RNA–Protein interactions for RNA: ENST00000616114.4

PCDH15-229, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH15, Length 5,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-229ENST00000616114 MT1MQ8N339 61 aa2.83□□□□□ -1.96
PCDH15-229ENST00000616114 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
PCDH15-229ENST00000616114 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
PCDH15-229ENST00000616114 KRTAP2-3P0C7H8 128 aa2.77□□□□□ -1.97
PCDH15-229ENST00000616114 KRTAP2-4Q9BYR9 128 aa2.77□□□□□ -1.97
PCDH15-229ENST00000616114 KRTAP2-1Q9BYU5 128 aa2.77□□□□□ -1.97
PCDH15-229ENST00000616114 LCE2DQ5TA82 110 aaPredicted RBP2.76□□□□□ -1.97
PCDH15-229ENST00000616114 LOC100996750A0A140TA64 210 aa2.69□□□□□ -1.98
PCDH15-229ENST00000616114 KRTAP4-3Q9BYR4 195 aa2.68□□□□□ -1.98
PCDH15-229ENST00000616114 UBR4Q5T4S7 5183 aa2.66□□□□□ -1.98
PCDH15-229ENST00000616114 MT1AP04731 61 aa2.64□□□□□ -1.99
PCDH15-229ENST00000616114 MT3P25713 68 aa2.64□□□□□ -1.99
PCDH15-229ENST00000616114 KRTAP9-6A8MVA2 160 aa2.63□□□□□ -1.99
PCDH15-229ENST00000616114 KRTAP9-2Q9BYQ4 174 aa2.58□□□□□ -2
PCDH15-229ENST00000616114 MUC2Q02817 5179 aa2.57□□□□□ -2
PCDH15-229ENST00000616114 LCE5AQ5TCM9 118 aa2.55□□□□□ -2
PCDH15-229ENST00000616114 PRM1P04553 51 aa2.55□□□□□ -2
PCDH15-229ENST00000616114 LCE1AQ5T7P2 110 aa2.54□□□□□ -2
PCDH15-229ENST00000616114 KRTAP9-6A0A140TA67 174 aa2.53□□□□□ -2
PCDH15-229ENST00000616114 KRTAP20-1Q3LI63 56 aa2.5□□□□□ -2.01
PCDH15-229ENST00000616114 KRTAP6-1Q3LI64 71 aa2.47□□□□□ -2.01
PCDH15-229ENST00000616114 KRTAP4-9Q9BYQ8 210 aa2.45□□□□□ -2.02
PCDH15-229ENST00000616114 KRTAP9-4Q9BYQ2 154 aa2.44□□□□□ -2.02
PCDH15-229ENST00000616114 KRTAP6-3Q3LI67 103 aa2.43□□□□□ -2.02
PCDH15-229ENST00000616114 MT4P47944 62 aa2.43□□□□□ -2.02
PCDH15-229ENST00000616114 USH2AO75445 5202 aa2.42□□□□□ -2.02
PCDH15-229ENST00000616114 FSIP2Q5CZC0 6907 aa2.37□□□□□ -2.03
PCDH15-229ENST00000616114 KRTAP6-2Q3LI66 62 aa2.35□□□□□ -2.03
PCDH15-229ENST00000616114 KRTAP9-7A8MTY7 169 aa2.35□□□□□ -2.03
PCDH15-229ENST00000616114 SYNE1Q8NF91 8797 aaKnown RBP2.34□□□□□ -2.03
PCDH15-229ENST00000616114 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
PCDH15-229ENST00000616114 LCE4AQ5TA78 99 aa2.32□□□□□ -2.04
PCDH15-229ENST00000616114 LCE1DQ5T752 114 aa2.32□□□□□ -2.04
PCDH15-229ENST00000616114 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.29□□□□□ -2.04
PCDH15-229ENST00000616114 KRTAP5-9P26371 169 aa2.27□□□□□ -2.05
PCDH15-229ENST00000616114 KRTAP2-2Q9BYT5 123 aa2.27□□□□□ -2.05
PCDH15-229ENST00000616114 SYNE2Q8WXH0 6885 aaKnown RBP2.24□□□□□ -2.05
PCDH15-229ENST00000616114 KMT2DO14686 5537 aa2.22□□□□□ -2.05
