RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 SPRR2AP35326 72 aa4.34□□□□□ -1.71
PPP4R3B-206ENST00000616407 KMT2DO14686 5537 aa4.3□□□□□ -1.72
PPP4R3B-206ENST00000616407 KRTAP4-3Q9BYR4 195 aa4.29□□□□□ -1.72
PPP4R3B-206ENST00000616407 LCE3BQ5TA77 95 aa4.28□□□□□ -1.72
PPP4R3B-206ENST00000616407 MT1MQ8N339 61 aa4.28□□□□□ -1.72
PPP4R3B-206ENST00000616407 LCE2DQ5TA82 110 aaPredicted RBP4.27□□□□□ -1.73
PPP4R3B-206ENST00000616407 LOC100996750A0A140TA64 210 aa4.25□□□□□ -1.73
PPP4R3B-206ENST00000616407 KRTAP9-2Q9BYQ4 174 aa4.23□□□□□ -1.73
PPP4R3B-206ENST00000616407 KRTAP9-6A8MVA2 160 aa4.19□□□□□ -1.74
PPP4R3B-206ENST00000616407 SPRR2DP22532 72 aa4.17□□□□□ -1.74
PPP4R3B-206ENST00000616407 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
PPP4R3B-206ENST00000616407 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
PPP4R3B-206ENST00000616407 DSTQ03001 7570 aaKnown RBP4.11□□□□□ -1.75
PPP4R3B-206ENST00000616407 SSPOA2VEC9 5147 aa4.09□□□□□ -1.75
PPP4R3B-206ENST00000616407 FCGBPQ9Y6R7 5405 aaPredicted RBP4.09□□□□□ -1.75
PPP4R3B-206ENST00000616407 KRTAP2-3P0C7H8 128 aa4.05□□□□□ -1.76
PPP4R3B-206ENST00000616407 KRTAP2-4Q9BYR9 128 aa4.05□□□□□ -1.76
PPP4R3B-206ENST00000616407 KRTAP2-1Q9BYU5 128 aa4.05□□□□□ -1.76
PPP4R3B-206ENST00000616407 LCE3DQ9BYE3 92 aa4□□□□□ -1.77
PPP4R3B-206ENST00000616407 MUC12Q9UKN1 5478 aa3.98□□□□□ -1.77
PPP4R3B-206ENST00000616407 OBSCNQ5VST9 7968 aa3.97□□□□□ -1.77
PPP4R3B-206ENST00000616407 LCE5AQ5TCM9 118 aa3.97□□□□□ -1.77
PPP4R3B-206ENST00000616407 SYNE2Q8WXH0 6885 aaKnown RBP3.95□□□□□ -1.78
PPP4R3B-206ENST00000616407 LCE3EQ5T5B0 92 aa3.92□□□□□ -1.78
PPP4R3B-206ENST00000616407 MACF1Q9UPN3 7388 aaKnown RBP3.88□□□□□ -1.79
PPP4R3B-206ENST00000616407 MT1AP04731 61 aa3.87□□□□□ -1.79
PPP4R3B-206ENST00000616407 LCE1AQ5T7P2 110 aa3.86□□□□□ -1.79
PPP4R3B-206ENST00000616407 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
PPP4R3B-206ENST00000616407 KRTAP9-6A0A140TA67 174 aa3.82□□□□□ -1.8
PPP4R3B-206ENST00000616407 KRTAP6-1Q3LI64 71 aa3.81□□□□□ -1.8
PPP4R3B-206ENST00000616407 MT3P25713 68 aa3.78□□□□□ -1.8
PPP4R3B-206ENST00000616407 MT4P47944 62 aa3.74□□□□□ -1.81
PPP4R3B-206ENST00000616407 KRTAP6-3Q3LI67 103 aa3.74□□□□□ -1.81
PPP4R3B-206ENST00000616407 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.73□□□□□ -1.81
PPP4R3B-206ENST00000616407 PRM1P04553 51 aa3.63□□□□□ -1.83
PPP4R3B-206ENST00000616407 KRTAP9-7A8MTY7 169 aa3.62□□□□□ -1.83
PPP4R3B-206ENST00000616407 KRTAP5-9P26371 169 aa3.62□□□□□ -1.83
PPP4R3B-206ENST00000616407 KRTAP9-4Q9BYQ2 154 aa3.6□□□□□ -1.83
PPP4R3B-206ENST00000616407 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
PPP4R3B-206ENST00000616407 MDN1Q9NU22 5596 aa3.53□□□□□ -1.84
PPP4R3B-206ENST00000616407 LCE1DQ5T752 114 aa3.45□□□□□ -1.86
PPP4R3B-206ENST00000616407 LCE1BQ5T7P3 118 aa3.39□□□□□ -1.87
PPP4R3B-206ENST00000616407 LCE4AQ5TA78 99 aa3.38□□□□□ -1.87
PPP4R3B-206ENST00000616407 KRTAP20-1Q3LI63 56 aa3.37□□□□□ -1.87
PPP4R3B-206ENST00000616407 KRTAP2-2Q9BYT5 123 aa3.35□□□□□ -1.87
PPP4R3B-206ENST00000616407 KRTAP4-6Q9BYQ5 205 aa3.26□□□□□ -1.89
PPP4R3B-206ENST00000616407 KRTAP5-5Q701N2 237 aaPredicted RBP3.26□□□□□ -1.89
PPP4R3B-206ENST00000616407 NEBP20929 6669 aa3.24□□□□□ -1.89
PPP4R3B-206ENST00000616407 KRTAP20-2Q3LI61 65 aa3.15□□□□□ -1.91
PPP4R3B-206ENST00000616407 KRTAP5-4Q6L8H1 288 aa2.98□□□□□ -1.93
PPP4R3B-206ENST00000616407 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
PPP4R3B-206ENST00000616407 HMCN1Q96RW7 5635 aa2.8□□□□□ -1.96
PPP4R3B-206ENST00000616407 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
PPP4R3B-206ENST00000616407 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
PPP4R3B-206ENST00000616407 KRTAP4-11Q9BYQ6 195 aa2.75□□□□□ -1.97
PPP4R3B-206ENST00000616407 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
PPP4R3B-206ENST00000616407 GPR98Q8WXG9 6306 aa2.69□□□□□ -1.98
PPP4R3B-206ENST00000616407 KRTAP5-3Q6L8H2 238 aa2.67□□□□□ -1.98
PPP4R3B-206ENST00000616407 KRTAP9-9Q9BYP9 154 aa2.65□□□□□ -1.99
PPP4R3B-206ENST00000616407 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
PPP4R3B-206ENST00000616407 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
PPP4R3B-206ENST00000616407 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
PPP4R3B-206ENST00000616407 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
PPP4R3B-206ENST00000616407 KRTAP4-2Q9BYR5 136 aa2.53□□□□□ -2
PPP4R3B-206ENST00000616407 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
PPP4R3B-206ENST00000616407 AHNAK2Q8IVF2 5795 aa2.44□□□□□ -2.02
PPP4R3B-206ENST00000616407 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
PPP4R3B-206ENST00000616407 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
PPP4R3B-206ENST00000616407 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.05
PPP4R3B-206ENST00000616407 MUC5BQ9HC84 5762 aaPredicted RBP2.16□□□□□ -2.06
PPP4R3B-206ENST00000616407 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
PPP4R3B-206ENST00000616407 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
PPP4R3B-206ENST00000616407 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
PPP4R3B-206ENST00000616407 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
PPP4R3B-206ENST00000616407 PHGR1C9JFL3 82 aa1.84□□□□□ -2.12
PPP4R3B-206ENST00000616407 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
PPP4R3B-206ENST00000616407 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 453.2 ms