RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 KRTAP19-7Q3SYF9 63 aa7.51□□□□□ -1.21
SDHA-220ENST00000617470 LUZP6Q538Z0 58 aa7.5□□□□□ -1.21
SDHA-220ENST00000617470 MDN1Q9NU22 5596 aa7.43□□□□□ -1.22
SDHA-220ENST00000617470 MT1EP04732 61 aa7.42□□□□□ -1.22
SDHA-220ENST00000617470 SPRR2EP22531 72 aa7.4□□□□□ -1.23
SDHA-220ENST00000617470 SPRR2BP35325 72 aa7.4□□□□□ -1.23
SDHA-220ENST00000617470 SPRR2AP35326 72 aa7.4□□□□□ -1.23
SDHA-220ENST00000617470 LCE1AQ5T7P2 110 aa7.35□□□□□ -1.23
SDHA-220ENST00000617470 NEBP20929 6669 aa7.27□□□□□ -1.25
SDHA-220ENST00000617470 LCE3CQ5T5A8 94 aa7.23□□□□□ -1.25
SDHA-220ENST00000617470 KRTAP19-3Q7Z4W3 81 aa7.23□□□□□ -1.25
SDHA-220ENST00000617470 MT1LQ93083 61 aa7.22□□□□□ -1.25
SDHA-220ENST00000617470 LCE5AQ5TCM9 118 aa7.15□□□□□ -1.27
SDHA-220ENST00000617470 SPRR2DP22532 72 aa7.14□□□□□ -1.27
SDHA-220ENST00000617470 MT1GP13640 62 aa7.13□□□□□ -1.27
SDHA-220ENST00000617470 KRTAP4-7Q9BYR0 210 aa7.1□□□□□ -1.27
SDHA-220ENST00000617470 KRTAP19-4Q3LI73 84 aa7.06□□□□□ -1.28
SDHA-220ENST00000617470 MT1MQ8N339 61 aa7.02□□□□□ -1.29
SDHA-220ENST00000617470 KRTAP9-6A8MVA2 160 aa6.95□□□□□ -1.3
SDHA-220ENST00000617470 KRTAP20-1Q3LI63 56 aa6.93□□□□□ -1.3
SDHA-220ENST00000617470 KRTAP2-3P0C7H8 128 aa6.9□□□□□ -1.3
SDHA-220ENST00000617470 KRTAP2-4Q9BYR9 128 aa6.9□□□□□ -1.3
SDHA-220ENST00000617470 A0A0A0MQY5 61 aa6.89□□□□□ -1.31
SDHA-220ENST00000617470 KRTAP4-3Q9BYR4 195 aa6.89□□□□□ -1.31
SDHA-220ENST00000617470 LCE3BQ5TA77 95 aa6.88□□□□□ -1.31
SDHA-220ENST00000617470 DSTQ03001 7570 aaKnown RBP6.87□□□□□ -1.31
SDHA-220ENST00000617470 KRTAP2-2Q9BYT5 123 aa6.72□□□□□ -1.33
SDHA-220ENST00000617470 KRTAP2-1Q9BYU5 128 aa6.72□□□□□ -1.33
SDHA-220ENST00000617470 LOC100996750A0A140TA64 210 aa6.65□□□□□ -1.34
SDHA-220ENST00000617470 INE1O15225 51 aa6.36□□□□□ -1.39
SDHA-220ENST00000617470 KRTAP5-5Q701N2 237 aaPredicted RBP6.34□□□□□ -1.39
SDHA-220ENST00000617470 LCE4AQ5TA78 99 aa6.29□□□□□ -1.4
SDHA-220ENST00000617470 KRTAP5-4Q6L8H1 288 aa6.27□□□□□ -1.4
SDHA-220ENST00000617470 KRTAP4-9Q9BYQ8 210 aa6.27□□□□□ -1.4
SDHA-220ENST00000617470 MT4P47944 62 aa6.22□□□□□ -1.41
SDHA-220ENST00000617470 LCE1DQ5T752 114 aa6.17□□□□□ -1.42
SDHA-220ENST00000617470 MT1AP04731 61 aa6.12□□□□□ -1.43
SDHA-220ENST00000617470 KRTAP6-1Q3LI64 71 aa6.1□□□□□ -1.43
SDHA-220ENST00000617470 KRTAP4-6Q9BYQ5 205 aa6.09□□□□□ -1.43
SDHA-220ENST00000617470 KRTAP12-4P60329 112 aa6.07□□□□□ -1.44
