RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
CLK4-215ENST00000611733 MUC12Q9UKN1 5478 aa4.51□□□□□ -1.69
CLK4-215ENST00000611733 PMAIP1Q13794 54 aa4.47□□□□□ -1.69
CLK4-215ENST00000611733 PRO0628Q9UI54 55 aa4.46□□□□□ -1.7
CLK4-215ENST00000611733 MDN1Q9NU22 5596 aa4.44□□□□□ -1.7
CLK4-215ENST00000611733 MT1EP04732 61 aa4.44□□□□□ -1.7
CLK4-215ENST00000611733 LCE1AQ5T7P2 110 aa4.4□□□□□ -1.7
CLK4-215ENST00000611733 LCE5AQ5TCM9 118 aa4.4□□□□□ -1.7
CLK4-215ENST00000611733 KRTAP23-1A1A580 65 aa4.4□□□□□ -1.71
CLK4-215ENST00000611733 SPRR2EP22531 72 aa4.39□□□□□ -1.71
CLK4-215ENST00000611733 SPRR2BP35325 72 aa4.39□□□□□ -1.71
CLK4-215ENST00000611733 SPRR2AP35326 72 aa4.39□□□□□ -1.71
CLK4-215ENST00000611733 H3BS24 57 aa4.38□□□□□ -1.71
CLK4-215ENST00000611733 KRTAP12-3P60328 96 aa4.38□□□□□ -1.71
CLK4-215ENST00000611733 PP632Q6XCG6 107 aa4.32□□□□□ -1.72
CLK4-215ENST00000611733 LCE4AQ5TA78 99 aa4.31□□□□□ -1.72
CLK4-215ENST00000611733 NEBP20929 6669 aa4.31□□□□□ -1.72
CLK4-215ENST00000611733 KRTAP19-3Q7Z4W3 81 aa4.31□□□□□ -1.72
CLK4-215ENST00000611733 MT1LQ93083 61 aa4.31□□□□□ -1.72
CLK4-215ENST00000611733 PRAC1Q96KF2 57 aa4.28□□□□□ -1.72
CLK4-215ENST00000611733 MT1GP13640 62 aa4.23□□□□□ -1.73
CLK4-215ENST00000611733 SPRR2DP22532 72 aa4.23□□□□□ -1.73
CLK4-215ENST00000611733 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.73
CLK4-215ENST00000611733 MT1MQ8N339 61 aa4.2□□□□□ -1.74
CLK4-215ENST00000611733 KRTAP4-3Q9BYR4 195 aa4.17□□□□□ -1.74
CLK4-215ENST00000611733 KTN1-AS1Q86SY8 53 aa4.16□□□□□ -1.74
CLK4-215ENST00000611733 KRTAP20-1Q3LI63 56 aa4.11□□□□□ -1.75
CLK4-215ENST00000611733 KRTAP2-3P0C7H8 128 aa4.1□□□□□ -1.75
CLK4-215ENST00000611733 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
CLK4-215ENST00000611733 KRTAP2-4Q9BYR9 128 aa4.1□□□□□ -1.75
CLK4-215ENST00000611733 DSTQ03001 7570 aaKnown RBP4.08□□□□□ -1.76
CLK4-215ENST00000611733 LCE3CQ5T5A8 94 aa4.08□□□□□ -1.76
CLK4-215ENST00000611733 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
CLK4-215ENST00000611733 KRTAP2-1Q9BYU5 128 aa4□□□□□ -1.77
CLK4-215ENST00000611733 KRTAP9-6A8MVA2 160 aa3.9□□□□□ -1.78
CLK4-215ENST00000611733 KRTAP5-5Q701N2 237 aaPredicted RBP3.82□□□□□ -1.8
CLK4-215ENST00000611733 KRTAP5-4Q6L8H1 288 aa3.77□□□□□ -1.81
CLK4-215ENST00000611733 SPRR5A0A1B0GTR4 108 aa3.76□□□□□ -1.81
CLK4-215ENST00000611733 MT4P47944 62 aa3.72□□□□□ -1.81
CLK4-215ENST00000611733 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
CLK4-215ENST00000611733 MT1AP04731 61 aa3.65□□□□□ -1.83
CLK4-215ENST00000611733 A0A0A0MQY5 61 aa3.64□□□□□ -1.83
CLK4-215ENST00000611733 SYNE1Q8NF91 8797 aaKnown RBP3.61□□□□□ -1.83
CLK4-215ENST00000611733 HMCN1Q96RW7 5635 aa3.59□□□□□ -1.83
CLK4-215ENST00000611733 KRTAP12-4P60329 112 aa3.58□□□□□ -1.84
CLK4-215ENST00000611733 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
CLK4-215ENST00000611733 KRTAP20-2Q3LI61 65 aa3.54□□□□□ -1.84
CLK4-215ENST00000611733 LUZP6Q538Z0 58 aa3.44□□□□□ -1.86
CLK4-215ENST00000611733 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
CLK4-215ENST00000611733 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
CLK4-215ENST00000611733 MT3P25713 68 aa3.31□□□□□ -1.88
CLK4-215ENST00000611733 AHNAK2Q8IVF2 5795 aa3.29□□□□□ -1.88
CLK4-215ENST00000611733 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
CLK4-215ENST00000611733 NDUFAF8A1L188 74 aa3.21□□□□□ -1.9
CLK4-215ENST00000611733 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
CLK4-215ENST00000611733 GPR98Q8WXG9 6306 aa3.16□□□□□ -1.9
CLK4-215ENST00000611733 OBSCNQ5VST9 7968 aa3.15□□□□□ -1.91
CLK4-215ENST00000611733 KRTAP5-8O75690 187 aa3.04□□□□□ -1.92
CLK4-215ENST00000611733 KRTAP5-7Q6L8G8 165 aa3.01□□□□□ -1.93
CLK4-215ENST00000611733 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
CLK4-215ENST00000611733 KRTAP5-1Q6L8H4 278 aa2.97□□□□□ -1.93
CLK4-215ENST00000611733 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
CLK4-215ENST00000611733 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.94
CLK4-215ENST00000611733 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
CLK4-215ENST00000611733 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
CLK4-215ENST00000611733 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
CLK4-215ENST00000611733 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
CLK4-215ENST00000611733 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
CLK4-215ENST00000611733 INE1O15225 51 aa2.57□□□□□ -2
CLK4-215ENST00000611733 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
CLK4-215ENST00000611733 PRM1P04553 51 aa2.41□□□□□ -2.02
CLK4-215ENST00000611733 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.03
CLK4-215ENST00000611733 LCE1FQ5T754 118 aa2.34□□□□□ -2.04
CLK4-215ENST00000611733 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
CLK4-215ENST00000611733 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
CLK4-215ENST00000611733 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
CLK4-215ENST00000611733 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 94.7 ms