RNA–Protein interactions for RNA: ENST00000614484.4

SRRT-215, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-215ENST00000614484 SPRR2FQ96RM1 72 aa4.43□□□□□ -1.7
SRRT-215ENST00000614484 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
SRRT-215ENST00000614484 KRTAP9-7A8MTY7 169 aa4.39□□□□□ -1.71
SRRT-215ENST00000614484 KRTAP19-5Q3LI72 72 aa4.38□□□□□ -1.71
SRRT-215ENST00000614484 KRTAP19-7Q3SYF9 63 aa4.31□□□□□ -1.72
SRRT-215ENST00000614484 KRTAP6-3Q3LI67 103 aa4.24□□□□□ -1.73
SRRT-215ENST00000614484 MT1EP04732 61 aa4.22□□□□□ -1.73
SRRT-215ENST00000614484 SPRR2EP22531 72 aa4.22□□□□□ -1.73
SRRT-215ENST00000614484 SPRR2BP35325 72 aa4.22□□□□□ -1.73
SRRT-215ENST00000614484 SPRR2AP35326 72 aa4.22□□□□□ -1.73
SRRT-215ENST00000614484 KRTAP5-9P26371 169 aa4.21□□□□□ -1.74
SRRT-215ENST00000614484 LCE3CQ5T5A8 94 aa4.2□□□□□ -1.74
SRRT-215ENST00000614484 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
SRRT-215ENST00000614484 NEBP20929 6669 aa4.18□□□□□ -1.74
SRRT-215ENST00000614484 LCE1AQ5T7P2 110 aa4.15□□□□□ -1.74
SRRT-215ENST00000614484 KRTAP2-3P0C7H8 128 aa4.13□□□□□ -1.75
SRRT-215ENST00000614484 KRTAP2-4Q9BYR9 128 aa4.13□□□□□ -1.75
SRRT-215ENST00000614484 KRTAP2-1Q9BYU5 128 aa4.13□□□□□ -1.75
SRRT-215ENST00000614484 KRTAP4-3Q9BYR4 195 aa4.13□□□□□ -1.75
SRRT-215ENST00000614484 MT1LQ93083 61 aa4.11□□□□□ -1.75
SRRT-215ENST00000614484 KRTAP19-3Q7Z4W3 81 aa4.09□□□□□ -1.75
SRRT-215ENST00000614484 KRTAP9-6A8MVA2 160 aa4.08□□□□□ -1.76
SRRT-215ENST00000614484 SPRR2DP22532 72 aa4.05□□□□□ -1.76
SRRT-215ENST00000614484 KRTAP19-4Q3LI73 84 aa4.02□□□□□ -1.77
SRRT-215ENST00000614484 LCE5AQ5TCM9 118 aa4.02□□□□□ -1.77
SRRT-215ENST00000614484 LCE1EQ5T753 118 aa4□□□□□ -1.77
SRRT-215ENST00000614484 MT1MQ8N339 61 aa3.99□□□□□ -1.77
SRRT-215ENST00000614484 MT1GP13640 62 aa3.98□□□□□ -1.77
SRRT-215ENST00000614484 LOC100996750A0A140TA64 210 aa3.93□□□□□ -1.78
SRRT-215ENST00000614484 KRTAP12-4P60329 112 aa3.93□□□□□ -1.78
SRRT-215ENST00000614484 LCE3BQ5TA77 95 aa3.89□□□□□ -1.79
SRRT-215ENST00000614484 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
SRRT-215ENST00000614484 LCE1DQ5T752 114 aa3.84□□□□□ -1.8
SRRT-215ENST00000614484 KRTAP20-1Q3LI63 56 aa3.83□□□□□ -1.8
SRRT-215ENST00000614484 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
SRRT-215ENST00000614484 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
SRRT-215ENST00000614484 KRTAP4-9Q9BYQ8 210 aa3.71□□□□□ -1.82
SRRT-215ENST00000614484 MT4P47944 62 aa3.66□□□□□ -1.82
SRRT-215ENST00000614484 PRM1P04553 51 aa3.6□□□□□ -1.83
SRRT-215ENST00000614484 HMCN1Q96RW7 5635 aa3.59□□□□□ -1.83
SRRT-215ENST00000614484 KRTAP4-6Q9BYQ5 205 aa3.55□□□□□ -1.84
SRRT-215ENST00000614484 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
SRRT-215ENST00000614484 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
SRRT-215ENST00000614484 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
SRRT-215ENST00000614484 MT1AP04731 61 aa3.42□□□□□ -1.86
SRRT-215ENST00000614484 KRTAP9-4Q9BYQ2 154 aa3.42□□□□□ -1.86
SRRT-215ENST00000614484 LCE4AQ5TA78 99 aa3.4□□□□□ -1.86
SRRT-215ENST00000614484 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
SRRT-215ENST00000614484 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
SRRT-215ENST00000614484 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
SRRT-215ENST00000614484 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
SRRT-215ENST00000614484 MT3P25713 68 aa3.25□□□□□ -1.89
SRRT-215ENST00000614484 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
SRRT-215ENST00000614484 KRTAP5-3Q6L8H2 238 aa3.16□□□□□ -1.9
SRRT-215ENST00000614484 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
SRRT-215ENST00000614484 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
SRRT-215ENST00000614484 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
SRRT-215ENST00000614484 KRTAP4-11Q9BYQ6 195 aa2.96□□□□□ -1.94
SRRT-215ENST00000614484 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
SRRT-215ENST00000614484 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
SRRT-215ENST00000614484 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
SRRT-215ENST00000614484 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
SRRT-215ENST00000614484 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
SRRT-215ENST00000614484 MUC5BQ9HC84 5762 aaPredicted RBP2.77□□□□□ -1.97
SRRT-215ENST00000614484 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
SRRT-215ENST00000614484 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
SRRT-215ENST00000614484 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
SRRT-215ENST00000614484 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
SRRT-215ENST00000614484 KRTAP4-12Q9BQ66 201 aa2.46□□□□□ -2.02
SRRT-215ENST00000614484 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
SRRT-215ENST00000614484 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
SRRT-215ENST00000614484 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
SRRT-215ENST00000614484 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
SRRT-215ENST00000614484 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
SRRT-215ENST00000614484 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
SRRT-215ENST00000614484 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
SRRT-215ENST00000614484 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 9.6 ms