SDHA-220ENST00000617470 SYNE1Q8NF91 8797 aaKnown RBP6.05□□□□□ -1.44
SDHA-220ENST00000617470 HMCN1Q96RW7 5635 aa6.05□□□□□ -1.44
SDHA-220ENST00000617470 KRTAP20-2Q3LI61 65 aa5.92□□□□□ -1.46
SDHA-220ENST00000617470 KRTAP9-4Q9BYQ2 154 aa5.86□□□□□ -1.47
SDHA-220ENST00000617470 KRTAP6-2Q3LI66 62 aa5.7□□□□□ -1.5
SDHA-220ENST00000617470 KRTAP5-3Q6L8H2 238 aa5.7□□□□□ -1.5
SDHA-220ENST00000617470 KRTAP5-2Q701N4 177 aa5.6□□□□□ -1.51
SDHA-220ENST00000617470 MT3P25713 68 aa5.59□□□□□ -1.51
SDHA-220ENST00000617470 AHNAK2Q8IVF2 5795 aa5.56□□□□□ -1.52
SDHA-220ENST00000617470 LCE3DQ9BYE3 92 aa5.44□□□□□ -1.54
SDHA-220ENST00000617470 GPR98Q8WXG9 6306 aa5.36□□□□□ -1.55
SDHA-220ENST00000617470 KRTAP5-10Q6L8G5 202 aa5.36□□□□□ -1.55
SDHA-220ENST00000617470 LCE3EQ5T5B0 92 aa5.31□□□□□ -1.56
SDHA-220ENST00000617470 OBSCNQ5VST9 7968 aa5.28□□□□□ -1.56
SDHA-220ENST00000617470 KRTAP4-11Q9BYQ6 195 aa5.25□□□□□ -1.57
SDHA-220ENST00000617470 KRTAP5-8O75690 187 aa5.05□□□□□ -1.6
SDHA-220ENST00000617470 KRTAP5-7Q6L8G8 165 aa5.04□□□□□ -1.6
SDHA-220ENST00000617470 KRTAP5-1Q6L8H4 278 aa4.93□□□□□ -1.62
SDHA-220ENST00000617470 LCE1EQ5T753 118 aa4.93□□□□□ -1.62
SDHA-220ENST00000617470 PRM1P04553 51 aa4.82□□□□□ -1.64
SDHA-220ENST00000617470 MUC5ACP98088 5654 aa4.78□□□□□ -1.64
SDHA-220ENST00000617470 LCE1BQ5T7P3 118 aa4.7□□□□□ -1.66
SDHA-220ENST00000617470 KRTAP9-9Q9BYP9 154 aa4.69□□□□□ -1.66
SDHA-220ENST00000617470 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
SDHA-220ENST00000617470 LCE1CQ5T751 118 aa4.59□□□□□ -1.67
SDHA-220ENST00000617470 MUC5BQ9HC84 5762 aaPredicted RBP4.5□□□□□ -1.69
SDHA-220ENST00000617470 AHNAKQ09666 5890 aaKnown RBP4.36□□□□□ -1.71
SDHA-220ENST00000617470 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
SDHA-220ENST00000617470 KRTAP5-11Q6L8G4 156 aa4.09□□□□□ -1.75
SDHA-220ENST00000617470 KRTAP4-12Q9BQ66 201 aa4.03□□□□□ -1.76
SDHA-220ENST00000617470 KRTAP21-2Q3LI59 83 aa4□□□□□ -1.77
SDHA-220ENST00000617470 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
SDHA-220ENST00000617470 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
SDHA-220ENST00000617470 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
SDHA-220ENST00000617470 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
SDHA-220ENST00000617470 KRTAP21-1Q3LI58 79 aa3.03□□□□□ -1.92
SDHA-220ENST00000617470 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms