RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 MT1EP04732 61 aa2.87□□□□□ -1.95
TMCO1-208ENST00000612311 FSIP2Q5CZC0 6907 aa2.86□□□□□ -1.95
TMCO1-208ENST00000612311 KRTAP19-3Q7Z4W3 81 aa2.85□□□□□ -1.95
TMCO1-208ENST00000612311 KRTAP9-2Q9BYQ4 174 aa2.83□□□□□ -1.96
TMCO1-208ENST00000612311 KRTAP12-4P60329 112 aa2.83□□□□□ -1.96
TMCO1-208ENST00000612311 MUC2Q02817 5179 aa2.81□□□□□ -1.96
TMCO1-208ENST00000612311 KRTAP19-6Q3LI70 58 aa2.81□□□□□ -1.96
TMCO1-208ENST00000612311 KRTAP9-6A0A140TA67 174 aa2.8□□□□□ -1.96
TMCO1-208ENST00000612311 SPRR2DP22532 72 aa2.78□□□□□ -1.96
TMCO1-208ENST00000612311 KRTAP19-7Q3SYF9 63 aa2.76□□□□□ -1.97
TMCO1-208ENST00000612311 MT1MQ8N339 61 aa2.75□□□□□ -1.97
TMCO1-208ENST00000612311 KRTAP5-3Q6L8H2 238 aa2.74□□□□□ -1.97
TMCO1-208ENST00000612311 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
TMCO1-208ENST00000612311 KRTAP9-9Q9BYP9 154 aa2.72□□□□□ -1.97
TMCO1-208ENST00000612311 KRTAP9-4Q9BYQ2 154 aa2.72□□□□□ -1.97
TMCO1-208ENST00000612311 KRTAP4-3Q9BYR4 195 aa2.7□□□□□ -1.98
TMCO1-208ENST00000612311 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
TMCO1-208ENST00000612311 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
TMCO1-208ENST00000612311 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
TMCO1-208ENST00000612311 OBSCNQ5VST9 7968 aa2.58□□□□□ -2
TMCO1-208ENST00000612311 KRTAP2-3P0C7H8 128 aa2.58□□□□□ -2
TMCO1-208ENST00000612311 KRTAP2-4Q9BYR9 128 aa2.58□□□□□ -2
TMCO1-208ENST00000612311 KRTAP2-1Q9BYU5 128 aa2.58□□□□□ -2
TMCO1-208ENST00000612311 KRTAP9-6A8MVA2 160 aa2.57□□□□□ -2
TMCO1-208ENST00000612311 MT3P25713 68 aa2.56□□□□□ -2
TMCO1-208ENST00000612311 MT1AP04731 61 aa2.54□□□□□ -2
TMCO1-208ENST00000612311 USH2AO75445 5202 aa2.51□□□□□ -2.01
TMCO1-208ENST00000612311 FCGBPQ9Y6R7 5405 aaPredicted RBP2.5□□□□□ -2.01
TMCO1-208ENST00000612311 DSTQ03001 7570 aaKnown RBP2.5□□□□□ -2.01
TMCO1-208ENST00000612311 LCE5AQ5TCM9 118 aa2.48□□□□□ -2.01
TMCO1-208ENST00000612311 MT4P47944 62 aa2.47□□□□□ -2.01
TMCO1-208ENST00000612311 KRTAP4-9Q9BYQ8 210 aa2.47□□□□□ -2.01
TMCO1-208ENST00000612311 PRM1P04553 51 aa2.46□□□□□ -2.02
TMCO1-208ENST00000612311 SYNE2Q8WXH0 6885 aaKnown RBP2.46□□□□□ -2.02
TMCO1-208ENST00000612311 LCE1AQ5T7P2 110 aa2.45□□□□□ -2.02
TMCO1-208ENST00000612311 KRTAP6-1Q3LI64 71 aa2.42□□□□□ -2.02
TMCO1-208ENST00000612311 LCE1DQ5T752 114 aa2.4□□□□□ -2.02
TMCO1-208ENST00000612311 KMT2DO14686 5537 aa2.4□□□□□ -2.02
TMCO1-208ENST00000612311 KRTAP6-3Q3LI67 103 aa2.38□□□□□ -2.03
