RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 MT1MQ8N339 61 aa3.14□□□□□ -1.91
CUL4A-212ENST00000617546 PRM1P04553 51 aa3.14□□□□□ -1.91
CUL4A-212ENST00000617546 SPRR2DP22532 72 aa3.13□□□□□ -1.91
CUL4A-212ENST00000617546 UBR4Q5T4S7 5183 aa3.12□□□□□ -1.91
CUL4A-212ENST00000617546 LCE2AQ5TA79 106 aaPredicted RBP3.12□□□□□ -1.91
CUL4A-212ENST00000617546 KRTAP19-6Q3LI70 58 aa3.11□□□□□ -1.91
CUL4A-212ENST00000617546 KRTAP9-2Q9BYQ4 174 aa3.09□□□□□ -1.92
CUL4A-212ENST00000617546 MT3P25713 68 aa3.08□□□□□ -1.92
CUL4A-212ENST00000617546 KRTAP19-7Q3SYF9 63 aa3.07□□□□□ -1.92
CUL4A-212ENST00000617546 MT1AP04731 61 aa3.07□□□□□ -1.92
CUL4A-212ENST00000617546 MUC2Q02817 5179 aa3.05□□□□□ -1.92
CUL4A-212ENST00000617546 RNF213Q63HN8 5207 aa3.01□□□□□ -1.93
CUL4A-212ENST00000617546 KRTAP9-6A0A140TA67 174 aa2.97□□□□□ -1.93
CUL4A-212ENST00000617546 LOC100996750A0A140TA64 210 aa2.96□□□□□ -1.94
CUL4A-212ENST00000617546 FAT4Q6V0I7 4981 aa2.94□□□□□ -1.94
CUL4A-212ENST00000617546 KRTAP9-6A8MVA2 160 aa2.92□□□□□ -1.94
CUL4A-212ENST00000617546 KRTAP4-3Q9BYR4 195 aa2.88□□□□□ -1.95
CUL4A-212ENST00000617546 KRTAP6-3Q3LI67 103 aa2.81□□□□□ -1.96
CUL4A-212ENST00000617546 LCE1AQ5T7P2 110 aa2.8□□□□□ -1.96
CUL4A-212ENST00000617546 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
CUL4A-212ENST00000617546 KRTAP4-9Q9BYQ8 210 aa2.77□□□□□ -1.97
CUL4A-212ENST00000617546 KRTAP9-7A8MTY7 169 aa2.76□□□□□ -1.97
CUL4A-212ENST00000617546 KRTAP9-4Q9BYQ2 154 aa2.76□□□□□ -1.97
CUL4A-212ENST00000617546 LCE5AQ5TCM9 118 aa2.74□□□□□ -1.97
CUL4A-212ENST00000617546 KRTAP6-1Q3LI64 71 aa2.73□□□□□ -1.97
CUL4A-212ENST00000617546 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
CUL4A-212ENST00000617546 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.71□□□□□ -1.98
CUL4A-212ENST00000617546 MT4P47944 62 aa2.67□□□□□ -1.98
CUL4A-212ENST00000617546 LCE1DQ5T752 114 aa2.64□□□□□ -1.99
CUL4A-212ENST00000617546 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
CUL4A-212ENST00000617546 KRTAP2-2Q9BYT5 123 aa2.61□□□□□ -1.99
CUL4A-212ENST00000617546 LCE4AQ5TA78 99 aa2.6□□□□□ -1.99
CUL4A-212ENST00000617546 FSIP2Q5CZC0 6907 aa2.58□□□□□ -2
CUL4A-212ENST00000617546 SSPOA2VEC9 5147 aa2.57□□□□□ -2
CUL4A-212ENST00000617546 SYNE1Q8NF91 8797 aaKnown RBP2.56□□□□□ -2
CUL4A-212ENST00000617546 USH2AO75445 5202 aa2.53□□□□□ -2.01
CUL4A-212ENST00000617546 SYNE2Q8WXH0 6885 aaKnown RBP2.49□□□□□ -2.01
CUL4A-212ENST00000617546 KRTAP5-9P26371 169 aa2.47□□□□□ -2.01
CUL4A-212ENST00000617546 GPR98Q8WXG9 6306 aa2.44□□□□□ -2.02
