RNA–Protein interactions for RNA: ENST00000611278.4

ZNF248-208, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best) BASIC

Gene ZNF248, Length 4,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-208ENST00000611278 KRTAP2-1Q9BYU5 128 aa3.5□□□□□ -1.85
ZNF248-208ENST00000611278 INE1O15225 51 aa3.48□□□□□ -1.85
ZNF248-208ENST00000611278 KRTAP10-12P60413 245 aa3.46□□□□□ -1.85
ZNF248-208ENST00000611278 MDN1Q9NU22 5596 aa3.43□□□□□ -1.86
ZNF248-208ENST00000611278 KMT2DO14686 5537 aa3.43□□□□□ -1.86
ZNF248-208ENST00000611278 LCE1AQ5T7P2 110 aa3.38□□□□□ -1.87
ZNF248-208ENST00000611278 LCE3BQ5TA77 95 aa3.34□□□□□ -1.87
ZNF248-208ENST00000611278 KRTAP23-1A1A580 65 aa3.33□□□□□ -1.88
ZNF248-208ENST00000611278 MT1XP80297 61 aa3.33□□□□□ -1.88
ZNF248-208ENST00000611278 GPR98Q8WXG9 6306 aa3.32□□□□□ -1.88
ZNF248-208ENST00000611278 KRTAP10-7P60409 375 aaPredicted RBP3.31□□□□□ -1.88
ZNF248-208ENST00000611278 SPRR5A0A1B0GTR4 108 aa3.3□□□□□ -1.88
ZNF248-208ENST00000611278 LCE3AQ5TA76 89 aa3.22□□□□□ -1.89
ZNF248-208ENST00000611278 MT1GP13640 62 aa3.2□□□□□ -1.9
ZNF248-208ENST00000611278 KRTAP19-4Q3LI73 84 aa3.19□□□□□ -1.9
ZNF248-208ENST00000611278 KRTAP19-3Q7Z4W3 81 aa3.17□□□□□ -1.9
ZNF248-208ENST00000611278 KRTAP4-8A0A0G2JLE6 195 aa3.16□□□□□ -1.9
ZNF248-208ENST00000611278 KRTAP4-8Q9BYQ9 185 aa3.16□□□□□ -1.9
ZNF248-208ENST00000611278 KRTAP12-3P60328 96 aa3.14□□□□□ -1.91
ZNF248-208ENST00000611278 LCE4AQ5TA78 99 aa3.12□□□□□ -1.91
ZNF248-208ENST00000611278 KRTAP12-4P60329 112 aa3.11□□□□□ -1.91
ZNF248-208ENST00000611278 KRTAP19-5Q3LI72 72 aa3.09□□□□□ -1.92
ZNF248-208ENST00000611278 MT1EP04732 61 aa3.05□□□□□ -1.92
ZNF248-208ENST00000611278 KRTAP4-9Q9BYQ8 210 aa3.04□□□□□ -1.92
ZNF248-208ENST00000611278 MT4P47944 62 aa3.02□□□□□ -1.93
ZNF248-208ENST00000611278 LCE5AQ5TCM9 118 aa3.01□□□□□ -1.93
ZNF248-208ENST00000611278 LCE1DQ5T752 114 aa2.99□□□□□ -1.93
ZNF248-208ENST00000611278 MT1MQ8N339 61 aa2.95□□□□□ -1.94
ZNF248-208ENST00000611278 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
ZNF248-208ENST00000611278 DSTQ03001 7570 aaKnown RBP2.93□□□□□ -1.94
ZNF248-208ENST00000611278 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
ZNF248-208ENST00000611278 MT1LQ93083 61 aa2.92□□□□□ -1.94
ZNF248-208ENST00000611278 HMCN1Q96RW7 5635 aa2.92□□□□□ -1.94
ZNF248-208ENST00000611278 KRTAP19-7Q3SYF9 63 aa2.91□□□□□ -1.94
ZNF248-208ENST00000611278 KRTAP5-7Q6L8G8 165 aa2.9□□□□□ -1.95
ZNF248-208ENST00000611278 LCE3CQ5T5A8 94 aa2.86□□□□□ -1.95
ZNF248-208ENST00000611278 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
ZNF248-208ENST00000611278 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
ZNF248-208ENST00000611278 KRTAP4-6Q9BYQ5 205 aa2.77□□□□□ -1.97
ZNF248-208ENST00000611278 OBSCNQ5VST9 7968 aa2.74□□□□□ -1.97
ZNF248-208ENST00000611278 KRTAP20-2Q3LI61 65 aa2.7□□□□□ -1.98
ZNF248-208ENST00000611278 KRTAP9-6A8MVA2 160 aa2.68□□□□□ -1.98
ZNF248-208ENST00000611278 KRTAP4-7Q9BYR0 210 aa2.67□□□□□ -1.98
ZNF248-208ENST00000611278 KRTAP4-3Q9BYR4 195 aa2.65□□□□□ -1.99
ZNF248-208ENST00000611278 MT1AP04731 61 aa2.63□□□□□ -1.99
ZNF248-208ENST00000611278 SYNE1Q8NF91 8797 aaKnown RBP2.62□□□□□ -1.99
ZNF248-208ENST00000611278 MT3P25713 68 aa2.62□□□□□ -1.99
ZNF248-208ENST00000611278 LOC100996750A0A140TA64 210 aa2.6□□□□□ -1.99
ZNF248-208ENST00000611278 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
ZNF248-208ENST00000611278 KRTAP9-9Q9BYP9 154 aa2.59□□□□□ -2
ZNF248-208ENST00000611278 KRTAP5-5Q701N2 237 aaPredicted RBP2.58□□□□□ -2
ZNF248-208ENST00000611278 KRTAP4-11Q9BYQ6 195 aa2.53□□□□□ -2
ZNF248-208ENST00000611278 KRTAP9-4Q9BYQ2 154 aa2.47□□□□□ -2.01
ZNF248-208ENST00000611278 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
ZNF248-208ENST00000611278 MUC5ACP98088 5654 aa2.45□□□□□ -2.02
ZNF248-208ENST00000611278 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
ZNF248-208ENST00000611278 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
ZNF248-208ENST00000611278 LCE1EQ5T753 118 aa2.41□□□□□ -2.02
ZNF248-208ENST00000611278 KRTAP6-2Q3LI66 62 aa2.4□□□□□ -2.03
ZNF248-208ENST00000611278 PRM1P04553 51 aa2.4□□□□□ -2.03
ZNF248-208ENST00000611278 KRTAP6-1Q3LI64 71 aa2.39□□□□□ -2.03
ZNF248-208ENST00000611278 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
ZNF248-208ENST00000611278 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
ZNF248-208ENST00000611278 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
ZNF248-208ENST00000611278 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
ZNF248-208ENST00000611278 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
ZNF248-208ENST00000611278 LCE1FQ5T754 118 aa2.14□□□□□ -2.07
ZNF248-208ENST00000611278 KRTAP4-12Q9BQ66 201 aa2.04□□□□□ -2.08
ZNF248-208ENST00000611278 KRTAP4-2Q9BYR5 136 aa2.03□□□□□ -2.08
ZNF248-208ENST00000611278 LCE1CQ5T751 118 aa1.99□□□□□ -2.09
ZNF248-208ENST00000611278 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.09
ZNF248-208ENST00000611278 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
ZNF248-208ENST00000611278 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
ZNF248-208ENST00000611278 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
ZNF248-208ENST00000611278 KRTAP4-4Q9BYR3 166 aa1.51□□□□□ -2.17
ZNF248-208ENST00000611278 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
ZNF248-208ENST00000611278 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 71.7 ms