RNA–Protein interactions for RNA: ENST00000628375.2

CHD2-215, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 3,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-215ENST00000628375 SYNE1Q8NF91 8797 aaKnown RBP2.45□□□□□ -2.02
CHD2-215ENST00000628375 LCE3AQ5TA76 89 aa2.44□□□□□ -2.02
CHD2-215ENST00000628375 KRTAP8-1Q8IUC2 63 aa2.44□□□□□ -2.02
CHD2-215ENST00000628375 LOC100996750A0A140TA64 210 aa2.35□□□□□ -2.03
CHD2-215ENST00000628375 KRTAP10-12P60413 245 aa2.35□□□□□ -2.03
CHD2-215ENST00000628375 KRTAP4-6Q9BYQ5 205 aa2.35□□□□□ -2.03
CHD2-215ENST00000628375 SPRR2EP22531 72 aa2.35□□□□□ -2.03
CHD2-215ENST00000628375 SPRR2BP35325 72 aa2.35□□□□□ -2.03
CHD2-215ENST00000628375 SPRR2AP35326 72 aa2.35□□□□□ -2.03
CHD2-215ENST00000628375 KRTAP12-3P60328 96 aa2.31□□□□□ -2.04
CHD2-215ENST00000628375 KRTAP19-5Q3LI72 72 aa2.3□□□□□ -2.04
CHD2-215ENST00000628375 KRTAP4-7Q9BYR0 210 aa2.3□□□□□ -2.04
CHD2-215ENST00000628375 KRTAP4-3Q9BYR4 195 aa2.27□□□□□ -2.05
CHD2-215ENST00000628375 KRTAP6-3Q3LI67 103 aa2.27□□□□□ -2.05
CHD2-215ENST00000628375 NEBP20929 6669 aa2.25□□□□□ -2.05
CHD2-215ENST00000628375 SPRR2DP22532 72 aa2.24□□□□□ -2.05
CHD2-215ENST00000628375 LCE5AQ5TCM9 118 aa2.24□□□□□ -2.05
CHD2-215ENST00000628375 LCE1AQ5T7P2 110 aa2.22□□□□□ -2.05
CHD2-215ENST00000628375 KRTAP19-7Q3SYF9 63 aa2.21□□□□□ -2.06
CHD2-215ENST00000628375 LCE3CQ5T5A8 94 aa2.21□□□□□ -2.06
CHD2-215ENST00000628375 KRTAP2-2Q9BYT5 123 aa2.19□□□□□ -2.06
CHD2-215ENST00000628375 KRTAP2-3P0C7H8 128 aa2.19□□□□□ -2.06
CHD2-215ENST00000628375 KRTAP2-4Q9BYR9 128 aa2.19□□□□□ -2.06
CHD2-215ENST00000628375 KRTAP2-1Q9BYU5 128 aa2.19□□□□□ -2.06
CHD2-215ENST00000628375 KRTAP4-9Q9BYQ8 210 aa2.18□□□□□ -2.06
CHD2-215ENST00000628375 MT1EP04732 61 aa2.17□□□□□ -2.06
CHD2-215ENST00000628375 KRTAP9-4Q9BYQ2 154 aa2.17□□□□□ -2.06
CHD2-215ENST00000628375 KRTAP5-9P26371 169 aa2.16□□□□□ -2.06
CHD2-215ENST00000628375 KRTAP20-1Q3LI63 56 aa2.16□□□□□ -2.06
CHD2-215ENST00000628375 KRTAP9-6A8MVA2 160 aa2.15□□□□□ -2.06
CHD2-215ENST00000628375 LCE3BQ5TA77 95 aa2.14□□□□□ -2.07
CHD2-215ENST00000628375 KRTAP19-3Q7Z4W3 81 aa2.13□□□□□ -2.07
CHD2-215ENST00000628375 MT1GP13640 62 aa2.13□□□□□ -2.07
CHD2-215ENST00000628375 MT4P47944 62 aa2.12□□□□□ -2.07
CHD2-215ENST00000628375 MT3P25713 68 aa2.11□□□□□ -2.07
CHD2-215ENST00000628375 MT1LQ93083 61 aa2.11□□□□□ -2.07
CHD2-215ENST00000628375 MT1MQ8N339 61 aa2.08□□□□□ -2.08
CHD2-215ENST00000628375 KRTAP5-3Q6L8H2 238 aa2.07□□□□□ -2.08
CHD2-215ENST00000628375 KRTAP9-9Q9BYP9 154 aa2.03□□□□□ -2.08
CHD2-215ENST00000628375 HMCN1Q96RW7 5635 aa2.01□□□□□ -2.09
CHD2-215ENST00000628375 LCE4AQ5TA78 99 aa1.98□□□□□ -2.09
CHD2-215ENST00000628375 LCE1FQ5T754 118 aa1.96□□□□□ -2.1
CHD2-215ENST00000628375 LCE1DQ5T752 114 aa1.95□□□□□ -2.1
CHD2-215ENST00000628375 KRTAP12-4P60329 112 aa1.95□□□□□ -2.1
CHD2-215ENST00000628375 LCE1EQ5T753 118 aa1.89□□□□□ -2.11
CHD2-215ENST00000628375 KRTAP6-1Q3LI64 71 aa1.87□□□□□ -2.11
CHD2-215ENST00000628375 GPR98Q8WXG9 6306 aa1.86□□□□□ -2.11
CHD2-215ENST00000628375 KRTAP4-12Q9BQ66 201 aa1.84□□□□□ -2.11
CHD2-215ENST00000628375 MT1AP04731 61 aa1.83□□□□□ -2.12
CHD2-215ENST00000628375 KRTAP5-5Q701N2 237 aaPredicted RBP1.83□□□□□ -2.12
CHD2-215ENST00000628375 KRTAP4-2Q9BYR5 136 aa1.82□□□□□ -2.12
CHD2-215ENST00000628375 KRTAP6-2Q3LI66 62 aa1.79□□□□□ -2.12
CHD2-215ENST00000628375 KRTAP20-2Q3LI61 65 aa1.76□□□□□ -2.13
CHD2-215ENST00000628375 PRM1P04553 51 aa1.75□□□□□ -2.13
CHD2-215ENST00000628375 MUC5ACP98088 5654 aa1.75□□□□□ -2.13
CHD2-215ENST00000628375 KRTAP5-4Q6L8H1 288 aa1.74□□□□□ -2.13
CHD2-215ENST00000628375 AHNAK2Q8IVF2 5795 aa1.73□□□□□ -2.13
CHD2-215ENST00000628375 LCE3EQ5T5B0 92 aa1.73□□□□□ -2.13
CHD2-215ENST00000628375 LCE3DQ9BYE3 92 aa1.72□□□□□ -2.13
CHD2-215ENST00000628375 MUC5BQ9HC84 5762 aaPredicted RBP1.69□□□□□ -2.14
CHD2-215ENST00000628375 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
CHD2-215ENST00000628375 KRTAP4-11Q9BYQ6 195 aa1.64□□□□□ -2.15
CHD2-215ENST00000628375 LCE1BQ5T7P3 118 aa1.63□□□□□ -2.15
CHD2-215ENST00000628375 KRTAP5-10Q6L8G5 202 aa1.59□□□□□ -2.16
CHD2-215ENST00000628375 KRTAP5-2Q701N4 177 aa1.59□□□□□ -2.16
CHD2-215ENST00000628375 KRTAP5-8O75690 187 aa1.56□□□□□ -2.16
CHD2-215ENST00000628375 KRTAP5-1Q6L8H4 278 aa1.43□□□□□ -2.18
CHD2-215ENST00000628375 KRTAP5-7Q6L8G8 165 aa1.42□□□□□ -2.18
CHD2-215ENST00000628375 AHNAKQ09666 5890 aaKnown RBP1.41□□□□□ -2.18
CHD2-215ENST00000628375 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.35□□□□□ -2.19
CHD2-215ENST00000628375 KRTAP4-4Q9BYR3 166 aa1.35□□□□□ -2.19
CHD2-215ENST00000628375 LCE1CQ5T751 118 aa1.3□□□□□ -2.2
CHD2-215ENST00000628375 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
CHD2-215ENST00000628375 KRTAP21-2Q3LI59 83 aa1.15□□□□□ -2.23
CHD2-215ENST00000628375 KRTAP5-11Q6L8G4 156 aa1.15□□□□□ -2.23
CHD2-215ENST00000628375 PHGR1C9JFL3 82 aa1.07□□□□□ -2.24
CHD2-215ENST00000628375 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 101 ms