RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-208ENST00000634348 HERC2O95714 4834 aa3.29□□□□□ -1.88
SRSF4-208ENST00000634348 PCLOQ9Y6V0 5065 aa3.28□□□□□ -1.88
SRSF4-208ENST00000634348 LCE5AQ5TCM9 118 aa3.27□□□□□ -1.89
SRSF4-208ENST00000634348 HYDINQ4G0P3 5121 aa3.26□□□□□ -1.89
SRSF4-208ENST00000634348 KRTAP9-2Q9BYQ4 174 aa3.23□□□□□ -1.89
SRSF4-208ENST00000634348 KRTAP19-2Q3LHN2 52 aa3.19□□□□□ -1.9
SRSF4-208ENST00000634348 EPPK1P58107 5090 aaKnown RBP3.19□□□□□ -1.9
SRSF4-208ENST00000634348 MUC17Q685J3 4493 aa3.17□□□□□ -1.9
SRSF4-208ENST00000634348 KRTAP19-6Q3LI70 58 aa3.17□□□□□ -1.9
SRSF4-208ENST00000634348 RYR2Q92736 4967 aa3.16□□□□□ -1.9
SRSF4-208ENST00000634348 LCE4AQ5TA78 99 aa3.16□□□□□ -1.9
SRSF4-208ENST00000634348 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
SRSF4-208ENST00000634348 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
SRSF4-208ENST00000634348 BIRC6Q9NR09 4857 aa3.14□□□□□ -1.91
SRSF4-208ENST00000634348 KRTAP2-3P0C7H8 128 aa3.13□□□□□ -1.91
SRSF4-208ENST00000634348 KRTAP2-4Q9BYR9 128 aa3.13□□□□□ -1.91
SRSF4-208ENST00000634348 KRTAP2-1Q9BYU5 128 aa3.13□□□□□ -1.91
SRSF4-208ENST00000634348 MUC2Q02817 5179 aa3.13□□□□□ -1.91
SRSF4-208ENST00000634348 MT1AP04731 61 aa3.11□□□□□ -1.91
SRSF4-208ENST00000634348 HERC1Q15751 4861 aa3.09□□□□□ -1.91
SRSF4-208ENST00000634348 KRTAP19-7Q3SYF9 63 aa3.09□□□□□ -1.91
SRSF4-208ENST00000634348 KRTAP20-1Q3LI63 56 aa3.08□□□□□ -1.92
SRSF4-208ENST00000634348 UBR4Q5T4S7 5183 aa3.07□□□□□ -1.92
SRSF4-208ENST00000634348 KRTAP9-6A0A140TA67 174 aa3.07□□□□□ -1.92
SRSF4-208ENST00000634348 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
SRSF4-208ENST00000634348 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
SRSF4-208ENST00000634348 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
SRSF4-208ENST00000634348 LCE1AQ5T7P2 110 aa3.06□□□□□ -1.92
SRSF4-208ENST00000634348 HMCN2Q8NDA2 5059 aa3.05□□□□□ -1.92
SRSF4-208ENST00000634348 KRTAP6-1Q3LI64 71 aa3.01□□□□□ -1.93
SRSF4-208ENST00000634348 DSTQ03001 7570 aaKnown RBP3□□□□□ -1.93
SRSF4-208ENST00000634348 KRTAP9-7A8MTY7 169 aa2.97□□□□□ -1.93
SRSF4-208ENST00000634348 KRTAP2-2Q9BYT5 123 aa2.95□□□□□ -1.94
SRSF4-208ENST00000634348 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
SRSF4-208ENST00000634348 FCGBPQ9Y6R7 5405 aaPredicted RBP2.94□□□□□ -1.94
SRSF4-208ENST00000634348 FAT4Q6V0I7 4981 aa2.87□□□□□ -1.95
SRSF4-208ENST00000634348 MACF1Q9UPN3 7388 aaKnown RBP2.86□□□□□ -1.95
SRSF4-208ENST00000634348 LCE2AQ5TA79 106 aaPredicted RBP2.85□□□□□ -1.95
SRSF4-208ENST00000634348 KRTAP9-4Q9BYQ2 154 aa2.85□□□□□ -1.95
SRSF4-208ENST00000634348 ABCA13Q86UQ4 5058 aa2.85□□□□□ -1.95
SRSF4-208ENST00000634348 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
SRSF4-208ENST00000634348 RNF213Q63HN8 5207 aa2.78□□□□□ -1.96
SRSF4-208ENST00000634348 KMT2DO14686 5537 aa2.77□□□□□ -1.97
SRSF4-208ENST00000634348 KRTAP4-11Q9BYQ6 195 aa2.73□□□□□ -1.97
SRSF4-208ENST00000634348 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.72□□□□□ -1.97
SRSF4-208ENST00000634348 KRTAP6-3Q3LI67 103 aa2.69□□□□□ -1.98
SRSF4-208ENST00000634348 USH2AO75445 5202 aa2.66□□□□□ -1.98
SRSF4-208ENST00000634348 KRTAP9-9Q9BYP9 154 aa2.64□□□□□ -1.99
SRSF4-208ENST00000634348 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
SRSF4-208ENST00000634348 KRTAP20-2Q3LI61 65 aa2.52□□□□□ -2.01
SRSF4-208ENST00000634348 KRTAP4-6Q9BYQ5 205 aa2.5□□□□□ -2.01
SRSF4-208ENST00000634348 KRTAP4-12Q9BQ66 201 aa2.47□□□□□ -2.01
SRSF4-208ENST00000634348 KRTAP4-2Q9BYR5 136 aa2.47□□□□□ -2.01
SRSF4-208ENST00000634348 SSPOA2VEC9 5147 aa2.44□□□□□ -2.02
SRSF4-208ENST00000634348 MUC12Q9UKN1 5478 aa2.4□□□□□ -2.02
SRSF4-208ENST00000634348 NEBP20929 6669 aa2.32□□□□□ -2.04
SRSF4-208ENST00000634348 MDN1Q9NU22 5596 aa2.28□□□□□ -2.04
SRSF4-208ENST00000634348 KRTAP5-9P26371 169 aa2.14□□□□□ -2.07
SRSF4-208ENST00000634348 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
SRSF4-208ENST00000634348 GPR98Q8WXG9 6306 aa2.11□□□□□ -2.07
SRSF4-208ENST00000634348 MUC5ACP98088 5654 aa2.07□□□□□ -2.08
SRSF4-208ENST00000634348 KRTAP5-4Q6L8H1 288 aa1.98□□□□□ -2.09
SRSF4-208ENST00000634348 HMCN1Q96RW7 5635 aa1.85□□□□□ -2.11
SRSF4-208ENST00000634348 KRTAP5-3Q6L8H2 238 aa1.82□□□□□ -2.12
SRSF4-208ENST00000634348 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
SRSF4-208ENST00000634348 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
SRSF4-208ENST00000634348 KRTAP5-2Q701N4 177 aa1.68□□□□□ -2.14
SRSF4-208ENST00000634348 KRTAP5-10Q6L8G5 202 aa1.66□□□□□ -2.14
SRSF4-208ENST00000634348 MUC5BQ9HC84 5762 aaPredicted RBP1.63□□□□□ -2.15
SRSF4-208ENST00000634348 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
SRSF4-208ENST00000634348 AHNAK2Q8IVF2 5795 aa1.52□□□□□ -2.17
SRSF4-208ENST00000634348 KRTAP5-1Q6L8H4 278 aa1.51□□□□□ -2.17
SRSF4-208ENST00000634348 AHNAKQ09666 5890 aaKnown RBP1.46□□□□□ -2.18
SRSF4-208ENST00000634348 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
SRSF4-208ENST00000634348 KRTAP5-11Q6L8G4 156 aa1.35□□□□□ -2.19
SRSF4-208ENST00000634348 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
SRSF4-208ENST00000634348 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.19□□□□□ -2.22
SRSF4-208ENST00000634348 KRTAP5-7Q6L8G8 165 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms