RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 A0A0D9SG42 100 aa2.26□□□□□ -2.05
SYCP1-209ENST00000613524 KRTAP10-12P60413 245 aa2.25□□□□□ -2.05
SYCP1-209ENST00000613524 KRTAP12-2P59991 146 aa2.24□□□□□ -2.05
SYCP1-209ENST00000613524 KMT2DO14686 5537 aa2.24□□□□□ -2.05
SYCP1-209ENST00000613524 KRTAP10-7P60409 375 aaPredicted RBP2.23□□□□□ -2.05
SYCP1-209ENST00000613524 C10orf95Q9H7T3 257 aa2.23□□□□□ -2.05
SYCP1-209ENST00000613524 KRTAP12-1P59990 96 aa2.22□□□□□ -2.05
SYCP1-209ENST00000613524 M0QZ58 72 aa2.21□□□□□ -2.06
SYCP1-209ENST00000613524 SPINT4Q6UDR6 99 aa2.21□□□□□ -2.06
SYCP1-209ENST00000613524 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
SYCP1-209ENST00000613524 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
SYCP1-209ENST00000613524 MT3P25713 68 aa2.19□□□□□ -2.06
SYCP1-209ENST00000613524 MT1BP07438 61 aa2.14□□□□□ -2.07
SYCP1-209ENST00000613524 MUC12Q9UKN1 5478 aa2.14□□□□□ -2.07
SYCP1-209ENST00000613524 LCE1EQ5T753 118 aa2.14□□□□□ -2.07
SYCP1-209ENST00000613524 PLAC4Q8WY50 150 aa2.14□□□□□ -2.07
SYCP1-209ENST00000613524 SPRR2GQ9BYE4 73 aa2.11□□□□□ -2.07
SYCP1-209ENST00000613524 MDN1Q9NU22 5596 aa2.1□□□□□ -2.07
SYCP1-209ENST00000613524 KRTAP19-6Q3LI70 58 aa2.09□□□□□ -2.07
SYCP1-209ENST00000613524 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
SYCP1-209ENST00000613524 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
SYCP1-209ENST00000613524 PRO2289Q9P1D8 64 aa2.07□□□□□ -2.08
SYCP1-209ENST00000613524 KRTAP19-8Q3LI54 63 aa2.06□□□□□ -2.08
SYCP1-209ENST00000613524 DSTQ03001 7570 aaKnown RBP2.05□□□□□ -2.08
SYCP1-209ENST00000613524 KRTAP10-5P60370 271 aa2.04□□□□□ -2.08
SYCP1-209ENST00000613524 MT1XP80297 61 aa2.03□□□□□ -2.08
SYCP1-209ENST00000613524 SPRR2FQ96RM1 72 aa2.03□□□□□ -2.08
SYCP1-209ENST00000613524 KRTAP8-1Q8IUC2 63 aa2□□□□□ -2.09
SYCP1-209ENST00000613524 PP632Q6XCG6 107 aa1.99□□□□□ -2.09
SYCP1-209ENST00000613524 GPR98Q8WXG9 6306 aa1.96□□□□□ -2.09
SYCP1-209ENST00000613524 SPRR2EP22531 72 aa1.96□□□□□ -2.1
SYCP1-209ENST00000613524 SPRR2BP35325 72 aa1.96□□□□□ -2.1
SYCP1-209ENST00000613524 SPRR2AP35326 72 aa1.96□□□□□ -2.1
SYCP1-209ENST00000613524 KRTAP6-3Q3LI67 103 aa1.95□□□□□ -2.1
SYCP1-209ENST00000613524 SPRR5A0A1B0GTR4 108 aa1.93□□□□□ -2.1
SYCP1-209ENST00000613524 NEBP20929 6669 aa1.93□□□□□ -2.1
SYCP1-209ENST00000613524 TNP1P09430 55 aa1.92□□□□□ -2.1
SYCP1-209ENST00000613524 KRTAP5-8O75690 187 aa1.89□□□□□ -2.11
SYCP1-209ENST00000613524 KRTAP4-3Q9BYR4 195 aa1.88□□□□□ -2.11
SYCP1-209ENST00000613524 SPRR2DP22532 72 aa1.87□□□□□ -2.11
SYCP1-209ENST00000613524 KRTAP20-1Q3LI63 56 aa1.87□□□□□ -2.11
SYCP1-209ENST00000613524 LCE3AQ5TA76 89 aa1.85□□□□□ -2.11
SYCP1-209ENST00000613524 KRTAP19-5Q3LI72 72 aa1.85□□□□□ -2.11
SYCP1-209ENST00000613524 OBSCNQ5VST9 7968 aa1.82□□□□□ -2.12
SYCP1-209ENST00000613524 KRTAP19-7Q3SYF9 63 aa1.8□□□□□ -2.12
SYCP1-209ENST00000613524 MT1EP04732 61 aa1.79□□□□□ -2.12
SYCP1-209ENST00000613524 SYNE1Q8NF91 8797 aaKnown RBP1.78□□□□□ -2.12
SYCP1-209ENST00000613524 KRTAP2-3P0C7H8 128 aa1.77□□□□□ -2.13
SYCP1-209ENST00000613524 KRTAP2-4Q9BYR9 128 aa1.77□□□□□ -2.13
SYCP1-209ENST00000613524 KRTAP19-3Q7Z4W3 81 aa1.76□□□□□ -2.13
SYCP1-209ENST00000613524 KRTAP12-3P60328 96 aa1.75□□□□□ -2.13
SYCP1-209ENST00000613524 MT4P47944 62 aa1.73□□□□□ -2.13
SYCP1-209ENST00000613524 KRTAP2-1Q9BYU5 128 aa1.73□□□□□ -2.13
SYCP1-209ENST00000613524 MT1LQ93083 61 aa1.72□□□□□ -2.13
SYCP1-209ENST00000613524 KRTAP9-6A8MVA2 160 aa1.72□□□□□ -2.13
SYCP1-209ENST00000613524 MT1MQ8N339 61 aa1.71□□□□□ -2.14
SYCP1-209ENST00000613524 INE1O15225 51 aa1.7□□□□□ -2.14
SYCP1-209ENST00000613524 MT1GP13640 62 aa1.69□□□□□ -2.14
SYCP1-209ENST00000613524 KRTAP5-5Q701N2 237 aaPredicted RBP1.64□□□□□ -2.15
SYCP1-209ENST00000613524 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.16
SYCP1-209ENST00000613524 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
SYCP1-209ENST00000613524 KRTAP12-4P60329 112 aa1.52□□□□□ -2.17
SYCP1-209ENST00000613524 KRTAP6-1Q3LI64 71 aa1.5□□□□□ -2.17
SYCP1-209ENST00000613524 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
SYCP1-209ENST00000613524 KRTAP20-2Q3LI61 65 aa1.48□□□□□ -2.17
SYCP1-209ENST00000613524 KRTAP5-7Q6L8G8 165 aa1.45□□□□□ -2.18
SYCP1-209ENST00000613524 KRTAP6-2Q3LI66 62 aa1.45□□□□□ -2.18
SYCP1-209ENST00000613524 MT1AP04731 61 aa1.42□□□□□ -2.18
SYCP1-209ENST00000613524 KRTAP5-10Q6L8G5 202 aa1.39□□□□□ -2.19
SYCP1-209ENST00000613524 MUC5ACP98088 5654 aa1.37□□□□□ -2.19
SYCP1-209ENST00000613524 LCE1CQ5T751 118 aa1.32□□□□□ -2.2
SYCP1-209ENST00000613524 LCE1BQ5T7P3 118 aa1.32□□□□□ -2.2
SYCP1-209ENST00000613524 PRM1P04553 51 aa1.24□□□□□ -2.21
SYCP1-209ENST00000613524 KRTAP21-2Q3LI59 83 aa0.92□□□□□ -2.26
SYCP1-209ENST00000613524 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
SYCP1-209ENST00000613524 KRTAP21-1Q3LI58 79 aa0.81□□□□□ -2.28
SYCP1-209ENST00000613524 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 179 ms