RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 KRTAP6-3Q3LI67 103 aa7.83□□□□□ -1.16
POLR2J3-220ENST00000613744 KRTAP2-3P0C7H8 128 aa7.83□□□□□ -1.16
POLR2J3-220ENST00000613744 KRTAP2-4Q9BYR9 128 aa7.83□□□□□ -1.16
POLR2J3-220ENST00000613744 KRTAP2-1Q9BYU5 128 aa7.83□□□□□ -1.16
POLR2J3-220ENST00000613744 SPRR2FQ96RM1 72 aa7.79□□□□□ -1.16
POLR2J3-220ENST00000613744 KRTAP5-9P26371 169 aa7.75□□□□□ -1.17
POLR2J3-220ENST00000613744 MUC12Q9UKN1 5478 aa7.74□□□□□ -1.17
POLR2J3-220ENST00000613744 KRTAP19-4Q3LI73 84 aa7.72□□□□□ -1.17
POLR2J3-220ENST00000613744 KRTAP9-6A8MVA2 160 aa7.69□□□□□ -1.18
POLR2J3-220ENST00000613744 KRTAP19-7Q3SYF9 63 aa7.66□□□□□ -1.18
POLR2J3-220ENST00000613744 MDN1Q9NU22 5596 aa7.64□□□□□ -1.19
POLR2J3-220ENST00000613744 MT1EP04732 61 aa7.55□□□□□ -1.2
POLR2J3-220ENST00000613744 SPRR2EP22531 72 aa7.5□□□□□ -1.21
POLR2J3-220ENST00000613744 SPRR2BP35325 72 aa7.5□□□□□ -1.21
POLR2J3-220ENST00000613744 SPRR2AP35326 72 aa7.5□□□□□ -1.21
POLR2J3-220ENST00000613744 LCE1AQ5T7P2 110 aa7.46□□□□□ -1.22
POLR2J3-220ENST00000613744 NEBP20929 6669 aa7.41□□□□□ -1.22
POLR2J3-220ENST00000613744 MT1LQ93083 61 aa7.34□□□□□ -1.23
POLR2J3-220ENST00000613744 KRTAP19-3Q7Z4W3 81 aa7.34□□□□□ -1.23
POLR2J3-220ENST00000613744 LCE5AQ5TCM9 118 aa7.26□□□□□ -1.25
POLR2J3-220ENST00000613744 KRTAP4-7Q9BYR0 210 aa7.26□□□□□ -1.25
POLR2J3-220ENST00000613744 SPRR2DP22532 72 aa7.22□□□□□ -1.25
POLR2J3-220ENST00000613744 MT1GP13640 62 aa7.21□□□□□ -1.26
POLR2J3-220ENST00000613744 MT1MQ8N339 61 aa7.14□□□□□ -1.27
POLR2J3-220ENST00000613744 DSTQ03001 7570 aaKnown RBP7.1□□□□□ -1.27
POLR2J3-220ENST00000613744 KRTAP4-3Q9BYR4 195 aa7.08□□□□□ -1.28
POLR2J3-220ENST00000613744 KRTAP20-1Q3LI63 56 aa6.98□□□□□ -1.29
POLR2J3-220ENST00000613744 LCE3BQ5TA77 95 aa6.97□□□□□ -1.29
POLR2J3-220ENST00000613744 KRTAP12-4P60329 112 aa6.96□□□□□ -1.3
POLR2J3-220ENST00000613744 KRTAP2-2Q9BYT5 123 aa6.77□□□□□ -1.33
POLR2J3-220ENST00000613744 LOC100996750A0A140TA64 210 aa6.75□□□□□ -1.33
POLR2J3-220ENST00000613744 MT1AP04731 61 aa6.54□□□□□ -1.36
POLR2J3-220ENST00000613744 KRTAP5-5Q701N2 237 aaPredicted RBP6.45□□□□□ -1.38
POLR2J3-220ENST00000613744 KRTAP4-9Q9BYQ8 210 aa6.41□□□□□ -1.38
POLR2J3-220ENST00000613744 KRTAP5-4Q6L8H1 288 aa6.36□□□□□ -1.39
POLR2J3-220ENST00000613744 KRTAP4-6Q9BYQ5 205 aa6.35□□□□□ -1.39
POLR2J3-220ENST00000613744 MT4P47944 62 aa6.34□□□□□ -1.4
POLR2J3-220ENST00000613744 LCE4AQ5TA78 99 aa6.33□□□□□ -1.4
POLR2J3-220ENST00000613744 LCE3EQ5T5B0 92 aa6.3□□□□□ -1.4
POLR2J3-220ENST00000613744 LCE3DQ9BYE3 92 aa6.29□□□□□ -1.4
