3	7388 aa	Known RBP	4.84	□□□□□ -1.63
NEDD4L-238	ENST00000635997	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.81	□□□□□ -1.64
NEDD4L-238	ENST00000635997	USH2A	O75445	5202 aa		4.79	□□□□□ -1.64
NEDD4L-238	ENST00000635997	MT1E	P04732	61 aa		4.76	□□□□□ -1.65
NEDD4L-238	ENST00000635997	MT1L	Q93083	61 aa		4.76	□□□□□ -1.65
NEDD4L-238	ENST00000635997	KRTAP4-3	Q9BYR4	195 aa		4.7	□□□□□ -1.66
NEDD4L-238	ENST00000635997	KRTAP2-2	Q9BYT5	123 aa		4.69	□□□□□ -1.66
NEDD4L-238	ENST00000635997	KRTAP2-1	Q9BYU5	128 aa		4.69	□□□□□ -1.66
NEDD4L-238	ENST00000635997	LCE1A	Q5T7P2	110 aa		4.63	□□□□□ -1.67
NEDD4L-238	ENST00000635997	LOC100996750	A0A140TA64	210 aa		4.62	□□□□□ -1.67
NEDD4L-238	ENST00000635997	MT1M	Q8N339	61 aa		4.6	□□□□□ -1.67
NEDD4L-238	ENST00000635997	KRTAP19-7	Q3SYF9	63 aa		4.57	□□□□□ -1.68
NEDD4L-238	ENST00000635997	NEB	P20929	6669 aa		4.55	□□□□□ -1.68
NEDD4L-238	ENST00000635997	GPR98	Q8WXG9	6306 aa		4.52	□□□□□ -1.69
NEDD4L-238	ENST00000635997	KRTAP4-9	Q9BYQ8	210 aa		4.52	□□□□□ -1.69
NEDD4L-238	ENST00000635997	LCE3D	Q9BYE3	92 aa		4.48	□□□□□ -1.69
NEDD4L-238	ENST00000635997	MDN1	Q9NU22	5596 aa		4.46	□□□□□ -1.7
NEDD4L-238	ENST00000635997	SSPO	A2VEC9	5147 aa		4.44	□□□□□ -1.7
NEDD4L-238	ENST00000635997	MUC12	Q9UKN1	5478 aa		4.37	□□□□□ -1.71
NEDD4L-238	ENST00000635997	LCE3E	Q5T5B0	92 aa		4.37	□□□□□ -1.71
NEDD4L-238	ENST00000635997	KRTAP9-6	A8MVA2	160 aa		4.36	□□□□□ -1.71
NEDD4L-238	ENST00000635997	LCE4A	Q5TA78	99 aa		4.33	□□□□□ -1.72
NEDD4L-238	ENST00000635997	MT3	P25713	68 aa		4.32	□□□□□ -1.72
NEDD4L-238	ENST00000635997	LCE5A	Q5TCM9	118 aa		4.26	□□□□□ -1.73
NEDD4L-238	ENST00000635997	KRTAP5-9	P26371	169 aa		4.24	□□□□□ -1.73
NEDD4L-238	ENST00000635997	LCE1D	Q5T752	114 aa		4.23	□□□□□ -1.73
NEDD4L-238	ENST00000635997	LCE1B	Q5T7P3	118 aa		4.2	□□□□□ -1.74
NEDD4L-238	ENST00000635997	PRM1	P04553	51 aa		4.16	□□□□□ -1.74
NEDD4L-238	ENST00000635997	MT1A	P04731	61 aa		4.14	□□□□□ -1.75
NEDD4L-238	ENST00000635997	KRTAP6-1	Q3LI64	71 aa		4.07	□□□□□ -1.76
NEDD4L-238	ENST00000635997	KRTAP6-2	Q3LI66	62 aa		3.98	□□□□□ -1.77
NEDD4L-238	ENST00000635997	MUC19	Q7Z5P9	8384 aa		3.92	□□□□□ -1.78
NEDD4L-238	ENST00000635997	KRTAP4-6	Q9BYQ5	205 aa		3.84	□□□□□ -1.79
NEDD4L-238	ENST00000635997	KRTAP9-4	Q9BYQ2	154 aa		3.84	□□□□□ -1.8
NEDD4L-238	ENST00000635997	KRTAP9-9	Q9BYP9	154 aa		3.83	□□□□□ -1.8
NEDD4L-238	ENST00000635997	KRTAP20-2	Q3LI61	65 aa		3.7	□□□□□ -1.82
NEDD4L-238	ENST00000635997	LCE1C	Q5T751	118 aa		3.61	□□□□□ -1.83
NEDD4L-238	ENST00000635997	LCE1E	Q5T753	118 aa		3.61	□□□□□ -1.83
NEDD4L-238	ENST00000635997	LCE1F	Q5T754	118 aa		3.61	□□□□□ -1.83
NEDD4L-238	ENST00000635997	KRTAP5-4	Q6L8H1	288 aa		3.5	□□□□□ -1.85
NEDD4L-238	ENST00000635997	AHNAK2	Q8IVF2	5795 aa		3.49	□□□□□ -1.85
NEDD4L-238	ENST00000635997	KRTAP5-3	Q6L8H2	238 aa		3.49	□□□□□ -1.85
NEDD4L-238	ENST00000635997	KRTAP4-11	Q9BYQ6	195 aa		3.48	□□□□□ -1.85
NEDD4L-238	ENST00000635997	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.4	□□□□□ -1.86
NEDD4L-238	ENST00000635997	MUC5AC	P98088	5654 aa		3.36	□□□□□ -1.87
NEDD4L-238	ENST00000635997	HMCN1	Q96RW7	5635 aa		3.36	□□□□□ -1.87
NEDD4L-238	ENST00000635997	KRTAP4-12	Q9BQ66	201 aa		3.18	□□□□□ -1.9
NEDD4L-238	ENST00000635997	KRTAP4-2	Q9BYR5	136 aa		3.18	□□□□□ -1.9
NEDD4L-238	ENST00000635997	KRTAP5-8	O75690	187 aa		3.08	□□□□□ -1.92
NEDD4L-238	ENST00000635997	KRTAP4-4	Q9BYR3	166 aa		3.07	□□□□□ -1.92
NEDD4L-238	ENST00000635997	AHNAK	Q09666	5890 aa	Known RBP	2.96	□□□□□ -1.94
NEDD4L-238	ENST00000635997	KRTAP5-10	Q6L8G5	202 aa		2.84	□□□□□ -1.96
NEDD4L-238	ENST00000635997	KRTAP5-7	Q6L8G8	165 aa		2.77	□□□□□ -1.97
NEDD4L-238	ENST00000635997	KRTAP5-2	Q701N4	177 aa		2.75	□□□□□ -1.97
NEDD4L-238	ENST00000635997	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.7	□□□□□ -1.98
NEDD4L-238	ENST00000635997	PHGR1	C9JFL3	82 aa		2.65	□□□□□ -1.99
NEDD4L-238	ENST00000635997	KRTAP5-1	Q6L8H4	278 aa		2.52	□□□□□ -2.01
NEDD4L-238	ENST00000635997	KRTAP5-11	Q6L8G4	156 aa		2.35	□□□□□ -2.03
NEDD4L-238	ENST00000635997	KRTAP21-2	Q3LI59	83 aa		2.27	□□□□□ -2.05
NEDD4L-238	ENST00000635997	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.16	□□□□□ -2.06
NEDD4L-238	ENST00000635997	KRTAP21-1	Q3LI58	79 aa		2.13	□□□□□ -2.07
NEDD4L-238	ENST00000635997	MUC16	Q8WXI7	14507 aa		1.51	□□□□□ -2.17

Retrieved 77 of 20,778 RNA–protein pairs in 5.6 ms