RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 TRAV22A0A0B4J277 110 aa0.21□□□□□ -2.38
SMARCB1-209ENST00000635578 KRTAP6-2Q3LI66 62 aa0.21□□□□□ -2.38
SMARCB1-209ENST00000635578 CSAG1Q6PB30 78 aa0.21□□□□□ -2.38
SMARCB1-209ENST00000635578 SPATA8Q6RVD6 105 aa0.21□□□□□ -2.38
SMARCB1-209ENST00000635578 PLAC4Q8WY50 150 aa0.21□□□□□ -2.38
SMARCB1-209ENST00000635578 PRO1854Q9UHT4 67 aa0.21□□□□□ -2.38
SMARCB1-209ENST00000635578 LOC110117498A0A087WWA1 95 aa0.2□□□□□ -2.38
SMARCB1-209ENST00000635578 A0A1B0GX51 115 aa0.2□□□□□ -2.38
SMARCB1-209ENST00000635578 LINC00587B1AMM8 73 aa0.2□□□□□ -2.38
SMARCB1-209ENST00000635578 TSTD3H0UI37 97 aa0.2□□□□□ -2.38
SMARCB1-209ENST00000635578 NDUFB1O75438 58 aa0.2□□□□□ -2.38
SMARCB1-209ENST00000635578 MT1AP04731 61 aa0.2□□□□□ -2.38
SMARCB1-209ENST00000635578 ATXN8Q156A1 80 aa0.2□□□□□ -2.38
SMARCB1-209ENST00000635578 PPDPFLQ8WWR9 84 aa0.2□□□□□ -2.38
SMARCB1-209ENST00000635578 LINC00208Q96KT6 92 aa0.2□□□□□ -2.38
SMARCB1-209ENST00000635578 CDC42SE1Q9NRR8 79 aa0.2□□□□□ -2.38
SMARCB1-209ENST00000635578 H0YGX0 51 aa0.19□□□□□ -2.38
SMARCB1-209ENST00000635578 J3KT08 172 aa0.19□□□□□ -2.38
SMARCB1-209ENST00000635578 TAX1BP3O14907 124 aa0.19□□□□□ -2.38
SMARCB1-209ENST00000635578 S100A6P06703 90 aa0.19□□□□□ -2.38
SMARCB1-209ENST00000635578 PMAIP1Q13794 54 aa0.19□□□□□ -2.38
SMARCB1-209ENST00000635578 NREPQ16612 68 aa0.19□□□□□ -2.38
SMARCB1-209ENST00000635578 COPS9Q8WXC6 57 aa0.19□□□□□ -2.38
SMARCB1-209ENST00000635578 CYP4F30PQ9H0H9 118 aa0.19□□□□□ -2.38
SMARCB1-209ENST00000635578 HIGD1BQ9P298 99 aa0.19□□□□□ -2.38
SMARCB1-209ENST00000635578 LOC101927531A0A1B0GV80 90 aa0.18□□□□□ -2.38
SMARCB1-209ENST00000635578 PHGR1C9JFL3 82 aa0.18□□□□□ -2.38
SMARCB1-209ENST00000635578 TMEM256-PLSCR3K7ERE1 68 aa0.18□□□□□ -2.38
SMARCB1-209ENST00000635578 DLEU1O43261 78 aa0.18□□□□□ -2.38
SMARCB1-209ENST00000635578 NDUFC1O43677 76 aa0.18□□□□□ -2.38
SMARCB1-209ENST00000635578 ACYP1P07311 99 aa0.18□□□□□ -2.38
SMARCB1-209ENST00000635578 ETDBQ3ZM63 59 aa0.18□□□□□ -2.38
SMARCB1-209ENST00000635578 DMAC1Q96GE9 116 aa0.18□□□□□ -2.38
SMARCB1-209ENST00000635578 UQCR10Q9UDW1 63 aa0.18□□□□□ -2.38
SMARCB1-209ENST00000635578 JMJD7-PLA2G4BH0Y9G9 81 aa0.17□□□□□ -2.38
SMARCB1-209ENST00000635578 COX6CP09669 75 aa0.17□□□□□ -2.38
SMARCB1-209ENST00000635578 S100A1P23297 94 aa0.17□□□□□ -2.38
SMARCB1-209ENST00000635578 UBL5Q9BZL1 73 aa0.17□□□□□ -2.38
SMARCB1-209ENST00000635578 CRIPTQ9P021 101 aa0.17□□□□□ -2.38
SMARCB1-209ENST00000635578 A0A1B0GV90 55 aa0.16□□□□□ -2.38
SMARCB1-209ENST00000635578 CHKB-CPT1BH3BT56 60 aa0.16□□□□□ -2.38
SMARCB1-209ENST00000635578 M0R143 59 aa0.16□□□□□ -2.38
SMARCB1-209ENST00000635578 SMIM6P0DI80 62 aa0.16□□□□□ -2.38
SMARCB1-209ENST00000635578 TP53AIP1Q9HCN2 124 aa0.16□□□□□ -2.38
SMARCB1-209ENST00000635578 LOC105371267A0A1B0GV96 52 aa0.15□□□□□ -2.39
SMARCB1-209ENST00000635578 UQCRQO14949 82 aa0.15□□□□□ -2.39
SMARCB1-209ENST00000635578 INE1O15225 51 aa0.15□□□□□ -2.39
SMARCB1-209ENST00000635578 SNCGO76070 127 aa0.15□□□□□ -2.39
SMARCB1-209ENST00000635578 TNP1P09430 55 aa0.15□□□□□ -2.39
SMARCB1-209ENST00000635578 C20orf197Q8N268 126 aa0.15□□□□□ -2.39
SMARCB1-209ENST00000635578 ATOX1O00244 68 aa0.14□□□□□ -2.39
SMARCB1-209ENST00000635578 ACYP2P14621 99 aa0.14□□□□□ -2.39
SMARCB1-209ENST00000635578 A0A1B0GU69 56 aa0.13□□□□□ -2.39
SMARCB1-209ENST00000635578 F8W1H4 67 aa0.13□□□□□ -2.39
SMARCB1-209ENST00000635578 ATP5EP2Q5VTU8 51 aa0.13□□□□□ -2.39
SMARCB1-209ENST00000635578 PRR15LQ9BU68 103 aa0.13□□□□□ -2.39
SMARCB1-209ENST00000635578 CCDC179H3BU77 68 aa0.12□□□□□ -2.39
SMARCB1-209ENST00000635578 H7BZZ5 65 aa0.12□□□□□ -2.39
SMARCB1-209ENST00000635578 KRTAP21-1Q3LI58 79 aa0.12□□□□□ -2.39
SMARCB1-209ENST00000635578 COL5A1-AS1Q5SY13 56 aa0.12□□□□□ -2.39
SMARCB1-209ENST00000635578 GTF2H5Q6ZYL4 71 aa0.12□□□□□ -2.39
SMARCB1-209ENST00000635578 LINC00643Q86TS7 51 aa0.12□□□□□ -2.39
SMARCB1-209ENST00000635578 SCGB1A1P11684 91 aa0.11□□□□□ -2.39
SMARCB1-209ENST00000635578 COX7CP15954 63 aa0.11□□□□□ -2.39
SMARCB1-209ENST00000635578 SERP2Q8N6R1 65 aa0.11□□□□□ -2.39
SMARCB1-209ENST00000635578 SPTSSBQ8NFR3 76 aa0.11□□□□□ -2.39
SMARCB1-209ENST00000635578 SERP1Q9Y6X1 66 aa0.11□□□□□ -2.39
SMARCB1-209ENST00000635578 MIR22HGQ0VDD5 57 aa0.1□□□□□ -2.39
SMARCB1-209ENST00000635578 PRM1P04553 51 aa0.08□□□□□ -2.4
SMARCB1-209ENST00000635578 ROMO1P60602 79 aa0.08□□□□□ -2.4
SMARCB1-209ENST00000635578 LINC01558Q9Y6Z2 57 aa0.08□□□□□ -2.4
SMARCB1-209ENST00000635578 UQCR11O14957 56 aa0.07□□□□□ -2.4
SMARCB1-209ENST00000635578 RPS28P62857 69 aaKnown RBP0.07□□□□□ -2.4
SMARCB1-209ENST00000635578 J3QR89 54 aa0.06□□□□□ -2.4
SMARCB1-209ENST00000635578 K7ERU9 68 aa0.06□□□□□ -2.4
SMARCB1-209ENST00000635578 SMIM20Q8N5G0 67 aa0.06□□□□□ -2.4
SMARCB1-209ENST00000635578 ATP5EP56381 51 aaPredicted RBP0.04□□□□□ -2.4
SMARCB1-209ENST00000635578 BRK1Q8WUW1 75 aa0.04□□□□□ -2.4
Retrieved 78 of 20,778 RNA–protein pairs in 42.3 ms