RNA–Protein interactions for RNA: ENST00000620443.1

GRIA3-207, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GRIA3, Length 4,943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-207ENST00000620443 KRTAP5-3Q6L8H2 238 aa2□□□□□ -2.09
GRIA3-207ENST00000620443 LRP2P98164 4655 aa1.99□□□□□ -2.09
GRIA3-207ENST00000620443 KRTAP9-2Q9BYQ4 174 aa1.99□□□□□ -2.09
GRIA3-207ENST00000620443 HMCN2Q8NDA2 5059 aa1.99□□□□□ -2.09
GRIA3-207ENST00000620443 MT3P25713 68 aa1.98□□□□□ -2.09
GRIA3-207ENST00000620443 MT1LQ93083 61 aa1.97□□□□□ -2.09
GRIA3-207ENST00000620443 KRTAP19-6Q3LI70 58 aa1.96□□□□□ -2.1
GRIA3-207ENST00000620443 KRTAP20-1Q3LI63 56 aa1.95□□□□□ -2.1
GRIA3-207ENST00000620443 KRTAP4-12Q9BQ66 201 aa1.95□□□□□ -2.1
GRIA3-207ENST00000620443 KRTAP9-3Q9BYQ3 159 aa1.94□□□□□ -2.1
GRIA3-207ENST00000620443 UBR4Q5T4S7 5183 aa1.94□□□□□ -2.1
GRIA3-207ENST00000620443 KRTAP19-3Q7Z4W3 81 aa1.93□□□□□ -2.1
GRIA3-207ENST00000620443 KRTAP9-8Q9BYQ0 159 aa1.93□□□□□ -2.1
GRIA3-207ENST00000620443 KRTAP9-9Q9BYP9 154 aa1.92□□□□□ -2.1
GRIA3-207ENST00000620443 KRTAP9-4Q9BYQ2 154 aa1.92□□□□□ -2.1
GRIA3-207ENST00000620443 RNF213Q63HN8 5207 aa1.92□□□□□ -2.1
GRIA3-207ENST00000620443 KRTAP6-3Q3LI67 103 aa1.92□□□□□ -2.1
GRIA3-207ENST00000620443 FAT4Q6V0I7 4981 aa1.91□□□□□ -2.1
GRIA3-207ENST00000620443 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.91□□□□□ -2.1
GRIA3-207ENST00000620443 KRTAP2-3P0C7H8 128 aa1.9□□□□□ -2.11
GRIA3-207ENST00000620443 KRTAP2-4Q9BYR9 128 aa1.9□□□□□ -2.11
GRIA3-207ENST00000620443 LCE1AQ5T7P2 110 aa1.9□□□□□ -2.11
GRIA3-207ENST00000620443 MT1EP04732 61 aa1.9□□□□□ -2.11
GRIA3-207ENST00000620443 LCE1BQ5T7P3 118 aa1.89□□□□□ -2.11
GRIA3-207ENST00000620443 KRTAP9-7A8MTY7 169 aa1.86□□□□□ -2.11
GRIA3-207ENST00000620443 KRTAP4-9Q9BYQ8 210 aa1.86□□□□□ -2.11
GRIA3-207ENST00000620443 LCE1DQ5T752 114 aa1.86□□□□□ -2.11
GRIA3-207ENST00000620443 MT1MQ8N339 61 aa1.85□□□□□ -2.11
GRIA3-207ENST00000620443 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.12
GRIA3-207ENST00000620443 LCE4AQ5TA78 99 aa1.83□□□□□ -2.12
GRIA3-207ENST00000620443 KRTAP4-3Q9BYR4 195 aa1.83□□□□□ -2.12
GRIA3-207ENST00000620443 KRTAP2-1Q9BYU5 128 aa1.83□□□□□ -2.12
GRIA3-207ENST00000620443 KRTAP2-2Q9BYT5 123 aa1.8□□□□□ -2.12
GRIA3-207ENST00000620443 MT4P47944 62 aa1.78□□□□□ -2.13
GRIA3-207ENST00000620443 KRTAP6-2Q3LI66 62 aa1.77□□□□□ -2.13
GRIA3-207ENST00000620443 MT1AP04731 61 aa1.76□□□□□ -2.13
GRIA3-207ENST00000620443 KRTAP5-2Q701N4 177 aa1.74□□□□□ -2.13
GRIA3-207ENST00000620443 KRTAP19-7Q3SYF9 63 aa1.72□□□□□ -2.13
GRIA3-207ENST00000620443 LCE5AQ5TCM9 118 aa1.72□□□□□ -2.13
GRIA3-207ENST00000620443 KRTAP19-2Q3LHN2 52 aa1.71□□□□□ -2.14
GRIA3-207ENST00000620443 DSTQ03001 7570 aaKnown RBP1.7□□□□□ -2.14
GRIA3-207ENST00000620443 KRTAP9-6A8MVA2 160 aa1.7□□□□□ -2.14
GRIA3-207ENST00000620443 USH2AO75445 5202 aa1.67□□□□□ -2.14
GRIA3-207ENST00000620443 SYNE2Q8WXH0 6885 aaKnown RBP1.65□□□□□ -2.14
GRIA3-207ENST00000620443 GPR98Q8WXG9 6306 aa1.65□□□□□ -2.14
GRIA3-207ENST00000620443 KRTAP5-9P26371 169 aa1.65□□□□□ -2.15
GRIA3-207ENST00000620443 FCGBPQ9Y6R7 5405 aaPredicted RBP1.64□□□□□ -2.15
GRIA3-207ENST00000620443 KRTAP6-1Q3LI64 71 aa1.64□□□□□ -2.15
GRIA3-207ENST00000620443 MACF1Q9UPN3 7388 aaKnown RBP1.64□□□□□ -2.15
GRIA3-207ENST00000620443 FSIP2Q5CZC0 6907 aa1.64□□□□□ -2.15
GRIA3-207ENST00000620443 KMT2DO14686 5537 aa1.62□□□□□ -2.15
GRIA3-207ENST00000620443 SSPOA2VEC9 5147 aa1.61□□□□□ -2.15
GRIA3-207ENST00000620443 LCE1CQ5T751 118 aa1.6□□□□□ -2.15
GRIA3-207ENST00000620443 LCE1EQ5T753 118 aa1.6□□□□□ -2.15
GRIA3-207ENST00000620443 LCE1FQ5T754 118 aa1.6□□□□□ -2.15
GRIA3-207ENST00000620443 KRTAP4-11Q9BYQ6 195 aa1.56□□□□□ -2.16
GRIA3-207ENST00000620443 NEBP20929 6669 aa1.54□□□□□ -2.16
GRIA3-207ENST00000620443 KRTAP5-4Q6L8H1 288 aa1.5□□□□□ -2.17
GRIA3-207ENST00000620443 MUC12Q9UKN1 5478 aa1.47□□□□□ -2.17
GRIA3-207ENST00000620443 KRTAP5-5Q701N2 237 aaPredicted RBP1.45□□□□□ -2.18
GRIA3-207ENST00000620443 MDN1Q9NU22 5596 aa1.37□□□□□ -2.19
GRIA3-207ENST00000620443 HMCN1Q96RW7 5635 aa1.37□□□□□ -2.19
GRIA3-207ENST00000620443 KRTAP20-2Q3LI61 65 aa1.33□□□□□ -2.2
GRIA3-207ENST00000620443 KRTAP4-4Q9BYR3 166 aa1.32□□□□□ -2.2
GRIA3-207ENST00000620443 KRTAP5-7Q6L8G8 165 aa1.31□□□□□ -2.2
GRIA3-207ENST00000620443 MUC5BQ9HC84 5762 aaPredicted RBP1.29□□□□□ -2.2
GRIA3-207ENST00000620443 KRTAP5-8O75690 187 aa1.29□□□□□ -2.2
GRIA3-207ENST00000620443 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
GRIA3-207ENST00000620443 AHNAKQ09666 5890 aaKnown RBP1.24□□□□□ -2.21
GRIA3-207ENST00000620443 KRTAP5-11Q6L8G4 156 aa1.22□□□□□ -2.21
GRIA3-207ENST00000620443 KRTAP5-10Q6L8G5 202 aa1.21□□□□□ -2.22
GRIA3-207ENST00000620443 MUC5ACP98088 5654 aa1.16□□□□□ -2.22
GRIA3-207ENST00000620443 KRTAP5-1Q6L8H4 278 aa1.08□□□□□ -2.24
GRIA3-207ENST00000620443 PHGR1C9JFL3 82 aa0.99□□□□□ -2.25
GRIA3-207ENST00000620443 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
GRIA3-207ENST00000620443 KRTAP21-2Q3LI59 83 aa0.83□□□□□ -2.28
GRIA3-207ENST00000620443 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 172.4 ms