TMCO1-208ENST00000612311 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
TMCO1-208ENST00000612311 KRTAP6-2Q3LI66 62 aa2.32□□□□□ -2.04
TMCO1-208ENST00000612311 KRTAP4-11Q9BYQ6 195 aa2.32□□□□□ -2.04
TMCO1-208ENST00000612311 KRTAP9-7A8MTY7 169 aa2.32□□□□□ -2.04
TMCO1-208ENST00000612311 MUC12Q9UKN1 5478 aa2.31□□□□□ -2.04
TMCO1-208ENST00000612311 SSPOA2VEC9 5147 aa2.3□□□□□ -2.04
TMCO1-208ENST00000612311 MACF1Q9UPN3 7388 aaKnown RBP2.27□□□□□ -2.05
TMCO1-208ENST00000612311 KRTAP20-1Q3LI63 56 aa2.23□□□□□ -2.05
TMCO1-208ENST00000612311 LCE4AQ5TA78 99 aa2.23□□□□□ -2.05
TMCO1-208ENST00000612311 KRTAP5-9P26371 169 aa2.2□□□□□ -2.06
TMCO1-208ENST00000612311 KRTAP2-2Q9BYT5 123 aa2.19□□□□□ -2.06
TMCO1-208ENST00000612311 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.14□□□□□ -2.07
TMCO1-208ENST00000612311 MDN1Q9NU22 5596 aa2.12□□□□□ -2.07
TMCO1-208ENST00000612311 NEBP20929 6669 aa2.03□□□□□ -2.08
TMCO1-208ENST00000612311 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
TMCO1-208ENST00000612311 KRTAP20-2Q3LI61 65 aa1.98□□□□□ -2.09
TMCO1-208ENST00000612311 KRTAP5-5Q701N2 237 aaPredicted RBP1.93□□□□□ -2.1
TMCO1-208ENST00000612311 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
TMCO1-208ENST00000612311 LCE1EQ5T753 118 aa1.87□□□□□ -2.11
TMCO1-208ENST00000612311 LCE1FQ5T754 118 aa1.87□□□□□ -2.11
TMCO1-208ENST00000612311 HMCN1Q96RW7 5635 aa1.84□□□□□ -2.11
TMCO1-208ENST00000612311 KRTAP5-4Q6L8H1 288 aa1.83□□□□□ -2.12
TMCO1-208ENST00000612311 GPR98Q8WXG9 6306 aa1.81□□□□□ -2.12
TMCO1-208ENST00000612311 KRTAP5-2Q701N4 177 aa1.78□□□□□ -2.12
TMCO1-208ENST00000612311 MUC5ACP98088 5654 aa1.75□□□□□ -2.13
TMCO1-208ENST00000612311 KRTAP4-4Q9BYR3 166 aa1.69□□□□□ -2.14
TMCO1-208ENST00000612311 KRTAP5-11Q6L8G4 156 aa1.66□□□□□ -2.14
TMCO1-208ENST00000612311 AHNAK2Q8IVF2 5795 aa1.58□□□□□ -2.16
TMCO1-208ENST00000612311 MUC5BQ9HC84 5762 aaPredicted RBP1.52□□□□□ -2.17
TMCO1-208ENST00000612311 KRTAP5-10Q6L8G5 202 aa1.52□□□□□ -2.17
TMCO1-208ENST00000612311 KRTAP5-1Q6L8H4 278 aa1.51□□□□□ -2.17
TMCO1-208ENST00000612311 KRTAP5-8O75690 187 aa1.5□□□□□ -2.17
TMCO1-208ENST00000612311 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
TMCO1-208ENST00000612311 AHNAKQ09666 5890 aaKnown RBP1.32□□□□□ -2.2
TMCO1-208ENST00000612311 KRTAP5-7Q6L8G8 165 aa1.23□□□□□ -2.21
TMCO1-208ENST00000612311 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
TMCO1-208ENST00000612311 PHGR1C9JFL3 82 aa1.15□□□□□ -2.22
TMCO1-208ENST00000612311 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 72.6 ms