CUL4A-212ENST00000617546 FCGBPQ9Y6R7 5405 aaPredicted RBP2.43□□□□□ -2.02
CUL4A-212ENST00000617546 KMT2DO14686 5537 aa2.36□□□□□ -2.03
CUL4A-212ENST00000617546 OBSCNQ5VST9 7968 aa2.33□□□□□ -2.04
CUL4A-212ENST00000617546 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
CUL4A-212ENST00000617546 MACF1Q9UPN3 7388 aaKnown RBP2.32□□□□□ -2.04
CUL4A-212ENST00000617546 NEBP20929 6669 aa2.26□□□□□ -2.05
CUL4A-212ENST00000617546 KRTAP4-11Q9BYQ6 195 aa2.23□□□□□ -2.05
CUL4A-212ENST00000617546 MUC12Q9UKN1 5478 aa2.2□□□□□ -2.06
CUL4A-212ENST00000617546 KRTAP20-2Q3LI61 65 aa2.16□□□□□ -2.06
CUL4A-212ENST00000617546 KRTAP9-9Q9BYP9 154 aa2.15□□□□□ -2.06
CUL4A-212ENST00000617546 DSTQ03001 7570 aaKnown RBP2.14□□□□□ -2.07
CUL4A-212ENST00000617546 MDN1Q9NU22 5596 aa2.13□□□□□ -2.07
CUL4A-212ENST00000617546 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
CUL4A-212ENST00000617546 LCE1EQ5T753 118 aa2.13□□□□□ -2.07
CUL4A-212ENST00000617546 LCE1FQ5T754 118 aa2.13□□□□□ -2.07
CUL4A-212ENST00000617546 KRTAP5-4Q6L8H1 288 aa2.11□□□□□ -2.07
CUL4A-212ENST00000617546 KRTAP4-6Q9BYQ5 205 aa2.1□□□□□ -2.07
CUL4A-212ENST00000617546 KRTAP5-3Q6L8H2 238 aa1.84□□□□□ -2.12
CUL4A-212ENST00000617546 KRTAP5-10Q6L8G5 202 aa1.8□□□□□ -2.12
CUL4A-212ENST00000617546 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
CUL4A-212ENST00000617546 KRTAP4-4Q9BYR3 166 aa1.79□□□□□ -2.12
CUL4A-212ENST00000617546 HMCN1Q96RW7 5635 aa1.73□□□□□ -2.13
CUL4A-212ENST00000617546 KRTAP5-2Q701N4 177 aa1.73□□□□□ -2.13
CUL4A-212ENST00000617546 AHNAK2Q8IVF2 5795 aa1.72□□□□□ -2.13
CUL4A-212ENST00000617546 KRTAP4-12Q9BQ66 201 aa1.69□□□□□ -2.14
CUL4A-212ENST00000617546 KRTAP4-2Q9BYR5 136 aa1.69□□□□□ -2.14
CUL4A-212ENST00000617546 MUC5ACP98088 5654 aa1.65□□□□□ -2.14
CUL4A-212ENST00000617546 KRTAP5-8O75690 187 aa1.64□□□□□ -2.15
CUL4A-212ENST00000617546 KRTAP5-7Q6L8G8 165 aa1.61□□□□□ -2.15
CUL4A-212ENST00000617546 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
CUL4A-212ENST00000617546 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.56□□□□□ -2.16
CUL4A-212ENST00000617546 KRTAP5-11Q6L8G4 156 aa1.54□□□□□ -2.16
CUL4A-212ENST00000617546 KRTAP5-1Q6L8H4 278 aa1.54□□□□□ -2.16
CUL4A-212ENST00000617546 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
CUL4A-212ENST00000617546 AHNAKQ09666 5890 aaKnown RBP1.48□□□□□ -2.17
CUL4A-212ENST00000617546 MUC5BQ9HC84 5762 aaPredicted RBP1.45□□□□□ -2.18
CUL4A-212ENST00000617546 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
CUL4A-212ENST00000617546 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 37.7 ms