POLR2J3-220ENST00000613744 LCE1DQ5T752 114 aa6.26□□□□□ -1.41
POLR2J3-220ENST00000613744 PRM1P04553 51 aa6.22□□□□□ -1.41
POLR2J3-220ENST00000613744 KRTAP6-1Q3LI64 71 aa6.22□□□□□ -1.41
POLR2J3-220ENST00000613744 SYNE1Q8NF91 8797 aaKnown RBP6.17□□□□□ -1.42
POLR2J3-220ENST00000613744 HMCN1Q96RW7 5635 aa6.16□□□□□ -1.42
POLR2J3-220ENST00000613744 KRTAP20-2Q3LI61 65 aa6.01□□□□□ -1.45
POLR2J3-220ENST00000613744 KRTAP9-4Q9BYQ2 154 aa5.95□□□□□ -1.46
POLR2J3-220ENST00000613744 KRTAP6-2Q3LI66 62 aa5.86□□□□□ -1.47
POLR2J3-220ENST00000613744 KRTAP5-3Q6L8H2 238 aa5.79□□□□□ -1.48
POLR2J3-220ENST00000613744 KRTAP5-2Q701N4 177 aa5.68□□□□□ -1.5
POLR2J3-220ENST00000613744 MT3P25713 68 aa5.65□□□□□ -1.5
POLR2J3-220ENST00000613744 AHNAK2Q8IVF2 5795 aa5.64□□□□□ -1.51
POLR2J3-220ENST00000613744 KRTAP4-12Q9BQ66 201 aa5.61□□□□□ -1.51
POLR2J3-220ENST00000613744 OBSCNQ5VST9 7968 aa5.53□□□□□ -1.52
POLR2J3-220ENST00000613744 GPR98Q8WXG9 6306 aa5.44□□□□□ -1.54
POLR2J3-220ENST00000613744 KRTAP9-9Q9BYP9 154 aa5.44□□□□□ -1.54
POLR2J3-220ENST00000613744 KRTAP5-10Q6L8G5 202 aa5.43□□□□□ -1.54
POLR2J3-220ENST00000613744 KRTAP4-11Q9BYQ6 195 aa5.32□□□□□ -1.56
POLR2J3-220ENST00000613744 KRTAP5-8O75690 187 aa5.13□□□□□ -1.59
POLR2J3-220ENST00000613744 KRTAP5-7Q6L8G8 165 aa5.07□□□□□ -1.6
POLR2J3-220ENST00000613744 KRTAP5-1Q6L8H4 278 aa5.02□□□□□ -1.61
POLR2J3-220ENST00000613744 LCE1EQ5T753 118 aa4.96□□□□□ -1.61
POLR2J3-220ENST00000613744 KRTAP4-2Q9BYR5 136 aa4.93□□□□□ -1.62
POLR2J3-220ENST00000613744 MUC5ACP98088 5654 aa4.83□□□□□ -1.64
POLR2J3-220ENST00000613744 LCE1BQ5T7P3 118 aa4.79□□□□□ -1.64
POLR2J3-220ENST00000613744 LCE1CQ5T751 118 aa4.64□□□□□ -1.67
POLR2J3-220ENST00000613744 MUC5BQ9HC84 5762 aaPredicted RBP4.58□□□□□ -1.68
POLR2J3-220ENST00000613744 AHNAKQ09666 5890 aaKnown RBP4.37□□□□□ -1.71
POLR2J3-220ENST00000613744 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.26□□□□□ -1.73
POLR2J3-220ENST00000613744 KRTAP5-11Q6L8G4 156 aa4.13□□□□□ -1.75
POLR2J3-220ENST00000613744 KRTAP21-1Q3LI58 79 aa4.09□□□□□ -1.76
POLR2J3-220ENST00000613744 KRTAP21-2Q3LI59 83 aa4.06□□□□□ -1.76
POLR2J3-220ENST00000613744 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
POLR2J3-220ENST00000613744 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
POLR2J3-220ENST00000613744 PHGR1C9JFL3 82 aa3.57□□□□□ -1.84
POLR2J3-220ENST00000613744 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
POLR2J3-220ENST00000613744 MUC16Q8WXI7 14507 aa2.25□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms