RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 KRTAP19-5Q3LI72 72 aa4□□□□□ -1.77
PSPC1-207ENST00000635251 KRTAP4-2Q9BYR5 136 aa3.96□□□□□ -1.78
PSPC1-207ENST00000635251 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
PSPC1-207ENST00000635251 USH2AO75445 5202 aa3.86□□□□□ -1.79
PSPC1-207ENST00000635251 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
PSPC1-207ENST00000635251 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
PSPC1-207ENST00000635251 KMT2DO14686 5537 aa3.81□□□□□ -1.8
PSPC1-207ENST00000635251 KRTAP19-7Q3SYF9 63 aa3.79□□□□□ -1.8
PSPC1-207ENST00000635251 KRTAP19-4Q3LI73 84 aa3.78□□□□□ -1.8
PSPC1-207ENST00000635251 KRTAP9-6A8MVA2 160 aa3.77□□□□□ -1.81
PSPC1-207ENST00000635251 SSPOA2VEC9 5147 aa3.75□□□□□ -1.81
PSPC1-207ENST00000635251 FCGBPQ9Y6R7 5405 aaPredicted RBP3.7□□□□□ -1.82
PSPC1-207ENST00000635251 LCE4AQ5TA78 99 aa3.7□□□□□ -1.82
PSPC1-207ENST00000635251 MT1LQ93083 61 aa3.7□□□□□ -1.82
PSPC1-207ENST00000635251 MT1EP04732 61 aa3.69□□□□□ -1.82
PSPC1-207ENST00000635251 LCE5AQ5TCM9 118 aa3.69□□□□□ -1.82
PSPC1-207ENST00000635251 SYNE2Q8WXH0 6885 aaKnown RBP3.67□□□□□ -1.82
PSPC1-207ENST00000635251 KRTAP5-3Q6L8H2 238 aa3.65□□□□□ -1.82
PSPC1-207ENST00000635251 KRTAP2-3P0C7H8 128 aa3.64□□□□□ -1.83
PSPC1-207ENST00000635251 KRTAP2-4Q9BYR9 128 aa3.64□□□□□ -1.83
PSPC1-207ENST00000635251 KRTAP2-1Q9BYU5 128 aa3.64□□□□□ -1.83
PSPC1-207ENST00000635251 MACF1Q9UPN3 7388 aaKnown RBP3.64□□□□□ -1.83
PSPC1-207ENST00000635251 KRTAP19-6Q3LI70 58 aa3.6□□□□□ -1.83
PSPC1-207ENST00000635251 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
PSPC1-207ENST00000635251 MT1GP13640 62 aa3.48□□□□□ -1.85
PSPC1-207ENST00000635251 KRTAP19-3Q7Z4W3 81 aa3.46□□□□□ -1.86
PSPC1-207ENST00000635251 KRTAP6-3Q3LI67 103 aa3.45□□□□□ -1.86
PSPC1-207ENST00000635251 MT1MQ8N339 61 aa3.45□□□□□ -1.86
PSPC1-207ENST00000635251 NEBP20929 6669 aa3.43□□□□□ -1.86
PSPC1-207ENST00000635251 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
PSPC1-207ENST00000635251 MUC12Q9UKN1 5478 aa3.39□□□□□ -1.87
PSPC1-207ENST00000635251 SPRR2FQ96RM1 72 aa3.35□□□□□ -1.87
PSPC1-207ENST00000635251 KRTAP20-1Q3LI63 56 aa3.32□□□□□ -1.88
PSPC1-207ENST00000635251 MDN1Q9NU22 5596 aa3.28□□□□□ -1.88
PSPC1-207ENST00000635251 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
PSPC1-207ENST00000635251 KRTAP12-4P60329 112 aa3.26□□□□□ -1.89
PSPC1-207ENST00000635251 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
PSPC1-207ENST00000635251 MT3P25713 68 aa3.21□□□□□ -1.9
PSPC1-207ENST00000635251 DSTQ03001 7570 aaKnown RBP3.18□□□□□ -1.9
PSPC1-207ENST00000635251 KRTAP5-9P26371 169 aa3.18□□□□□ -1.9
PSPC1-207ENST00000635251 LCE1AQ5T7P2 110 aa3.16□□□□□ -1.9
PSPC1-207ENST00000635251 KRTAP6-1Q3LI64 71 aa3.14□□□□□ -1.91
PSPC1-207ENST00000635251 MT1AP04731 61 aa3.11□□□□□ -1.91
PSPC1-207ENST00000635251 SPRR2EP22531 72 aa3.08□□□□□ -1.92
PSPC1-207ENST00000635251 SPRR2BP35325 72 aa3.08□□□□□ -1.92
PSPC1-207ENST00000635251 SPRR2AP35326 72 aa3.08□□□□□ -1.92
PSPC1-207ENST00000635251 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
PSPC1-207ENST00000635251 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
PSPC1-207ENST00000635251 SYNE1Q8NF91 8797 aaKnown RBP3.03□□□□□ -1.92
PSPC1-207ENST00000635251 KRTAP5-5Q701N2 237 aaPredicted RBP3.02□□□□□ -1.93
PSPC1-207ENST00000635251 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
PSPC1-207ENST00000635251 SPRR2DP22532 72 aa2.98□□□□□ -1.93
PSPC1-207ENST00000635251 PRM1P04553 51 aa2.89□□□□□ -1.95
PSPC1-207ENST00000635251 KRTAP6-2Q3LI66 62 aa2.82□□□□□ -1.96
PSPC1-207ENST00000635251 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
PSPC1-207ENST00000635251 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
PSPC1-207ENST00000635251 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
PSPC1-207ENST00000635251 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
PSPC1-207ENST00000635251 AHNAKQ09666 5890 aaKnown RBP2.65□□□□□ -1.98
PSPC1-207ENST00000635251 MT4P47944 62 aa2.65□□□□□ -1.99
PSPC1-207ENST00000635251 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
PSPC1-207ENST00000635251 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
PSPC1-207ENST00000635251 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -1.99
PSPC1-207ENST00000635251 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
PSPC1-207ENST00000635251 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
PSPC1-207ENST00000635251 KRTAP20-2Q3LI61 65 aa2.5□□□□□ -2.01
PSPC1-207ENST00000635251 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
PSPC1-207ENST00000635251 KRTAP5-1Q6L8H4 278 aa2.3□□□□□ -2.04
PSPC1-207ENST00000635251 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
PSPC1-207ENST00000635251 MUC5ACP98088 5654 aa2.28□□□□□ -2.05
PSPC1-207ENST00000635251 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
PSPC1-207ENST00000635251 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
PSPC1-207ENST00000635251 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
PSPC1-207ENST00000635251 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
PSPC1-207ENST00000635251 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
PSPC1-207ENST00000635251 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
PSPC1-207ENST00000635251 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
PSPC1-207ENST00000635251 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 12.9 ms