RNA–Protein interactions for RNA: ENST00000619920.4

PSMC3-213, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-213ENST00000619920 A0A0A0MQY5 61 aa5.32□□□□□ -1.56
PSMC3-213ENST00000619920 SPRR2FQ96RM1 72 aa5.31□□□□□ -1.56
PSMC3-213ENST00000619920 KRTAP19-3Q7Z4W3 81 aa5.29□□□□□ -1.56
PSMC3-213ENST00000619920 SYNE2Q8WXH0 6885 aaKnown RBP5.28□□□□□ -1.56
PSMC3-213ENST00000619920 MT1GP13640 62 aa5.27□□□□□ -1.57
PSMC3-213ENST00000619920 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.26□□□□□ -1.57
PSMC3-213ENST00000619920 KRTAP5-9P26371 169 aa5.25□□□□□ -1.57
PSMC3-213ENST00000619920 KRTAP4-7Q9BYR0 210 aa5.25□□□□□ -1.57
PSMC3-213ENST00000619920 MUC12Q9UKN1 5478 aa5.24□□□□□ -1.57
PSMC3-213ENST00000619920 MT1MQ8N339 61 aa5.2□□□□□ -1.58
PSMC3-213ENST00000619920 LCE5AQ5TCM9 118 aa5.19□□□□□ -1.58
PSMC3-213ENST00000619920 KRTAP9-6A8MVA2 160 aa5.14□□□□□ -1.59
PSMC3-213ENST00000619920 KRTAP6-3Q3LI67 103 aa5.1□□□□□ -1.59
PSMC3-213ENST00000619920 LCE1AQ5T7P2 110 aa5.08□□□□□ -1.6
PSMC3-213ENST00000619920 KRTAP4-3Q9BYR4 195 aa5.07□□□□□ -1.6
PSMC3-213ENST00000619920 MDN1Q9NU22 5596 aa5.02□□□□□ -1.61
PSMC3-213ENST00000619920 SPRR2EP22531 72 aa5.01□□□□□ -1.61
PSMC3-213ENST00000619920 SPRR2BP35325 72 aa5.01□□□□□ -1.61
PSMC3-213ENST00000619920 SPRR2AP35326 72 aa5.01□□□□□ -1.61
PSMC3-213ENST00000619920 LOC100996750A0A140TA64 210 aa4.92□□□□□ -1.62
PSMC3-213ENST00000619920 NEBP20929 6669 aa4.86□□□□□ -1.63
PSMC3-213ENST00000619920 KRTAP2-3P0C7H8 128 aa4.83□□□□□ -1.64
PSMC3-213ENST00000619920 SPRR2DP22532 72 aa4.83□□□□□ -1.64
PSMC3-213ENST00000619920 KRTAP2-4Q9BYR9 128 aa4.83□□□□□ -1.64
PSMC3-213ENST00000619920 KRTAP2-1Q9BYU5 128 aa4.83□□□□□ -1.64
PSMC3-213ENST00000619920 DSTQ03001 7570 aaKnown RBP4.78□□□□□ -1.64
PSMC3-213ENST00000619920 KRTAP5-5Q701N2 237 aaPredicted RBP4.68□□□□□ -1.66
PSMC3-213ENST00000619920 KRTAP20-1Q3LI63 56 aa4.64□□□□□ -1.67
PSMC3-213ENST00000619920 MT1AP04731 61 aa4.63□□□□□ -1.67
PSMC3-213ENST00000619920 LCE3BQ5TA77 95 aa4.63□□□□□ -1.67
PSMC3-213ENST00000619920 KRTAP6-1Q3LI64 71 aa4.57□□□□□ -1.68
PSMC3-213ENST00000619920 INE1O15225 51 aa4.51□□□□□ -1.69
PSMC3-213ENST00000619920 KRTAP5-4Q6L8H1 288 aa4.41□□□□□ -1.7
PSMC3-213ENST00000619920 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
PSMC3-213ENST00000619920 GPR98Q8WXG9 6306 aa4.4□□□□□ -1.7
PSMC3-213ENST00000619920 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.71
PSMC3-213ENST00000619920 KRTAP2-2Q9BYT5 123 aa4.39□□□□□ -1.71
PSMC3-213ENST00000619920 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
PSMC3-213ENST00000619920 LCE4AQ5TA78 99 aa4.31□□□□□ -1.72
PSMC3-213ENST00000619920 KRTAP4-9Q9BYQ8 210 aa4.21□□□□□ -1.74
PSMC3-213ENST00000619920 MT3P25713 68 aa4.19□□□□□ -1.74
PSMC3-213ENST00000619920 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
PSMC3-213ENST00000619920 MT4P47944 62 aa4.17□□□□□ -1.74
PSMC3-213ENST00000619920 KRTAP4-6Q9BYQ5 205 aa4.16□□□□□ -1.74
PSMC3-213ENST00000619920 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
PSMC3-213ENST00000619920 KRTAP20-2Q3LI61 65 aa4.1□□□□□ -1.75
PSMC3-213ENST00000619920 LCE1DQ5T752 114 aa4.09□□□□□ -1.75
PSMC3-213ENST00000619920 HMCN1Q96RW7 5635 aa4.06□□□□□ -1.76
PSMC3-213ENST00000619920 KRTAP5-2Q701N4 177 aa4.03□□□□□ -1.76
PSMC3-213ENST00000619920 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
PSMC3-213ENST00000619920 KRTAP5-3Q6L8H2 238 aa3.96□□□□□ -1.78
PSMC3-213ENST00000619920 AHNAK2Q8IVF2 5795 aa3.79□□□□□ -1.8
PSMC3-213ENST00000619920 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
PSMC3-213ENST00000619920 KRTAP5-10Q6L8G5 202 aa3.69□□□□□ -1.82
PSMC3-213ENST00000619920 KRTAP5-7Q6L8G8 165 aa3.63□□□□□ -1.83
PSMC3-213ENST00000619920 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
PSMC3-213ENST00000619920 PRM1P04553 51 aa3.55□□□□□ -1.84
PSMC3-213ENST00000619920 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
PSMC3-213ENST00000619920 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
PSMC3-213ENST00000619920 AHNAKQ09666 5890 aaKnown RBP3.42□□□□□ -1.86
PSMC3-213ENST00000619920 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
PSMC3-213ENST00000619920 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
PSMC3-213ENST00000619920 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
PSMC3-213ENST00000619920 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
PSMC3-213ENST00000619920 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
PSMC3-213ENST00000619920 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
PSMC3-213ENST00000619920 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
PSMC3-213ENST00000619920 KRTAP9-9Q9BYP9 154 aa3.05□□□□□ -1.92
PSMC3-213ENST00000619920 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
PSMC3-213ENST00000619920 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
PSMC3-213ENST00000619920 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
PSMC3-213ENST00000619920 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
PSMC3-213ENST00000619920 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
PSMC3-213ENST00000619920 PHGR1C9JFL3 82 aa2.54□□□□□ -2
PSMC3-213ENST00000619920 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
PSMC3-213ENST00000619920 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
PSMC3-213ENST00000619920 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 9.7 ms