RNA–Protein interactions for RNA: ENST00000623385.3

TRIM39-RPP21-201, Transcript of TRIM39-RPP21 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM39-RPP21, Length 1,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-RPP21-201ENST00000623385 KRTAP4-12Q9BQ66 201 aa4.93□□□□□ -1.62
TRIM39-RPP21-201ENST00000623385 MUC12Q9UKN1 5478 aa4.93□□□□□ -1.62
TRIM39-RPP21-201ENST00000623385 KRTAP19-5Q3LI72 72 aa4.89□□□□□ -1.63
TRIM39-RPP21-201ENST00000623385 MDN1Q9NU22 5596 aa4.86□□□□□ -1.63
TRIM39-RPP21-201ENST00000623385 MT1EP04732 61 aa4.84□□□□□ -1.63
TRIM39-RPP21-201ENST00000623385 NEBP20929 6669 aa4.83□□□□□ -1.64
TRIM39-RPP21-201ENST00000623385 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
TRIM39-RPP21-201ENST00000623385 LCE3BQ5TA77 95 aa4.8□□□□□ -1.64
TRIM39-RPP21-201ENST00000623385 KRTAP20-1Q3LI63 56 aa4.8□□□□□ -1.64
TRIM39-RPP21-201ENST00000623385 LUZP6Q538Z0 58 aa4.8□□□□□ -1.64
TRIM39-RPP21-201ENST00000623385 SPRR2EP22531 72 aa4.79□□□□□ -1.64
TRIM39-RPP21-201ENST00000623385 SPRR2BP35325 72 aa4.79□□□□□ -1.64
TRIM39-RPP21-201ENST00000623385 SPRR2AP35326 72 aa4.79□□□□□ -1.64
TRIM39-RPP21-201ENST00000623385 SPRR5A0A1B0GTR4 108 aa4.77□□□□□ -1.65
TRIM39-RPP21-201ENST00000623385 KRTAP12-3P60328 96 aa4.76□□□□□ -1.65
TRIM39-RPP21-201ENST00000623385 KRTAP9-9Q9BYP9 154 aa4.73□□□□□ -1.65
TRIM39-RPP21-201ENST00000623385 KRTAP9-4Q9BYQ2 154 aa4.73□□□□□ -1.65
TRIM39-RPP21-201ENST00000623385 KRTAP19-3Q7Z4W3 81 aa4.7□□□□□ -1.66
TRIM39-RPP21-201ENST00000623385 MT1LQ93083 61 aa4.7□□□□□ -1.66
TRIM39-RPP21-201ENST00000623385 LCE5AQ5TCM9 118 aa4.67□□□□□ -1.66
TRIM39-RPP21-201ENST00000623385 KRTAP19-4Q3LI73 84 aa4.65□□□□□ -1.66
TRIM39-RPP21-201ENST00000623385 KRTAP2-3P0C7H8 128 aa4.64□□□□□ -1.67
TRIM39-RPP21-201ENST00000623385 KRTAP2-4Q9BYR9 128 aa4.64□□□□□ -1.67
TRIM39-RPP21-201ENST00000623385 LCE4AQ5TA78 99 aa4.63□□□□□ -1.67
TRIM39-RPP21-201ENST00000623385 MT1GP13640 62 aa4.61□□□□□ -1.67
TRIM39-RPP21-201ENST00000623385 SPRR2DP22532 72 aa4.61□□□□□ -1.67
TRIM39-RPP21-201ENST00000623385 MT1MQ8N339 61 aa4.57□□□□□ -1.68
TRIM39-RPP21-201ENST00000623385 KRTAP4-7Q9BYR0 210 aa4.54□□□□□ -1.68
TRIM39-RPP21-201ENST00000623385 KRTAP4-3Q9BYR4 195 aa4.51□□□□□ -1.69
TRIM39-RPP21-201ENST00000623385 LCE1DQ5T752 114 aa4.51□□□□□ -1.69
TRIM39-RPP21-201ENST00000623385 KRTAP2-2Q9BYT5 123 aa4.48□□□□□ -1.69
TRIM39-RPP21-201ENST00000623385 KRTAP2-1Q9BYU5 128 aa4.48□□□□□ -1.69
TRIM39-RPP21-201ENST00000623385 LCE3CQ5T5A8 94 aa4.43□□□□□ -1.7
TRIM39-RPP21-201ENST00000623385 DSTQ03001 7570 aaKnown RBP4.43□□□□□ -1.7
TRIM39-RPP21-201ENST00000623385 KRTAP4-9Q9BYQ8 210 aa4.36□□□□□ -1.71
TRIM39-RPP21-201ENST00000623385 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
TRIM39-RPP21-201ENST00000623385 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
TRIM39-RPP21-201ENST00000623385 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
TRIM39-RPP21-201ENST00000623385 KRTAP5-5Q701N2 237 aaPredicted RBP4.19□□□□□ -1.74
TRIM39-RPP21-201ENST00000623385 INE1O15225 51 aa4.15□□□□□ -1.75
TRIM39-RPP21-201ENST00000623385 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
TRIM39-RPP21-201ENST00000623385 MT4P47944 62 aa4.03□□□□□ -1.76
TRIM39-RPP21-201ENST00000623385 MT1AP04731 61 aa3.98□□□□□ -1.77
TRIM39-RPP21-201ENST00000623385 GPR98Q8WXG9 6306 aa3.98□□□□□ -1.77
TRIM39-RPP21-201ENST00000623385 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
TRIM39-RPP21-201ENST00000623385 HMCN1Q96RW7 5635 aa3.95□□□□□ -1.78
TRIM39-RPP21-201ENST00000623385 SYNE1Q8NF91 8797 aaKnown RBP3.93□□□□□ -1.78
TRIM39-RPP21-201ENST00000623385 KRTAP12-4P60329 112 aa3.9□□□□□ -1.79
TRIM39-RPP21-201ENST00000623385 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
TRIM39-RPP21-201ENST00000623385 KRTAP5-3Q6L8H2 238 aa3.76□□□□□ -1.81
TRIM39-RPP21-201ENST00000623385 KRTAP5-10Q6L8G5 202 aa3.75□□□□□ -1.81
TRIM39-RPP21-201ENST00000623385 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
TRIM39-RPP21-201ENST00000623385 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
TRIM39-RPP21-201ENST00000623385 AHNAK2Q8IVF2 5795 aa3.66□□□□□ -1.82
TRIM39-RPP21-201ENST00000623385 KRTAP5-7Q6L8G8 165 aa3.63□□□□□ -1.83
TRIM39-RPP21-201ENST00000623385 MT3P25713 68 aa3.6□□□□□ -1.83
TRIM39-RPP21-201ENST00000623385 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
TRIM39-RPP21-201ENST00000623385 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
TRIM39-RPP21-201ENST00000623385 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
TRIM39-RPP21-201ENST00000623385 KRTAP5-1Q6L8H4 278 aa3.25□□□□□ -1.89
TRIM39-RPP21-201ENST00000623385 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
TRIM39-RPP21-201ENST00000623385 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
TRIM39-RPP21-201ENST00000623385 MUC5ACP98088 5654 aa3.09□□□□□ -1.91
TRIM39-RPP21-201ENST00000623385 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
TRIM39-RPP21-201ENST00000623385 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
TRIM39-RPP21-201ENST00000623385 PRM1P04553 51 aa3.01□□□□□ -1.93
TRIM39-RPP21-201ENST00000623385 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
TRIM39-RPP21-201ENST00000623385 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
TRIM39-RPP21-201ENST00000623385 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
TRIM39-RPP21-201ENST00000623385 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
TRIM39-RPP21-201ENST00000623385 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.96
TRIM39-RPP21-201ENST00000623385 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
TRIM39-RPP21-201ENST00000623385 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
TRIM39-RPP21-201ENST00000623385 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
TRIM39-RPP21-201ENST00000623385 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
TRIM39-RPP21-201ENST00000623385 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
TRIM39-RPP21-201ENST00000623385 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 180 ms