RNA–Protein interactions for RNA: ENST00000629089.1

SPTAN1-217, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-217ENST00000629089 KTN1-AS1Q86SY8 53 aa6.39□□□□□ -1.39
SPTAN1-217ENST00000629089 LCE1AQ5T7P2 110 aa6.38□□□□□ -1.39
SPTAN1-217ENST00000629089 PRAC1Q96KF2 57 aa6.38□□□□□ -1.39
SPTAN1-217ENST00000629089 MDN1Q9NU22 5596 aa6.35□□□□□ -1.39
SPTAN1-217ENST00000629089 KRTAP19-3Q7Z4W3 81 aa6.32□□□□□ -1.4
SPTAN1-217ENST00000629089 MT1LQ93083 61 aa6.3□□□□□ -1.4
SPTAN1-217ENST00000629089 KRTAP15-1Q3LI76 137 aa6.26□□□□□ -1.41
SPTAN1-217ENST00000629089 MT1GP13640 62 aa6.24□□□□□ -1.41
SPTAN1-217ENST00000629089 LCE5AQ5TCM9 118 aa6.24□□□□□ -1.41
SPTAN1-217ENST00000629089 NEBP20929 6669 aa6.23□□□□□ -1.41
SPTAN1-217ENST00000629089 SPRR2DP22532 72 aa6.2□□□□□ -1.42
SPTAN1-217ENST00000629089 MT1MQ8N339 61 aa6.14□□□□□ -1.43
SPTAN1-217ENST00000629089 KRTAP19-4Q3LI73 84 aa6.1□□□□□ -1.43
SPTAN1-217ENST00000629089 KRTAP4-7Q9BYR0 210 aa6.05□□□□□ -1.44
SPTAN1-217ENST00000629089 LCE3CQ5T5A8 94 aa6.02□□□□□ -1.45
SPTAN1-217ENST00000629089 KRTAP4-3Q9BYR4 195 aa5.99□□□□□ -1.45
SPTAN1-217ENST00000629089 KRTAP20-1Q3LI63 56 aa5.98□□□□□ -1.45
SPTAN1-217ENST00000629089 LCE3BQ5TA77 95 aa5.98□□□□□ -1.45
SPTAN1-217ENST00000629089 KRTAP2-3P0C7H8 128 aa5.97□□□□□ -1.45
SPTAN1-217ENST00000629089 KRTAP2-4Q9BYR9 128 aa5.97□□□□□ -1.45
SPTAN1-217ENST00000629089 DSTQ03001 7570 aaKnown RBP5.91□□□□□ -1.46
SPTAN1-217ENST00000629089 KRTAP2-2Q9BYT5 123 aa5.83□□□□□ -1.48
SPTAN1-217ENST00000629089 KRTAP2-1Q9BYU5 128 aa5.83□□□□□ -1.48
SPTAN1-217ENST00000629089 LOC100996750A0A140TA64 210 aa5.7□□□□□ -1.5
SPTAN1-217ENST00000629089 KRTAP9-6A8MVA2 160 aa5.65□□□□□ -1.5
SPTAN1-217ENST00000629089 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
SPTAN1-217ENST00000629089 KRTAP5-5Q701N2 237 aaPredicted RBP5.55□□□□□ -1.52
SPTAN1-217ENST00000629089 LCE4AQ5TA78 99 aa5.48□□□□□ -1.53
SPTAN1-217ENST00000629089 KRTAP5-4Q6L8H1 288 aa5.48□□□□□ -1.53
SPTAN1-217ENST00000629089 KRTAP4-9Q9BYQ8 210 aa5.41□□□□□ -1.54
SPTAN1-217ENST00000629089 MT4P47944 62 aa5.38□□□□□ -1.55
SPTAN1-217ENST00000629089 MT1AP04731 61 aa5.37□□□□□ -1.55
SPTAN1-217ENST00000629089 LCE1DQ5T752 114 aa5.34□□□□□ -1.55
SPTAN1-217ENST00000629089 KRTAP6-1Q3LI64 71 aa5.31□□□□□ -1.56
SPTAN1-217ENST00000629089 LUZP6Q538Z0 58 aa5.31□□□□□ -1.56
SPTAN1-217ENST00000629089 KRTAP12-4P60329 112 aa5.29□□□□□ -1.56
SPTAN1-217ENST00000629089 KRTAP4-6Q9BYQ5 205 aa5.27□□□□□ -1.57
SPTAN1-217ENST00000629089 SYNE1Q8NF91 8797 aaKnown RBP5.25□□□□□ -1.57
SPTAN1-217ENST00000629089 KRTAP20-2Q3LI61 65 aa5.15□□□□□ -1.58
SPTAN1-217ENST00000629089 HMCN1Q96RW7 5635 aa5.15□□□□□ -1.59
