RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 KRTAP10-7P60409 375 aaPredicted RBP2.77□□□□□ -1.97
CTNNA1-244ENST00000627109 LCE5AQ5TCM9 118 aa2.76□□□□□ -1.97
CTNNA1-244ENST00000627109 MACF1Q9UPN3 7388 aaKnown RBP2.76□□□□□ -1.97
CTNNA1-244ENST00000627109 KRTAP4-12Q9BQ66 201 aa2.74□□□□□ -1.97
CTNNA1-244ENST00000627109 KRTAP19-6Q3LI70 58 aa2.73□□□□□ -1.97
CTNNA1-244ENST00000627109 KRTAP4-8Q9BYQ9 185 aa2.73□□□□□ -1.97
CTNNA1-244ENST00000627109 KMT2DO14686 5537 aa2.69□□□□□ -1.98
CTNNA1-244ENST00000627109 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
CTNNA1-244ENST00000627109 KRTAP19-5Q3LI72 72 aa2.66□□□□□ -1.98
CTNNA1-244ENST00000627109 KRTAP4-8A0A0G2JLE6 195 aa2.63□□□□□ -1.99
CTNNA1-244ENST00000627109 SPRR2FQ96RM1 72 aa2.6□□□□□ -1.99
CTNNA1-244ENST00000627109 KRTAP19-7Q3SYF9 63 aa2.6□□□□□ -1.99
CTNNA1-244ENST00000627109 LCE3EQ5T5B0 92 aa2.59□□□□□ -1.99
CTNNA1-244ENST00000627109 LCE1EQ5T753 118 aa2.57□□□□□ -2
CTNNA1-244ENST00000627109 MUC12Q9UKN1 5478 aa2.55□□□□□ -2
CTNNA1-244ENST00000627109 MT3P25713 68 aa2.55□□□□□ -2
CTNNA1-244ENST00000627109 KRTAP4-7Q9BYR0 210 aa2.53□□□□□ -2
CTNNA1-244ENST00000627109 KRTAP9-6A8MVA2 160 aa2.52□□□□□ -2.01
CTNNA1-244ENST00000627109 LCE1DQ5T752 114 aa2.52□□□□□ -2.01
CTNNA1-244ENST00000627109 DSTQ03001 7570 aaKnown RBP2.52□□□□□ -2.01
CTNNA1-244ENST00000627109 MT1EP04732 61 aa2.51□□□□□ -2.01
CTNNA1-244ENST00000627109 MT1LQ93083 61 aa2.5□□□□□ -2.01
CTNNA1-244ENST00000627109 MDN1Q9NU22 5596 aa2.5□□□□□ -2.01
CTNNA1-244ENST00000627109 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
CTNNA1-244ENST00000627109 KRTAP6-3Q3LI67 103 aa2.49□□□□□ -2.01
CTNNA1-244ENST00000627109 KRTAP2-3P0C7H8 128 aa2.49□□□□□ -2.01
CTNNA1-244ENST00000627109 KRTAP2-4Q9BYR9 128 aa2.49□□□□□ -2.01
CTNNA1-244ENST00000627109 KRTAP2-1Q9BYU5 128 aa2.49□□□□□ -2.01
CTNNA1-244ENST00000627109 SPRR2EP22531 72 aa2.49□□□□□ -2.01
CTNNA1-244ENST00000627109 SPRR2BP35325 72 aa2.49□□□□□ -2.01
CTNNA1-244ENST00000627109 SPRR2AP35326 72 aa2.49□□□□□ -2.01
CTNNA1-244ENST00000627109 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
CTNNA1-244ENST00000627109 LCE1AQ5T7P2 110 aa2.46□□□□□ -2.02
CTNNA1-244ENST00000627109 KRTAP2-2Q9BYT5 123 aa2.45□□□□□ -2.02
CTNNA1-244ENST00000627109 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
CTNNA1-244ENST00000627109 NEBP20929 6669 aa2.42□□□□□ -2.02
CTNNA1-244ENST00000627109 SYNE1Q8NF91 8797 aaKnown RBP2.39□□□□□ -2.03
CTNNA1-244ENST00000627109 SPRR2DP22532 72 aa2.39□□□□□ -2.03
CTNNA1-244ENST00000627109 KRTAP5-9P26371 169 aa2.39□□□□□ -2.03
CTNNA1-244ENST00000627109 KRTAP4-3Q9BYR4 195 aa2.36□□□□□ -2.03
CTNNA1-244ENST00000627109 MT1GP13640 62 aa2.36□□□□□ -2.03
CTNNA1-244ENST00000627109 KRTAP4-11Q9BYQ6 195 aa2.35□□□□□ -2.03
CTNNA1-244ENST00000627109 KRTAP19-3Q7Z4W3 81 aa2.34□□□□□ -2.03
CTNNA1-244ENST00000627109 MT1MQ8N339 61 aa2.34□□□□□ -2.04
CTNNA1-244ENST00000627109 KRTAP4-9Q9BYQ8 210 aa2.33□□□□□ -2.04
CTNNA1-244ENST00000627109 KRTAP20-1Q3LI63 56 aa2.31□□□□□ -2.04
CTNNA1-244ENST00000627109 KRTAP4-2Q9BYR5 136 aa2.23□□□□□ -2.05
CTNNA1-244ENST00000627109 KRTAP12-4P60329 112 aa2.22□□□□□ -2.05
CTNNA1-244ENST00000627109 KRTAP5-5Q701N2 237 aaPredicted RBP2.17□□□□□ -2.06
CTNNA1-244ENST00000627109 GPR98Q8WXG9 6306 aa2.16□□□□□ -2.06
CTNNA1-244ENST00000627109 MT1AP04731 61 aa2.15□□□□□ -2.06
CTNNA1-244ENST00000627109 MT4P47944 62 aa2.15□□□□□ -2.06
CTNNA1-244ENST00000627109 KRTAP6-1Q3LI64 71 aa2.09□□□□□ -2.07
CTNNA1-244ENST00000627109 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
CTNNA1-244ENST00000627109 PRM1P04553 51 aa1.95□□□□□ -2.1
CTNNA1-244ENST00000627109 KRTAP5-4Q6L8H1 288 aa1.93□□□□□ -2.1
CTNNA1-244ENST00000627109 KRTAP5-3Q6L8H2 238 aa1.92□□□□□ -2.1
CTNNA1-244ENST00000627109 KRTAP20-2Q3LI61 65 aa1.9□□□□□ -2.11
CTNNA1-244ENST00000627109 KRTAP6-2Q3LI66 62 aa1.89□□□□□ -2.11
CTNNA1-244ENST00000627109 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
CTNNA1-244ENST00000627109 AHNAK2Q8IVF2 5795 aa1.79□□□□□ -2.12
CTNNA1-244ENST00000627109 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
CTNNA1-244ENST00000627109 MUC5ACP98088 5654 aa1.67□□□□□ -2.14
CTNNA1-244ENST00000627109 LCE1BQ5T7P3 118 aa1.67□□□□□ -2.14
CTNNA1-244ENST00000627109 LCE1CQ5T751 118 aa1.63□□□□□ -2.15
CTNNA1-244ENST00000627109 KRTAP5-11Q6L8G4 156 aa1.62□□□□□ -2.15
CTNNA1-244ENST00000627109 KRTAP5-8O75690 187 aa1.61□□□□□ -2.15
CTNNA1-244ENST00000627109 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
CTNNA1-244ENST00000627109 KRTAP5-1Q6L8H4 278 aa1.56□□□□□ -2.16
CTNNA1-244ENST00000627109 MUC5BQ9HC84 5762 aaPredicted RBP1.55□□□□□ -2.16
CTNNA1-244ENST00000627109 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.5□□□□□ -2.17
CTNNA1-244ENST00000627109 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
CTNNA1-244ENST00000627109 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
CTNNA1-244ENST00000627109 KRTAP4-4Q9BYR3 166 aa1.35□□□□□ -2.19
CTNNA1-244ENST00000627109 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
CTNNA1-244ENST00000627109 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
CTNNA1-244ENST00000627109 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 9.8 ms