RNA–Protein interactions for RNA: ENST00000621128.4

NCAM1-228, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene NCAM1, Length 4,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-228ENST00000621128 LCE3BQ5TA77 95 aa2.99□□□□□ -1.93
NCAM1-228ENST00000621128 MT1MQ8N339 61 aa2.99□□□□□ -1.93
NCAM1-228ENST00000621128 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
NCAM1-228ENST00000621128 SPRR2DP22532 72 aa2.96□□□□□ -1.93
NCAM1-228ENST00000621128 MUC2Q02817 5179 aa2.96□□□□□ -1.94
NCAM1-228ENST00000621128 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
NCAM1-228ENST00000621128 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
NCAM1-228ENST00000621128 KRTAP2-3P0C7H8 128 aa2.86□□□□□ -1.95
NCAM1-228ENST00000621128 KRTAP2-4Q9BYR9 128 aa2.86□□□□□ -1.95
NCAM1-228ENST00000621128 KRTAP2-1Q9BYU5 128 aa2.86□□□□□ -1.95
NCAM1-228ENST00000621128 KRTAP9-2Q9BYQ4 174 aa2.85□□□□□ -1.95
NCAM1-228ENST00000621128 KRTAP4-3Q9BYR4 195 aa2.84□□□□□ -1.95
NCAM1-228ENST00000621128 LOC100996750A0A140TA64 210 aa2.83□□□□□ -1.96
NCAM1-228ENST00000621128 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
NCAM1-228ENST00000621128 KRTAP9-6A8MVA2 160 aa2.78□□□□□ -1.96
NCAM1-228ENST00000621128 MT1AP04731 61 aa2.77□□□□□ -1.97
NCAM1-228ENST00000621128 KRTAP9-6A0A140TA67 174 aa2.76□□□□□ -1.97
NCAM1-228ENST00000621128 MT3P25713 68 aa2.76□□□□□ -1.97
NCAM1-228ENST00000621128 LCE1AQ5T7P2 110 aa2.74□□□□□ -1.97
NCAM1-228ENST00000621128 LCE5AQ5TCM9 118 aa2.74□□□□□ -1.97
NCAM1-228ENST00000621128 USH2AO75445 5202 aa2.71□□□□□ -1.97
NCAM1-228ENST00000621128 KRTAP6-3Q3LI67 103 aa2.64□□□□□ -1.99
NCAM1-228ENST00000621128 OBSCNQ5VST9 7968 aa2.6□□□□□ -1.99
NCAM1-228ENST00000621128 KRTAP6-1Q3LI64 71 aa2.6□□□□□ -1.99
NCAM1-228ENST00000621128 PRM1P04553 51 aa2.58□□□□□ -2
NCAM1-228ENST00000621128 MT4P47944 62 aa2.57□□□□□ -2
NCAM1-228ENST00000621128 KRTAP4-9Q9BYQ8 210 aa2.56□□□□□ -2
NCAM1-228ENST00000621128 KRTAP9-7A8MTY7 169 aa2.56□□□□□ -2
NCAM1-228ENST00000621128 KRTAP9-4Q9BYQ2 154 aa2.55□□□□□ -2
NCAM1-228ENST00000621128 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.53□□□□□ -2
NCAM1-228ENST00000621128 SYNE2Q8WXH0 6885 aaKnown RBP2.52□□□□□ -2.01
NCAM1-228ENST00000621128 KMT2DO14686 5537 aa2.49□□□□□ -2.01
NCAM1-228ENST00000621128 DSTQ03001 7570 aaKnown RBP2.49□□□□□ -2.01
NCAM1-228ENST00000621128 KRTAP5-9P26371 169 aa2.49□□□□□ -2.01
NCAM1-228ENST00000621128 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
NCAM1-228ENST00000621128 LCE4AQ5TA78 99 aa2.47□□□□□ -2.01
NCAM1-228ENST00000621128 SSPOA2VEC9 5147 aa2.47□□□□□ -2.01
NCAM1-228ENST00000621128 FCGBPQ9Y6R7 5405 aaPredicted RBP2.47□□□□□ -2.01
NCAM1-228ENST00000621128 KRTAP20-1Q3LI63 56 aa2.47□□□□□ -2.01
NCAM1-228ENST00000621128 LCE1DQ5T752 114 aa2.42□□□□□ -2.02
NCAM1-228ENST00000621128 LCE1BQ5T7P3 118 aa2.39□□□□□ -2.03
NCAM1-228ENST00000621128 KRTAP2-2Q9BYT5 123 aa2.38□□□□□ -2.03
NCAM1-228ENST00000621128 MACF1Q9UPN3 7388 aaKnown RBP2.37□□□□□ -2.03
NCAM1-228ENST00000621128 MUC12Q9UKN1 5478 aa2.36□□□□□ -2.03
NCAM1-228ENST00000621128 KRTAP5-5Q701N2 237 aaPredicted RBP2.2□□□□□ -2.06
NCAM1-228ENST00000621128 MDN1Q9NU22 5596 aa2.19□□□□□ -2.06
NCAM1-228ENST00000621128 NEBP20929 6669 aa2.18□□□□□ -2.06
NCAM1-228ENST00000621128 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
NCAM1-228ENST00000621128 KRTAP9-9Q9BYP9 154 aa2.16□□□□□ -2.06
NCAM1-228ENST00000621128 KRTAP4-6Q9BYQ5 205 aa2.15□□□□□ -2.06
NCAM1-228ENST00000621128 KRTAP5-4Q6L8H1 288 aa2.07□□□□□ -2.08
NCAM1-228ENST00000621128 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
NCAM1-228ENST00000621128 LCE1EQ5T753 118 aa1.99□□□□□ -2.09
NCAM1-228ENST00000621128 LCE1CQ5T751 118 aa1.99□□□□□ -2.09
NCAM1-228ENST00000621128 LCE1FQ5T754 118 aa1.99□□□□□ -2.09
NCAM1-228ENST00000621128 GPR98Q8WXG9 6306 aa1.99□□□□□ -2.09
NCAM1-228ENST00000621128 KRTAP4-11Q9BYQ6 195 aa1.9□□□□□ -2.11
NCAM1-228ENST00000621128 KRTAP5-2Q701N4 177 aa1.85□□□□□ -2.11
NCAM1-228ENST00000621128 KRTAP5-3Q6L8H2 238 aa1.8□□□□□ -2.12
NCAM1-228ENST00000621128 KRTAP4-12Q9BQ66 201 aa1.76□□□□□ -2.13
NCAM1-228ENST00000621128 MUC5ACP98088 5654 aa1.74□□□□□ -2.13
NCAM1-228ENST00000621128 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
NCAM1-228ENST00000621128 KRTAP4-4Q9BYR3 166 aa1.7□□□□□ -2.14
NCAM1-228ENST00000621128 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
NCAM1-228ENST00000621128 KRTAP4-2Q9BYR5 136 aa1.67□□□□□ -2.14
NCAM1-228ENST00000621128 AHNAK2Q8IVF2 5795 aa1.63□□□□□ -2.15
NCAM1-228ENST00000621128 KRTAP5-8O75690 187 aa1.6□□□□□ -2.15
NCAM1-228ENST00000621128 KRTAP5-1Q6L8H4 278 aa1.57□□□□□ -2.16
NCAM1-228ENST00000621128 KRTAP5-11Q6L8G4 156 aa1.54□□□□□ -2.16
NCAM1-228ENST00000621128 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.51□□□□□ -2.17
NCAM1-228ENST00000621128 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
NCAM1-228ENST00000621128 MUC5BQ9HC84 5762 aaPredicted RBP1.46□□□□□ -2.18
NCAM1-228ENST00000621128 KRTAP5-7Q6L8G8 165 aa1.4□□□□□ -2.19
NCAM1-228ENST00000621128 AHNAKQ09666 5890 aaKnown RBP1.4□□□□□ -2.19
NCAM1-228ENST00000621128 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
NCAM1-228ENST00000621128 PHGR1C9JFL3 82 aa1.28□□□□□ -2.21
NCAM1-228ENST00000621128 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms