RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 RNF213Q63HN8 5207 aa5.97□□□□□ -1.45
AC008878.3-201ENST00000617428 FAT4Q6V0I7 4981 aa5.97□□□□□ -1.45
AC008878.3-201ENST00000617428 LCE3EQ5T5B0 92 aa5.94□□□□□ -1.46
AC008878.3-201ENST00000617428 FLGP20930 4061 aaPredicted RBP5.94□□□□□ -1.46
AC008878.3-201ENST00000617428 MUC2Q02817 5179 aa5.9□□□□□ -1.47
AC008878.3-201ENST00000617428 MT1MQ8N339 61 aa5.88□□□□□ -1.47
AC008878.3-201ENST00000617428 LCE2AQ5TA79 106 aaPredicted RBP5.87□□□□□ -1.47
AC008878.3-201ENST00000617428 MT4P47944 62 aa5.83□□□□□ -1.48
AC008878.3-201ENST00000617428 KRTAP4-3Q9BYR4 195 aa5.77□□□□□ -1.49
AC008878.3-201ENST00000617428 LOC100996750A0A140TA64 210 aa5.74□□□□□ -1.49
AC008878.3-201ENST00000617428 MT3P25713 68 aa5.73□□□□□ -1.49
AC008878.3-201ENST00000617428 HMCN2Q8NDA2 5059 aa5.72□□□□□ -1.49
AC008878.3-201ENST00000617428 KRTAP9-6A0A140TA67 174 aa5.71□□□□□ -1.5
AC008878.3-201ENST00000617428 KRTAP19-7Q3SYF9 63 aa5.64□□□□□ -1.51
AC008878.3-201ENST00000617428 SYNE2Q8WXH0 6885 aaKnown RBP5.61□□□□□ -1.51
AC008878.3-201ENST00000617428 OBSCNQ5VST9 7968 aa5.59□□□□□ -1.51
AC008878.3-201ENST00000617428 LCE1BQ5T7P3 118 aa5.52□□□□□ -1.53
AC008878.3-201ENST00000617428 LCE1DQ5T752 114 aa5.51□□□□□ -1.53
AC008878.3-201ENST00000617428 MT1AP04731 61 aa5.43□□□□□ -1.54
AC008878.3-201ENST00000617428 KRTAP9-7A8MTY7 169 aa5.43□□□□□ -1.54
AC008878.3-201ENST00000617428 PRM1P04553 51 aa5.38□□□□□ -1.55
AC008878.3-201ENST00000617428 KRTAP20-1Q3LI63 56 aa5.35□□□□□ -1.55
AC008878.3-201ENST00000617428 KRTAP4-9Q9BYQ8 210 aa5.31□□□□□ -1.56
AC008878.3-201ENST00000617428 KRTAP2-3P0C7H8 128 aa5.3□□□□□ -1.56
AC008878.3-201ENST00000617428 KRTAP2-4Q9BYR9 128 aa5.3□□□□□ -1.56
AC008878.3-201ENST00000617428 KRTAP2-1Q9BYU5 128 aa5.3□□□□□ -1.56
AC008878.3-201ENST00000617428 KRTAP6-3Q3LI67 103 aa5.3□□□□□ -1.56
AC008878.3-201ENST00000617428 LCE1AQ5T7P2 110 aa5.29□□□□□ -1.56
AC008878.3-201ENST00000617428 DSTQ03001 7570 aaKnown RBP5.29□□□□□ -1.56
AC008878.3-201ENST00000617428 FCGBPQ9Y6R7 5405 aaPredicted RBP5.27□□□□□ -1.57
AC008878.3-201ENST00000617428 USH2AO75445 5202 aa5.25□□□□□ -1.57
AC008878.3-201ENST00000617428 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.23□□□□□ -1.57
AC008878.3-201ENST00000617428 MACF1Q9UPN3 7388 aaKnown RBP5.21□□□□□ -1.58
AC008878.3-201ENST00000617428 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
AC008878.3-201ENST00000617428 KRTAP6-1Q3LI64 71 aa5.12□□□□□ -1.59
AC008878.3-201ENST00000617428 KRTAP9-6A8MVA2 160 aa5.09□□□□□ -1.6
AC008878.3-201ENST00000617428 KRTAP6-2Q3LI66 62 aa5.08□□□□□ -1.6
AC008878.3-201ENST00000617428 KMT2DO14686 5537 aa5.06□□□□□ -1.6
AC008878.3-201ENST00000617428 KRTAP2-2Q9BYT5 123 aa5.03□□□□□ -1.6
AC008878.3-201ENST00000617428 LCE4AQ5TA78 99 aa4.99□□□□□ -1.61
AC008878.3-201ENST00000617428 KRTAP9-4Q9BYQ2 154 aa4.98□□□□□ -1.61
AC008878.3-201ENST00000617428 MDN1Q9NU22 5596 aa4.75□□□□□ -1.65
AC008878.3-201ENST00000617428 NEBP20929 6669 aa4.69□□□□□ -1.66
AC008878.3-201ENST00000617428 LCE1CQ5T751 118 aa4.67□□□□□ -1.66
AC008878.3-201ENST00000617428 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
AC008878.3-201ENST00000617428 LCE1FQ5T754 118 aa4.67□□□□□ -1.66
AC008878.3-201ENST00000617428 MUC12Q9UKN1 5478 aa4.63□□□□□ -1.67
AC008878.3-201ENST00000617428 MUC19Q7Z5P9 8384 aa4.61□□□□□ -1.67
AC008878.3-201ENST00000617428 SSPOA2VEC9 5147 aa4.61□□□□□ -1.67
AC008878.3-201ENST00000617428 GPR98Q8WXG9 6306 aa4.55□□□□□ -1.68
AC008878.3-201ENST00000617428 KRTAP5-9P26371 169 aa4.52□□□□□ -1.69
AC008878.3-201ENST00000617428 KRTAP4-6Q9BYQ5 205 aa4.39□□□□□ -1.71
AC008878.3-201ENST00000617428 KRTAP9-9Q9BYP9 154 aa4.39□□□□□ -1.71
AC008878.3-201ENST00000617428 KRTAP20-2Q3LI61 65 aa4.26□□□□□ -1.73
AC008878.3-201ENST00000617428 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
AC008878.3-201ENST00000617428 KRTAP4-12Q9BQ66 201 aa3.89□□□□□ -1.79
AC008878.3-201ENST00000617428 KRTAP4-2Q9BYR5 136 aa3.89□□□□□ -1.79
AC008878.3-201ENST00000617428 KRTAP5-4Q6L8H1 288 aa3.89□□□□□ -1.79
AC008878.3-201ENST00000617428 KRTAP4-4Q9BYR3 166 aa3.87□□□□□ -1.79
AC008878.3-201ENST00000617428 MUC5ACP98088 5654 aa3.83□□□□□ -1.8
AC008878.3-201ENST00000617428 HMCN1Q96RW7 5635 aa3.74□□□□□ -1.81
AC008878.3-201ENST00000617428 KRTAP5-5Q701N2 237 aaPredicted RBP3.7□□□□□ -1.82
AC008878.3-201ENST00000617428 AHNAK2Q8IVF2 5795 aa3.61□□□□□ -1.83
AC008878.3-201ENST00000617428 KRTAP5-3Q6L8H2 238 aa3.56□□□□□ -1.84
AC008878.3-201ENST00000617428 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
AC008878.3-201ENST00000617428 AHNAKQ09666 5890 aaKnown RBP3.05□□□□□ -1.92
AC008878.3-201ENST00000617428 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
AC008878.3-201ENST00000617428 KRTAP5-10Q6L8G5 202 aa3□□□□□ -1.93
AC008878.3-201ENST00000617428 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
AC008878.3-201ENST00000617428 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
AC008878.3-201ENST00000617428 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
AC008878.3-201ENST00000617428 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
AC008878.3-201ENST00000617428 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
AC008878.3-201ENST00000617428 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
AC008878.3-201ENST00000617428 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
AC008878.3-201ENST00000617428 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
AC008878.3-201ENST00000617428 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 80.5 ms