PCDH15-229ENST00000616114 OBSCNQ5VST9 7968 aa2.21□□□□□ -2.06
PCDH15-229ENST00000616114 SSPOA2VEC9 5147 aa2.19□□□□□ -2.06
PCDH15-229ENST00000616114 FCGBPQ9Y6R7 5405 aaPredicted RBP2.15□□□□□ -2.07
PCDH15-229ENST00000616114 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
PCDH15-229ENST00000616114 LCE1EQ5T753 118 aa2.12□□□□□ -2.07
PCDH15-229ENST00000616114 LCE1FQ5T754 118 aa2.12□□□□□ -2.07
PCDH15-229ENST00000616114 MACF1Q9UPN3 7388 aaKnown RBP2.09□□□□□ -2.07
PCDH15-229ENST00000616114 KRTAP9-9Q9BYP9 154 aa2.08□□□□□ -2.08
PCDH15-229ENST00000616114 MUC12Q9UKN1 5478 aa2.06□□□□□ -2.08
PCDH15-229ENST00000616114 KRTAP5-5Q701N2 237 aaPredicted RBP2.05□□□□□ -2.08
PCDH15-229ENST00000616114 DSTQ03001 7570 aaKnown RBP2.03□□□□□ -2.08
PCDH15-229ENST00000616114 KRTAP20-2Q3LI61 65 aa2.02□□□□□ -2.09
PCDH15-229ENST00000616114 NEBP20929 6669 aa1.99□□□□□ -2.09
PCDH15-229ENST00000616114 KRTAP4-6Q9BYQ5 205 aa1.98□□□□□ -2.09
PCDH15-229ENST00000616114 KRTAP5-4Q6L8H1 288 aa1.93□□□□□ -2.1
PCDH15-229ENST00000616114 MDN1Q9NU22 5596 aa1.88□□□□□ -2.11
PCDH15-229ENST00000616114 KRTAP4-11Q9BYQ6 195 aa1.85□□□□□ -2.11
PCDH15-229ENST00000616114 GPR98Q8WXG9 6306 aa1.82□□□□□ -2.12
PCDH15-229ENST00000616114 KRTAP4-12Q9BQ66 201 aa1.71□□□□□ -2.14
PCDH15-229ENST00000616114 KRTAP5-2Q701N4 177 aa1.7□□□□□ -2.14
PCDH15-229ENST00000616114 KRTAP5-3Q6L8H2 238 aa1.67□□□□□ -2.14
PCDH15-229ENST00000616114 KRTAP4-4Q9BYR3 166 aa1.62□□□□□ -2.15
PCDH15-229ENST00000616114 KRTAP5-10Q6L8G5 202 aa1.6□□□□□ -2.15
PCDH15-229ENST00000616114 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
PCDH15-229ENST00000616114 KRTAP4-2Q9BYR5 136 aa1.58□□□□□ -2.16
PCDH15-229ENST00000616114 HMCN1Q96RW7 5635 aa1.53□□□□□ -2.16
PCDH15-229ENST00000616114 MUC5ACP98088 5654 aa1.52□□□□□ -2.17
PCDH15-229ENST00000616114 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
PCDH15-229ENST00000616114 KRTAP5-8O75690 187 aa1.45□□□□□ -2.18
PCDH15-229ENST00000616114 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.43□□□□□ -2.18
PCDH15-229ENST00000616114 KRTAP5-11Q6L8G4 156 aa1.43□□□□□ -2.18
PCDH15-229ENST00000616114 KRTAP5-1Q6L8H4 278 aa1.43□□□□□ -2.18
PCDH15-229ENST00000616114 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
PCDH15-229ENST00000616114 MUC5BQ9HC84 5762 aaPredicted RBP1.37□□□□□ -2.19
PCDH15-229ENST00000616114 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
PCDH15-229ENST00000616114 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
PCDH15-229ENST00000616114 KRTAP5-7Q6L8G8 165 aa1.27□□□□□ -2.21
PCDH15-229ENST00000616114 AHNAKQ09666 5890 aaKnown RBP1.24□□□□□ -2.21
PCDH15-229ENST00000616114 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 74.2 ms