RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 KRTAP4-7Q9BYR0 210 aa7.42□□□□□ -1.22
SPAST-204ENST00000621856 MUC12Q9UKN1 5478 aa7.38□□□□□ -1.23
SPAST-204ENST00000621856 MT1GP13640 62 aa7.37□□□□□ -1.23
SPAST-204ENST00000621856 KRTAP5-9P26371 169 aa7.37□□□□□ -1.23
SPAST-204ENST00000621856 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.36□□□□□ -1.23
SPAST-204ENST00000621856 LOC100996750A0A140TA64 210 aa7.35□□□□□ -1.23
SPAST-204ENST00000621856 KRTAP4-6Q9BYQ5 205 aa7.35□□□□□ -1.23
SPAST-204ENST00000621856 SYNE2Q8WXH0 6885 aaKnown RBP7.31□□□□□ -1.24
SPAST-204ENST00000621856 MT1MQ8N339 61 aa7.3□□□□□ -1.24
SPAST-204ENST00000621856 LCE5AQ5TCM9 118 aa7.27□□□□□ -1.25
SPAST-204ENST00000621856 KRTAP6-3Q3LI67 103 aa7.22□□□□□ -1.25
SPAST-204ENST00000621856 KRTAP4-3Q9BYR4 195 aa7.2□□□□□ -1.26
SPAST-204ENST00000621856 LCE1AQ5T7P2 110 aa7.18□□□□□ -1.26
SPAST-204ENST00000621856 KRTAP9-6A8MVA2 160 aa7.17□□□□□ -1.26
SPAST-204ENST00000621856 SPRR2EP22531 72 aa7.15□□□□□ -1.26
SPAST-204ENST00000621856 SPRR2BP35325 72 aa7.15□□□□□ -1.26
SPAST-204ENST00000621856 SPRR2AP35326 72 aa7.15□□□□□ -1.26
SPAST-204ENST00000621856 MDN1Q9NU22 5596 aa7.03□□□□□ -1.28
SPAST-204ENST00000621856 KRTAP9-7A8MTY7 169 aa6.93□□□□□ -1.3
SPAST-204ENST00000621856 SPRR2DP22532 72 aa6.89□□□□□ -1.31
SPAST-204ENST00000621856 DSTQ03001 7570 aaKnown RBP6.77□□□□□ -1.33
SPAST-204ENST00000621856 H3BS24 57 aa6.7□□□□□ -1.34
SPAST-204ENST00000621856 KRTAP2-3P0C7H8 128 aa6.65□□□□□ -1.34
SPAST-204ENST00000621856 KRTAP2-4Q9BYR9 128 aa6.65□□□□□ -1.34
SPAST-204ENST00000621856 KRTAP2-1Q9BYU5 128 aa6.65□□□□□ -1.34
SPAST-204ENST00000621856 NEBP20929 6669 aa6.63□□□□□ -1.35
SPAST-204ENST00000621856 LCE3BQ5TA77 95 aa6.59□□□□□ -1.35
SPAST-204ENST00000621856 A0A0A0MQY5 61 aa6.56□□□□□ -1.36
SPAST-204ENST00000621856 KRTAP5-5Q701N2 237 aaPredicted RBP6.53□□□□□ -1.36
SPAST-204ENST00000621856 MT1AP04731 61 aa6.47□□□□□ -1.37
SPAST-204ENST00000621856 KRTAP6-1Q3LI64 71 aa6.43□□□□□ -1.38
SPAST-204ENST00000621856 KRTAP5-4Q6L8H1 288 aa6.18□□□□□ -1.42
SPAST-204ENST00000621856 KRTAP20-1Q3LI63 56 aa6.17□□□□□ -1.42
SPAST-204ENST00000621856 KRTAP2-2Q9BYT5 123 aa6.17□□□□□ -1.42
SPAST-204ENST00000621856 SYNE1Q8NF91 8797 aaKnown RBP6.15□□□□□ -1.42
SPAST-204ENST00000621856 KRTAP9-4Q9BYQ2 154 aa6.13□□□□□ -1.43
SPAST-204ENST00000621856 INE1O15225 51 aa6.11□□□□□ -1.43
SPAST-204ENST00000621856 KRTAP9-9Q9BYP9 154 aa6.11□□□□□ -1.43
SPAST-204ENST00000621856 KRTAP4-12Q9BQ66 201 aa6.09□□□□□ -1.43
SPAST-204ENST00000621856 KRTAP12-4P60329 112 aa6.08□□□□□ -1.44
SPAST-204ENST00000621856 LCE4AQ5TA78 99 aa6.08□□□□□ -1.44
SPAST-204ENST00000621856 MT4P47944 62 aa5.99□□□□□ -1.45
SPAST-204ENST00000621856 KRTAP4-9Q9BYQ8 210 aa5.96□□□□□ -1.46
SPAST-204ENST00000621856 KRTAP6-2Q3LI66 62 aa5.91□□□□□ -1.46
SPAST-204ENST00000621856 MT3P25713 68 aa5.86□□□□□ -1.47
SPAST-204ENST00000621856 LCE1DQ5T752 114 aa5.83□□□□□ -1.48
SPAST-204ENST00000621856 KRTAP20-2Q3LI61 65 aa5.81□□□□□ -1.48
SPAST-204ENST00000621856 LCE3DQ9BYE3 92 aa5.73□□□□□ -1.49
SPAST-204ENST00000621856 KRTAP4-2Q9BYR5 136 aa5.69□□□□□ -1.5
SPAST-204ENST00000621856 HMCN1Q96RW7 5635 aa5.68□□□□□ -1.5
SPAST-204ENST00000621856 KRTAP5-2Q701N4 177 aa5.63□□□□□ -1.51
SPAST-204ENST00000621856 LCE3EQ5T5B0 92 aa5.58□□□□□ -1.52
SPAST-204ENST00000621856 KRTAP5-3Q6L8H2 238 aa5.57□□□□□ -1.52
SPAST-204ENST00000621856 KRTAP4-11Q9BYQ6 195 aa5.43□□□□□ -1.54
SPAST-204ENST00000621856 OBSCNQ5VST9 7968 aa5.32□□□□□ -1.56
SPAST-204ENST00000621856 LCE1EQ5T753 118 aa5.03□□□□□ -1.6
SPAST-204ENST00000621856 AHNAK2Q8IVF2 5795 aa5.01□□□□□ -1.61
SPAST-204ENST00000621856 PRM1P04553 51 aa4.94□□□□□ -1.62
SPAST-204ENST00000621856 KRTAP5-1Q6L8H4 278 aa4.86□□□□□ -1.63
SPAST-204ENST00000621856 KRTAP5-8O75690 187 aa4.8□□□□□ -1.64
SPAST-204ENST00000621856 LCE1BQ5T7P3 118 aa4.8□□□□□ -1.64
SPAST-204ENST00000621856 KRTAP5-10Q6L8G5 202 aa4.75□□□□□ -1.65
SPAST-204ENST00000621856 MUC5ACP98088 5654 aa4.71□□□□□ -1.66
SPAST-204ENST00000621856 LCE1CQ5T751 118 aa4.69□□□□□ -1.66
SPAST-204ENST00000621856 KRTAP5-7Q6L8G8 165 aa4.65□□□□□ -1.67
SPAST-204ENST00000621856 GPR98Q8WXG9 6306 aa4.41□□□□□ -1.7
SPAST-204ENST00000621856 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.38□□□□□ -1.71
SPAST-204ENST00000621856 KRTAP21-2Q3LI59 83 aa4.18□□□□□ -1.74
SPAST-204ENST00000621856 KRTAP5-11Q6L8G4 156 aa4.13□□□□□ -1.75
SPAST-204ENST00000621856 MUC5BQ9HC84 5762 aaPredicted RBP4.08□□□□□ -1.76
SPAST-204ENST00000621856 KRTAP4-4Q9BYR3 166 aa3.78□□□□□ -1.8
SPAST-204ENST00000621856 AHNAKQ09666 5890 aaKnown RBP3.71□□□□□ -1.81
SPAST-204ENST00000621856 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
SPAST-204ENST00000621856 PHGR1C9JFL3 82 aa3.55□□□□□ -1.84
SPAST-204ENST00000621856 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
SPAST-204ENST00000621856 KRTAP21-1Q3LI58 79 aa3□□□□□ -1.93
SPAST-204ENST00000621856 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 68.1 ms