RNA–Protein interactions for RNA: ENST00000621534.4

PSMD13-215, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5 BASIC

Gene PSMD13, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-215	ENST00000621534	SPRR2B	P35325	72 aa		5.84	□□□□□ -1.48
PSMD13-215	ENST00000621534	SPRR2A	P35326	72 aa		5.84	□□□□□ -1.48
PSMD13-215	ENST00000621534	LCE3B	Q5TA77	95 aa		5.81	□□□□□ -1.48
PSMD13-215	ENST00000621534	KRTAP23-1	A1A580	65 aa		5.79	□□□□□ -1.48
PSMD13-215	ENST00000621534	KRTAP4-12	Q9BQ66	201 aa		5.77	□□□□□ -1.49
PSMD13-215	ENST00000621534	PP632	Q6XCG6	107 aa		5.76	□□□□□ -1.49
PSMD13-215	ENST00000621534	KRTAP8-1	Q8IUC2	63 aa		5.75	□□□□□ -1.49
PSMD13-215	ENST00000621534	LCE1A	Q5T7P2	110 aa		5.72	□□□□□ -1.49
PSMD13-215	ENST00000621534	KRTAP9-9	Q9BYP9	154 aa		5.7	□□□□□ -1.5
PSMD13-215	ENST00000621534	KRTAP9-4	Q9BYQ2	154 aa		5.7	□□□□□ -1.5
PSMD13-215	ENST00000621534	KRTAP2-2	Q9BYT5	123 aa		5.7	□□□□□ -1.5
PSMD13-215	ENST00000621534	KRTAP2-1	Q9BYU5	128 aa		5.7	□□□□□ -1.5
PSMD13-215	ENST00000621534	KRTAP19-5	Q3LI72	72 aa		5.66	□□□□□ -1.5
PSMD13-215	ENST00000621534	SPRR2D	P22532	72 aa		5.64	□□□□□ -1.51
PSMD13-215	ENST00000621534	KRTAP19-7	Q3SYF9	63 aa		5.63	□□□□□ -1.51
PSMD13-215	ENST00000621534	KRTAP12-3	P60328	96 aa		5.61	□□□□□ -1.51
PSMD13-215	ENST00000621534	MT1E	P04732	61 aa		5.54	□□□□□ -1.52
PSMD13-215	ENST00000621534	KRTAP4-7	Q9BYR0	210 aa		5.46	□□□□□ -1.54
PSMD13-215	ENST00000621534	KRTAP15-1	Q3LI76	137 aa		5.45	□□□□□ -1.54
PSMD13-215	ENST00000621534	GPR98	Q8WXG9	6306 aa		5.44	□□□□□ -1.54
PSMD13-215	ENST00000621534	LCE1D	Q5T752	114 aa		5.43	□□□□□ -1.54
PSMD13-215	ENST00000621534	MT1L	Q93083	61 aa		5.4	□□□□□ -1.55
PSMD13-215	ENST00000621534	DST	Q03001	7570 aa	Known RBP	5.38	□□□□□ -1.55
PSMD13-215	ENST00000621534	KRTAP19-3	Q7Z4W3	81 aa		5.33	□□□□□ -1.56
PSMD13-215	ENST00000621534	KRTAP4-9	Q9BYQ8	210 aa		5.29	□□□□□ -1.56
PSMD13-215	ENST00000621534	LCE5A	Q5TCM9	118 aa		5.26	□□□□□ -1.57
PSMD13-215	ENST00000621534	MT1G	P13640	62 aa		5.25	□□□□□ -1.57
PSMD13-215	ENST00000621534	LCE3C	Q5T5A8	94 aa		5.23	□□□□□ -1.57
PSMD13-215	ENST00000621534	MT1M	Q8N339	61 aa		5.22	□□□□□ -1.57
PSMD13-215	ENST00000621534	KRTAP4-2	Q9BYR5	136 aa		5.22	□□□□□ -1.57
PSMD13-215	ENST00000621534	KRTAP19-4	Q3LI73	84 aa		5.18	□□□□□ -1.58
PSMD13-215	ENST00000621534	KRTAP4-3	Q9BYR4	195 aa		5.15	□□□□□ -1.59
PSMD13-215	ENST00000621534	SPRR5	A0A1B0GTR4	108 aa		5.1	□□□□□ -1.59
PSMD13-215	ENST00000621534	KRTAP4-11	Q9BYQ6	195 aa		5.08	□□□□□ -1.6
PSMD13-215	ENST00000621534	LCE4A	Q5TA78	99 aa		5.07	□□□□□ -1.6
PSMD13-215	ENST00000621534	HMCN1	Q96RW7	5635 aa		5.05	□□□□□ -1.6
PSMD13-215	ENST00000621534	AHNAK2	Q8IVF2	5795 aa		5	□□□□□ -1.61
PSMD13-215	ENST00000621534	KRTAP9-6	A8MVA2	160 aa		4.99	□□□□□ -1.61
PSMD13-215	ENST00000621534	MT4	P47944	62 aa		4.97	□□□□□ -1.61
PSMD13-215	ENST00000621534	KRTAP5-10	Q6L8G5	202 aa		4.82	□□□□□ -1.64
PSMD13-215	ENST00000621534	KRTAP5-4	Q6L8H1	288 aa		4.81	□□□□□ -1.64
PSMD13-215	ENST00000621534	LUZP6	Q538Z0	58 aa		4.78	□□□□□ -1.64
PSMD13-215	ENST00000621534	KRTAP5-3	Q6L8H2	238 aa		4.78	□□□□□ -1.64
PSMD13-215	ENST00000621534	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.73	□□□□□ -1.65
PSMD13-215	ENST00000621534	KRTAP5-7	Q6L8G8	165 aa		4.65	□□□□□ -1.66
PSMD13-215	ENST00000621534	NDUFAF8	A1L188	74 aa		4.63	□□□□□ -1.67
PSMD13-215	ENST00000621534	MT1A	P04731	61 aa		4.58	□□□□□ -1.68
PSMD13-215	ENST00000621534	KRTAP20-2	Q3LI61	65 aa		4.57	□□□□□ -1.68
PSMD13-215	ENST00000621534	KRTAP6-1	Q3LI64	71 aa		4.57	□□□□□ -1.68
PSMD13-215	ENST00000621534	KRTAP12-4	P60329	112 aa		4.46	□□□□□ -1.7
PSMD13-215	ENST00000621534	SYNE1	Q8NF91	8797 aa	Known RBP	4.45	□□□□□ -1.7
PSMD13-215	ENST00000621534	KRTAP6-2	Q3LI66	62 aa		4.22	□□□□□ -1.73
PSMD13-215	ENST00000621534	AHNAK	Q09666	5890 aa	Known RBP	4.19	□□□□□ -1.74
PSMD13-215	ENST00000621534		A0A0A0MQY5	61 aa		4.17	□□□□□ -1.74
PSMD13-215	ENST00000621534	KRTAP5-2	Q701N4	177 aa		4.17	□□□□□ -1.74
PSMD13-215	ENST00000621534	MUC5AC	P98088	5654 aa		4.14	□□□□□ -1.75
PSMD13-215	ENST00000621534	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.14	□□□□□ -1.75
PSMD13-215	ENST00000621534	MT3	P25713	68 aa		4.13	□□□□□ -1.75
PSMD13-215	ENST00000621534	KRTAP5-8	O75690	187 aa		4.1	□□□□□ -1.75
PSMD13-215	ENST00000621534	OBSCN	Q5VST9	7968 aa		4.06	□□□□□ -1.76
PSMD13-215	ENST00000621534	LCE3D	Q9BYE3	92 aa		3.89	□□□□□ -1.79
PSMD13-215	ENST00000621534	KRTAP5-1	Q6L8H4	278 aa		3.8	□□□□□ -1.8
PSMD13-215	ENST00000621534	LCE3E	Q5T5B0	92 aa		3.76	□□□□□ -1.81
PSMD13-215	ENST00000621534	INE1	O15225	51 aa		3.76	□□□□□ -1.81
PSMD13-215	ENST00000621534	LCE1E	Q5T753	118 aa		3.61	□□□□□ -1.83
PSMD13-215	ENST00000621534	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.53	□□□□□ -1.84
PSMD13-215	ENST00000621534	LCE1B	Q5T7P3	118 aa		3.42	□□□□□ -1.86
PSMD13-215	ENST00000621534	KRTAP5-11	Q6L8G4	156 aa		3.42	□□□□□ -1.86
PSMD13-215	ENST00000621534	LCE1C	Q5T751	118 aa		3.38	□□□□□ -1.87
PSMD13-215	ENST00000621534	PRM1	P04553	51 aa		3.25	□□□□□ -1.89
PSMD13-215	ENST00000621534	LCE1F	Q5T754	118 aa		3.15	□□□□□ -1.91
PSMD13-215	ENST00000621534	KRTAP21-2	Q3LI59	83 aa		2.99	□□□□□ -1.93
PSMD13-215	ENST00000621534	KRTAP4-4	Q9BYR3	166 aa		2.95	□□□□□ -1.94
PSMD13-215	ENST00000621534	PHGR1	C9JFL3	82 aa		2.83	□□□□□ -1.96
PSMD13-215	ENST00000621534	MUC19	Q7Z5P9	8384 aa		2.52	□□□□□ -2.01
PSMD13-215	ENST00000621534	KRTAP21-1	Q3LI58	79 aa		2.14	□□□□□ -2.07
PSMD13-215	ENST00000621534	MUC16	Q8WXI7	14507 aa		1.77	□□□□□ -2.13

Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms