RNA–Protein interactions for RNA: ENST00000610189.1

GPN1-211, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPN1, Length 1,778 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-211ENST00000610189 MUC12Q9UKN1 5478 aa4.75□□□□□ -1.65
GPN1-211ENST00000610189 KRTAP4-7Q9BYR0 210 aa4.73□□□□□ -1.65
GPN1-211ENST00000610189 H3BS24 57 aa4.72□□□□□ -1.65
GPN1-211ENST00000610189 MT1GP13640 62 aa4.7□□□□□ -1.66
GPN1-211ENST00000610189 KRTAP6-3Q3LI67 103 aa4.69□□□□□ -1.66
GPN1-211ENST00000610189 MT1MQ8N339 61 aa4.68□□□□□ -1.66
GPN1-211ENST00000610189 SYNE2Q8WXH0 6885 aaKnown RBP4.67□□□□□ -1.66
GPN1-211ENST00000610189 LCE5AQ5TCM9 118 aa4.67□□□□□ -1.66
GPN1-211ENST00000610189 LUZP6Q538Z0 58 aa4.65□□□□□ -1.66
GPN1-211ENST00000610189 LCE1AQ5T7P2 110 aa4.64□□□□□ -1.67
GPN1-211ENST00000610189 SPRR2EP22531 72 aa4.61□□□□□ -1.67
GPN1-211ENST00000610189 SPRR2BP35325 72 aa4.61□□□□□ -1.67
GPN1-211ENST00000610189 SPRR2AP35326 72 aa4.61□□□□□ -1.67
GPN1-211ENST00000610189 A0A0A0MQY5 61 aa4.6□□□□□ -1.67
GPN1-211ENST00000610189 KRTAP4-3Q9BYR4 195 aa4.6□□□□□ -1.67
GPN1-211ENST00000610189 NDUFAF8A1L188 74 aa4.58□□□□□ -1.68
GPN1-211ENST00000610189 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
GPN1-211ENST00000610189 KRTAP9-7A8MTY7 169 aa4.53□□□□□ -1.69
GPN1-211ENST00000610189 MDN1Q9NU22 5596 aa4.52□□□□□ -1.69
GPN1-211ENST00000610189 LOC100996750A0A140TA64 210 aa4.44□□□□□ -1.7
GPN1-211ENST00000610189 SPRR2DP22532 72 aa4.44□□□□□ -1.7
GPN1-211ENST00000610189 KRTAP4-6Q9BYQ5 205 aa4.4□□□□□ -1.71
GPN1-211ENST00000610189 DSTQ03001 7570 aaKnown RBP4.29□□□□□ -1.72
GPN1-211ENST00000610189 NEBP20929 6669 aa4.28□□□□□ -1.72
GPN1-211ENST00000610189 LCE3BQ5TA77 95 aa4.26□□□□□ -1.73
GPN1-211ENST00000610189 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
GPN1-211ENST00000610189 KRTAP2-3P0C7H8 128 aa4.2□□□□□ -1.74
GPN1-211ENST00000610189 KRTAP2-4Q9BYR9 128 aa4.2□□□□□ -1.74
GPN1-211ENST00000610189 KRTAP2-1Q9BYU5 128 aa4.2□□□□□ -1.74
GPN1-211ENST00000610189 MT1AP04731 61 aa4.14□□□□□ -1.75
GPN1-211ENST00000610189 KRTAP6-1Q3LI64 71 aa4.11□□□□□ -1.75
GPN1-211ENST00000610189 KRTAP20-1Q3LI63 56 aa4.03□□□□□ -1.76
GPN1-211ENST00000610189 KRTAP5-4Q6L8H1 288 aa4.01□□□□□ -1.77
GPN1-211ENST00000610189 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
GPN1-211ENST00000610189 LCE4AQ5TA78 99 aa3.92□□□□□ -1.78
GPN1-211ENST00000610189 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
GPN1-211ENST00000610189 SYNE1Q8NF91 8797 aaKnown RBP3.91□□□□□ -1.78
GPN1-211ENST00000610189 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
GPN1-211ENST00000610189 MT4P47944 62 aa3.86□□□□□ -1.79
GPN1-211ENST00000610189 KRTAP4-9Q9BYQ8 210 aa3.81□□□□□ -1.8
GPN1-211ENST00000610189 KRTAP4-12Q9BQ66 201 aa3.79□□□□□ -1.8
GPN1-211ENST00000610189 LCE1DQ5T752 114 aa3.79□□□□□ -1.8
GPN1-211ENST00000610189 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
GPN1-211ENST00000610189 KRTAP20-2Q3LI61 65 aa3.76□□□□□ -1.81
GPN1-211ENST00000610189 INE1O15225 51 aa3.75□□□□□ -1.81
GPN1-211ENST00000610189 MT3P25713 68 aa3.73□□□□□ -1.81
GPN1-211ENST00000610189 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.82
GPN1-211ENST00000610189 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
GPN1-211ENST00000610189 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
GPN1-211ENST00000610189 KRTAP5-3Q6L8H2 238 aa3.61□□□□□ -1.83
GPN1-211ENST00000610189 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
GPN1-211ENST00000610189 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
GPN1-211ENST00000610189 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.87
GPN1-211ENST00000610189 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
GPN1-211ENST00000610189 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
GPN1-211ENST00000610189 AHNAK2Q8IVF2 5795 aa3.27□□□□□ -1.89
GPN1-211ENST00000610189 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
GPN1-211ENST00000610189 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
GPN1-211ENST00000610189 KRTAP5-10Q6L8G5 202 aa3.12□□□□□ -1.91
GPN1-211ENST00000610189 KRTAP5-8O75690 187 aa3.12□□□□□ -1.91
GPN1-211ENST00000610189 PRM1P04553 51 aa3.09□□□□□ -1.91
GPN1-211ENST00000610189 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
GPN1-211ENST00000610189 KRTAP5-7Q6L8G8 165 aa3.02□□□□□ -1.93
GPN1-211ENST00000610189 LCE1CQ5T751 118 aa3□□□□□ -1.93
GPN1-211ENST00000610189 MUC5ACP98088 5654 aa3□□□□□ -1.93
GPN1-211ENST00000610189 GPR98Q8WXG9 6306 aa2.89□□□□□ -1.95
GPN1-211ENST00000610189 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
GPN1-211ENST00000610189 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
GPN1-211ENST00000610189 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
GPN1-211ENST00000610189 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.98
GPN1-211ENST00000610189 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
GPN1-211ENST00000610189 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
GPN1-211ENST00000610189 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
GPN1-211ENST00000610189 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
GPN1-211ENST00000610189 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
GPN1-211ENST00000610189 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
GPN1-211ENST00000610189 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 129.9 ms