SPTAN1-217ENST00000629089 KRTAP9-4Q9BYQ2 154 aa5.13□□□□□ -1.59
SPTAN1-217ENST00000629089 NDUFAF8A1L188 74 aa5.01□□□□□ -1.61
SPTAN1-217ENST00000629089 KRTAP6-2Q3LI66 62 aa4.97□□□□□ -1.61
SPTAN1-217ENST00000629089 KRTAP5-3Q6L8H2 238 aa4.96□□□□□ -1.62
SPTAN1-217ENST00000629089 H3BS24 57 aa4.91□□□□□ -1.62
SPTAN1-217ENST00000629089 MT3P25713 68 aa4.9□□□□□ -1.63
SPTAN1-217ENST00000629089 KRTAP5-2Q701N4 177 aa4.9□□□□□ -1.63
SPTAN1-217ENST00000629089 AHNAK2Q8IVF2 5795 aa4.71□□□□□ -1.66
SPTAN1-217ENST00000629089 GPR98Q8WXG9 6306 aa4.69□□□□□ -1.66
SPTAN1-217ENST00000629089 KRTAP5-10Q6L8G5 202 aa4.62□□□□□ -1.67
SPTAN1-217ENST00000629089 KRTAP4-11Q9BYQ6 195 aa4.56□□□□□ -1.68
SPTAN1-217ENST00000629089 OBSCNQ5VST9 7968 aa4.53□□□□□ -1.68
SPTAN1-217ENST00000629089 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
SPTAN1-217ENST00000629089 LCE3DQ9BYE3 92 aa4.47□□□□□ -1.69
SPTAN1-217ENST00000629089 KRTAP5-8O75690 187 aa4.38□□□□□ -1.71
SPTAN1-217ENST00000629089 KRTAP5-7Q6L8G8 165 aa4.36□□□□□ -1.71
SPTAN1-217ENST00000629089 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
SPTAN1-217ENST00000629089 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
SPTAN1-217ENST00000629089 KRTAP5-1Q6L8H4 278 aa4.29□□□□□ -1.72
SPTAN1-217ENST00000629089 INE1O15225 51 aa4.16□□□□□ -1.74
SPTAN1-217ENST00000629089 LCE1BQ5T7P3 118 aa4.08□□□□□ -1.76
SPTAN1-217ENST00000629089 MUC5ACP98088 5654 aa4.07□□□□□ -1.76
SPTAN1-217ENST00000629089 KRTAP9-9Q9BYP9 154 aa4.07□□□□□ -1.76
SPTAN1-217ENST00000629089 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
SPTAN1-217ENST00000629089 LCE1CQ5T751 118 aa4.02□□□□□ -1.77
SPTAN1-217ENST00000629089 MUC5BQ9HC84 5762 aaPredicted RBP3.79□□□□□ -1.8
SPTAN1-217ENST00000629089 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
SPTAN1-217ENST00000629089 AHNAKQ09666 5890 aaKnown RBP3.71□□□□□ -1.82
SPTAN1-217ENST00000629089 PRM1P04553 51 aa3.59□□□□□ -1.84
SPTAN1-217ENST00000629089 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
SPTAN1-217ENST00000629089 KRTAP21-2Q3LI59 83 aa3.48□□□□□ -1.85
SPTAN1-217ENST00000629089 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
SPTAN1-217ENST00000629089 LCE1FQ5T754 118 aa3.34□□□□□ -1.88
SPTAN1-217ENST00000629089 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
SPTAN1-217ENST00000629089 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
SPTAN1-217ENST00000629089 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
SPTAN1-217ENST00000629089 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
SPTAN1-217ENST00000629089 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms