RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 MIR22HGQ0VDD5 57 aa2.21□□□□□ -2.06
VPS29-212ENST00000621131 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
VPS29-212ENST00000621131 A0A1B0GU33 70 aa2.2□□□□□ -2.06
VPS29-212ENST00000621131 KRTAP4-1Q9BYQ7 146 aa2.2□□□□□ -2.06
VPS29-212ENST00000621131 HMCN1Q96RW7 5635 aa2.2□□□□□ -2.06
VPS29-212ENST00000621131 K7ERS5 55 aa2.19□□□□□ -2.06
VPS29-212ENST00000621131 H0YAA0 97 aa2.17□□□□□ -2.06
VPS29-212ENST00000621131 SPATA8Q6RVD6 105 aa2.17□□□□□ -2.06
VPS29-212ENST00000621131 ADM2Q7Z4H4 148 aa2.16□□□□□ -2.06
VPS29-212ENST00000621131 M0QZ58 72 aa2.14□□□□□ -2.07
VPS29-212ENST00000621131 PMAIP1Q13794 54 aa2.14□□□□□ -2.07
VPS29-212ENST00000621131 M0R2T5 61 aa2.13□□□□□ -2.07
VPS29-212ENST00000621131 R4GN34 69 aa2.13□□□□□ -2.07
VPS29-212ENST00000621131 FLGP20930 4061 aaPredicted RBP2.12□□□□□ -2.07
VPS29-212ENST00000621131 P0C880 135 aa2.11□□□□□ -2.07
VPS29-212ENST00000621131 MUC12Q9UKN1 5478 aa2.11□□□□□ -2.07
VPS29-212ENST00000621131 A0A0D9SG42 100 aa2.1□□□□□ -2.07
VPS29-212ENST00000621131 KRTAP20-1Q3LI63 56 aa2.1□□□□□ -2.07
VPS29-212ENST00000621131 CRIPTQ9P021 101 aa2.1□□□□□ -2.07
VPS29-212ENST00000621131 KRTAP19-2Q3LHN2 52 aa2.09□□□□□ -2.07
VPS29-212ENST00000621131 KRTAP6-3Q3LI67 103 aa2.09□□□□□ -2.07
VPS29-212ENST00000621131 A6NN06 94 aa2.08□□□□□ -2.08
VPS29-212ENST00000621131 MDN1Q9NU22 5596 aa2.07□□□□□ -2.08
VPS29-212ENST00000621131 LINC01554Q52M75 96 aa2.07□□□□□ -2.08
VPS29-212ENST00000621131 SPINT4Q6UDR6 99 aa2.07□□□□□ -2.08
VPS29-212ENST00000621131 KTN1-AS1Q86SY8 53 aa2.07□□□□□ -2.08
VPS29-212ENST00000621131 MT1HP80294 61 aa2.06□□□□□ -2.08
VPS29-212ENST00000621131 KRTAP13-4Q3LI77 160 aa2.06□□□□□ -2.08
VPS29-212ENST00000621131 KMT2DO14686 5537 aa2.03□□□□□ -2.08
VPS29-212ENST00000621131 ROMO1P60602 79 aa2.02□□□□□ -2.09
VPS29-212ENST00000621131 KRTAP12-1P59990 96 aa2.01□□□□□ -2.09
VPS29-212ENST00000621131 PLAC4Q8WY50 150 aa2□□□□□ -2.09
VPS29-212ENST00000621131 MT2AP02795 61 aa1.98□□□□□ -2.09
VPS29-212ENST00000621131 SPRR2GQ9BYE4 73 aa1.97□□□□□ -2.09
VPS29-212ENST00000621131 MT1FP04733 61 aa1.96□□□□□ -2.1
VPS29-212ENST00000621131 KRTAP2-3P0C7H8 128 aa1.93□□□□□ -2.1
VPS29-212ENST00000621131 KRTAP25-1Q3LHN0 102 aa1.93□□□□□ -2.1
VPS29-212ENST00000621131 KRTAP2-4Q9BYR9 128 aa1.93□□□□□ -2.1
VPS29-212ENST00000621131 KRTAP19-6Q3LI70 58 aa1.92□□□□□ -2.1
VPS29-212ENST00000621131 TNP1P09430 55 aa1.91□□□□□ -2.1
VPS29-212ENST00000621131 KRTAP19-8Q3LI54 63 aa1.91□□□□□ -2.1
VPS29-212ENST00000621131 PRO2289Q9P1D8 64 aa1.9□□□□□ -2.11
VPS29-212ENST00000621131 C10orf95Q9H7T3 257 aa1.89□□□□□ -2.11
VPS29-212ENST00000621131 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
VPS29-212ENST00000621131 MT1BP07438 61 aa1.85□□□□□ -2.11
VPS29-212ENST00000621131 KRTAP2-1Q9BYU5 128 aa1.85□□□□□ -2.11
VPS29-212ENST00000621131 DSTQ03001 7570 aaKnown RBP1.81□□□□□ -2.12
VPS29-212ENST00000621131 MT1XP80297 61 aa1.8□□□□□ -2.12
VPS29-212ENST00000621131 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
VPS29-212ENST00000621131 KRTAP8-1Q8IUC2 63 aa1.72□□□□□ -2.13
VPS29-212ENST00000621131 SPRR2EP22531 72 aa1.7□□□□□ -2.14
VPS29-212ENST00000621131 SPRR2BP35325 72 aa1.7□□□□□ -2.14
VPS29-212ENST00000621131 SPRR2AP35326 72 aa1.7□□□□□ -2.14
VPS29-212ENST00000621131 LUZP6Q538Z0 58 aa1.7□□□□□ -2.14
VPS29-212ENST00000621131 KRTAP5-10Q6L8G5 202 aa1.7□□□□□ -2.14
VPS29-212ENST00000621131 KRTAP19-5Q3LI72 72 aa1.66□□□□□ -2.14
VPS29-212ENST00000621131 SPRR2DP22532 72 aa1.65□□□□□ -2.15
VPS29-212ENST00000621131 MUC5BQ9HC84 5762 aaPredicted RBP1.63□□□□□ -2.15
VPS29-212ENST00000621131 SPRR2FQ96RM1 72 aa1.63□□□□□ -2.15
VPS29-212ENST00000621131 MT1EP04732 61 aa1.59□□□□□ -2.15
VPS29-212ENST00000621131 KRTAP19-7Q3SYF9 63 aa1.59□□□□□ -2.15
VPS29-212ENST00000621131 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
VPS29-212ENST00000621131 MT1LQ93083 61 aa1.57□□□□□ -2.16
VPS29-212ENST00000621131 MT1GP13640 62 aa1.54□□□□□ -2.16
VPS29-212ENST00000621131 KRTAP19-3Q7Z4W3 81 aa1.54□□□□□ -2.16
VPS29-212ENST00000621131 MT1MQ8N339 61 aa1.5□□□□□ -2.17
VPS29-212ENST00000621131 MT4P47944 62 aa1.46□□□□□ -2.18
VPS29-212ENST00000621131 INE1O15225 51 aa1.38□□□□□ -2.19
VPS29-212ENST00000621131 MT1AP04731 61 aa1.35□□□□□ -2.19
VPS29-212ENST00000621131 KRTAP20-2Q3LI61 65 aa1.32□□□□□ -2.2
VPS29-212ENST00000621131 SYNE1Q8NF91 8797 aaKnown RBP1.3□□□□□ -2.2
VPS29-212ENST00000621131 KRTAP6-1Q3LI64 71 aa1.3□□□□□ -2.2
VPS29-212ENST00000621131 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
VPS29-212ENST00000621131 KRTAP6-2Q3LI66 62 aa1.21□□□□□ -2.22
VPS29-212ENST00000621131 PRM1P04553 51 aa1.03□□□□□ -2.24
VPS29-212ENST00000621131 PHGR1C9JFL3 82 aa0.97□□□□□ -2.25
VPS29-212ENST00000621131 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms