RNA–Protein interactions for RNA: ENST00000609318.5

LARP4B-210, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

TSL 1 (best)

Gene LARP4B, Length 4,848 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-210ENST00000609318 KRTAP19-6Q3LI70 58 aa3.54□□□□□ -1.84
LARP4B-210ENST00000609318 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
LARP4B-210ENST00000609318 SPRR2DP22532 72 aa3.52□□□□□ -1.85
LARP4B-210ENST00000609318 MT1GP13640 62 aa3.52□□□□□ -1.85
LARP4B-210ENST00000609318 FSIP2Q5CZC0 6907 aa3.5□□□□□ -1.85
LARP4B-210ENST00000609318 MT1EP04732 61 aa3.48□□□□□ -1.85
LARP4B-210ENST00000609318 LCE2DQ5TA82 110 aaPredicted RBP3.48□□□□□ -1.85
LARP4B-210ENST00000609318 MT1LQ93083 61 aa3.47□□□□□ -1.85
LARP4B-210ENST00000609318 KRTAP19-3Q7Z4W3 81 aa3.44□□□□□ -1.86
LARP4B-210ENST00000609318 KRTAP4-7Q9BYR0 210 aa3.43□□□□□ -1.86
LARP4B-210ENST00000609318 KRTAP19-7Q3SYF9 63 aa3.39□□□□□ -1.87
LARP4B-210ENST00000609318 KRTAP9-7A8MTY7 169 aa3.35□□□□□ -1.87
LARP4B-210ENST00000609318 MT1MQ8N339 61 aa3.32□□□□□ -1.88
LARP4B-210ENST00000609318 USH2AO75445 5202 aa3.28□□□□□ -1.88
LARP4B-210ENST00000609318 MT3P25713 68 aa3.27□□□□□ -1.89
LARP4B-210ENST00000609318 KRTAP4-3Q9BYR4 195 aa3.24□□□□□ -1.89
LARP4B-210ENST00000609318 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
LARP4B-210ENST00000609318 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.22□□□□□ -1.89
LARP4B-210ENST00000609318 LOC100996750A0A140TA64 210 aa3.2□□□□□ -1.9
LARP4B-210ENST00000609318 PRM1P04553 51 aa3.18□□□□□ -1.9
LARP4B-210ENST00000609318 LCE1DQ5T752 114 aa3.18□□□□□ -1.9
LARP4B-210ENST00000609318 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
LARP4B-210ENST00000609318 SYNE2Q8WXH0 6885 aaKnown RBP3.14□□□□□ -1.91
LARP4B-210ENST00000609318 MT4P47944 62 aa3.13□□□□□ -1.91
LARP4B-210ENST00000609318 KRTAP20-1Q3LI63 56 aa3.12□□□□□ -1.91
LARP4B-210ENST00000609318 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
LARP4B-210ENST00000609318 KRTAP6-3Q3LI67 103 aa3.1□□□□□ -1.91
LARP4B-210ENST00000609318 MACF1Q9UPN3 7388 aaKnown RBP3.09□□□□□ -1.91
LARP4B-210ENST00000609318 KMT2DO14686 5537 aa3.09□□□□□ -1.92
LARP4B-210ENST00000609318 LCE5AQ5TCM9 118 aa3.08□□□□□ -1.92
LARP4B-210ENST00000609318 KRTAP2-3P0C7H8 128 aa3.07□□□□□ -1.92
LARP4B-210ENST00000609318 KRTAP2-4Q9BYR9 128 aa3.07□□□□□ -1.92
LARP4B-210ENST00000609318 KRTAP2-1Q9BYU5 128 aa3.07□□□□□ -1.92
LARP4B-210ENST00000609318 DSTQ03001 7570 aaKnown RBP3.06□□□□□ -1.92
LARP4B-210ENST00000609318 SSPOA2VEC9 5147 aa3.05□□□□□ -1.92
LARP4B-210ENST00000609318 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
LARP4B-210ENST00000609318 MT1AP04731 61 aa3.04□□□□□ -1.92
LARP4B-210ENST00000609318 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
LARP4B-210ENST00000609318 FCGBPQ9Y6R7 5405 aaPredicted RBP3.01□□□□□ -1.93
LARP4B-210ENST00000609318 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
LARP4B-210ENST00000609318 MUC12Q9UKN1 5478 aa2.91□□□□□ -1.94
LARP4B-210ENST00000609318 KRTAP4-9Q9BYQ8 210 aa2.89□□□□□ -1.95
LARP4B-210ENST00000609318 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
LARP4B-210ENST00000609318 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
LARP4B-210ENST00000609318 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
LARP4B-210ENST00000609318 KRTAP2-2Q9BYT5 123 aa2.87□□□□□ -1.95
LARP4B-210ENST00000609318 KRTAP5-9P26371 169 aa2.86□□□□□ -1.95
LARP4B-210ENST00000609318 NEBP20929 6669 aa2.84□□□□□ -1.95
LARP4B-210ENST00000609318 KRTAP9-4Q9BYQ2 154 aa2.82□□□□□ -1.96
LARP4B-210ENST00000609318 KRTAP6-2Q3LI66 62 aa2.78□□□□□ -1.96
LARP4B-210ENST00000609318 LCE4AQ5TA78 99 aa2.75□□□□□ -1.97
LARP4B-210ENST00000609318 MDN1Q9NU22 5596 aa2.67□□□□□ -1.98
LARP4B-210ENST00000609318 KRTAP4-6Q9BYQ5 205 aa2.55□□□□□ -2
LARP4B-210ENST00000609318 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
LARP4B-210ENST00000609318 KRTAP20-2Q3LI61 65 aa2.47□□□□□ -2.01
LARP4B-210ENST00000609318 KRTAP9-9Q9BYP9 154 aa2.46□□□□□ -2.02
LARP4B-210ENST00000609318 KRTAP5-4Q6L8H1 288 aa2.34□□□□□ -2.04
LARP4B-210ENST00000609318 KRTAP4-11Q9BYQ6 195 aa2.31□□□□□ -2.04
LARP4B-210ENST00000609318 KRTAP5-3Q6L8H2 238 aa2.15□□□□□ -2.06
LARP4B-210ENST00000609318 KRTAP4-4Q9BYR3 166 aa2.11□□□□□ -2.07
LARP4B-210ENST00000609318 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
LARP4B-210ENST00000609318 KRTAP5-2Q701N4 177 aa2.1□□□□□ -2.07
LARP4B-210ENST00000609318 MUC5ACP98088 5654 aa2.09□□□□□ -2.08
LARP4B-210ENST00000609318 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
LARP4B-210ENST00000609318 KRTAP4-12Q9BQ66 201 aa2.07□□□□□ -2.08
LARP4B-210ENST00000609318 KRTAP4-2Q9BYR5 136 aa2.07□□□□□ -2.08
LARP4B-210ENST00000609318 KRTAP5-10Q6L8G5 202 aa1.89□□□□□ -2.11
LARP4B-210ENST00000609318 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
LARP4B-210ENST00000609318 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
LARP4B-210ENST00000609318 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
LARP4B-210ENST00000609318 KRTAP5-1Q6L8H4 278 aa1.82□□□□□ -2.12
LARP4B-210ENST00000609318 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
LARP4B-210ENST00000609318 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
LARP4B-210ENST00000609318 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
LARP4B-210ENST00000609318 MUC5BQ9HC84 5762 aaPredicted RBP1.67□□□□□ -2.14
LARP4B-210ENST00000609318 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
LARP4B-210ENST00000609318 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
LARP4B-210ENST00000609318 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 390.7 ms