RNA–Protein interactions for RNA: ENST00000620578.4

COPS7B-224, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2 BASIC

Gene COPS7B, Length 2,500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-224ENST00000620578 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.49□□□□□ -1.53
COPS7B-224ENST00000620578 DSTQ03001 7570 aaKnown RBP5.46□□□□□ -1.53
COPS7B-224ENST00000620578 KRTAP4-7Q9BYR0 210 aa5.44□□□□□ -1.54
COPS7B-224ENST00000620578 INE1O15225 51 aa5.43□□□□□ -1.54
COPS7B-224ENST00000620578 MT1LQ93083 61 aa5.4□□□□□ -1.55
COPS7B-224ENST00000620578 SPRR5A0A1B0GTR4 108 aa5.38□□□□□ -1.55
COPS7B-224ENST00000620578 KRTAP5-9P26371 169 aa5.33□□□□□ -1.56
COPS7B-224ENST00000620578 KRTAP4-3Q9BYR4 195 aa5.3□□□□□ -1.56
COPS7B-224ENST00000620578 LCE3CQ5T5A8 94 aa5.28□□□□□ -1.56
COPS7B-224ENST00000620578 KRTAP19-3Q7Z4W3 81 aa5.28□□□□□ -1.56
COPS7B-224ENST00000620578 KRTAP6-3Q3LI67 103 aa5.24□□□□□ -1.57
COPS7B-224ENST00000620578 LCE1AQ5T7P2 110 aa5.24□□□□□ -1.57
COPS7B-224ENST00000620578 KRTAP9-7A8MTY7 169 aa5.21□□□□□ -1.58
COPS7B-224ENST00000620578 LCE5AQ5TCM9 118 aa5.21□□□□□ -1.58
COPS7B-224ENST00000620578 SPRR2EP22531 72 aa5.2□□□□□ -1.58
COPS7B-224ENST00000620578 SPRR2BP35325 72 aa5.2□□□□□ -1.58
COPS7B-224ENST00000620578 SPRR2AP35326 72 aa5.2□□□□□ -1.58
COPS7B-224ENST00000620578 MT1MQ8N339 61 aa5.2□□□□□ -1.58
COPS7B-224ENST00000620578 MT1GP13640 62 aa5.19□□□□□ -1.58
COPS7B-224ENST00000620578 KRTAP9-6A8MVA2 160 aa5.15□□□□□ -1.59
COPS7B-224ENST00000620578 NEBP20929 6669 aa5.11□□□□□ -1.59
COPS7B-224ENST00000620578 LOC100996750A0A140TA64 210 aa5.1□□□□□ -1.59
COPS7B-224ENST00000620578 SPRR2DP22532 72 aa4.99□□□□□ -1.61
COPS7B-224ENST00000620578 KRTAP19-4Q3LI73 84 aa4.94□□□□□ -1.62
COPS7B-224ENST00000620578 SYNE1Q8NF91 8797 aaKnown RBP4.81□□□□□ -1.64
COPS7B-224ENST00000620578 LCE3BQ5TA77 95 aa4.8□□□□□ -1.64
COPS7B-224ENST00000620578 KRTAP5-5Q701N2 237 aaPredicted RBP4.66□□□□□ -1.66
COPS7B-224ENST00000620578 KRTAP9-4Q9BYQ2 154 aa4.66□□□□□ -1.66
COPS7B-224ENST00000620578 KRTAP6-1Q3LI64 71 aa4.62□□□□□ -1.67
COPS7B-224ENST00000620578 KRTAP2-3P0C7H8 128 aa4.58□□□□□ -1.68
COPS7B-224ENST00000620578 KRTAP2-4Q9BYR9 128 aa4.58□□□□□ -1.68
COPS7B-224ENST00000620578 LCE1FQ5T754 118 aa4.56□□□□□ -1.68
COPS7B-224ENST00000620578 KRTAP9-9Q9BYP9 154 aa4.56□□□□□ -1.68
COPS7B-224ENST00000620578 KRTAP20-1Q3LI63 56 aa4.55□□□□□ -1.68
COPS7B-224ENST00000620578 KRTAP2-1Q9BYU5 128 aa4.55□□□□□ -1.68
COPS7B-224ENST00000620578 LCE4AQ5TA78 99 aa4.52□□□□□ -1.69
COPS7B-224ENST00000620578 OBSCNQ5VST9 7968 aa4.52□□□□□ -1.69
COPS7B-224ENST00000620578 MT1AP04731 61 aa4.51□□□□□ -1.69
COPS7B-224ENST00000620578 KRTAP2-2Q9BYT5 123 aa4.5□□□□□ -1.69
COPS7B-224ENST00000620578 KRTAP4-9Q9BYQ8 210 aa4.48□□□□□ -1.69
COPS7B-224ENST00000620578 MT4P47944 62 aa4.45□□□□□ -1.7
COPS7B-224ENST00000620578 KRTAP5-4Q6L8H1 288 aa4.43□□□□□ -1.7
COPS7B-224ENST00000620578 KRTAP4-6Q9BYQ5 205 aa4.43□□□□□ -1.7
COPS7B-224ENST00000620578 HMCN1Q96RW7 5635 aa4.4□□□□□ -1.71
COPS7B-224ENST00000620578 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
COPS7B-224ENST00000620578 KRTAP12-4P60329 112 aa4.3□□□□□ -1.72
COPS7B-224ENST00000620578 KRTAP6-2Q3LI66 62 aa4.26□□□□□ -1.73
COPS7B-224ENST00000620578 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
COPS7B-224ENST00000620578 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.74
COPS7B-224ENST00000620578 MT3P25713 68 aa4.09□□□□□ -1.76
COPS7B-224ENST00000620578 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
COPS7B-224ENST00000620578 KRTAP5-3Q6L8H2 238 aa4.04□□□□□ -1.76
COPS7B-224ENST00000620578 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
COPS7B-224ENST00000620578 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
COPS7B-224ENST00000620578 AHNAK2Q8IVF2 5795 aa3.85□□□□□ -1.79
COPS7B-224ENST00000620578 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
COPS7B-224ENST00000620578 PRM1P04553 51 aa3.6□□□□□ -1.83
COPS7B-224ENST00000620578 KRTAP5-10Q6L8G5 202 aa3.55□□□□□ -1.84
COPS7B-224ENST00000620578 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
COPS7B-224ENST00000620578 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
COPS7B-224ENST00000620578 GPR98Q8WXG9 6306 aa3.54□□□□□ -1.84
COPS7B-224ENST00000620578 KRTAP5-8O75690 187 aa3.53□□□□□ -1.84
COPS7B-224ENST00000620578 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
COPS7B-224ENST00000620578 KRTAP4-2Q9BYR5 136 aa3.39□□□□□ -1.87
COPS7B-224ENST00000620578 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
COPS7B-224ENST00000620578 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
COPS7B-224ENST00000620578 KRTAP5-7Q6L8G8 165 aa3.28□□□□□ -1.88
COPS7B-224ENST00000620578 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
COPS7B-224ENST00000620578 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
COPS7B-224ENST00000620578 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
COPS7B-224ENST00000620578 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
COPS7B-224ENST00000620578 KRTAP5-11Q6L8G4 156 aa2.89□□□□□ -1.95
COPS7B-224ENST00000620578 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
COPS7B-224ENST00000620578 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
COPS7B-224ENST00000620578 PHGR1C9JFL3 82 aa2.53□□□□□ -2
COPS7B-224ENST00000620578 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.04
COPS7B-224ENST00000620578 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 77.7 ms