RNA–Protein interactions for RNA: ENST00000607102.1

CNN2-212, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-212ENST00000607102 KRTAP19-3Q7Z4W3 81 aa5.76□□□□□ -1.49
CNN2-212ENST00000607102 MT1LQ93083 61 aa5.76□□□□□ -1.49
CNN2-212ENST00000607102 SPRR2EP22531 72 aa5.75□□□□□ -1.49
CNN2-212ENST00000607102 SPRR2BP35325 72 aa5.75□□□□□ -1.49
CNN2-212ENST00000607102 SPRR2AP35326 72 aa5.75□□□□□ -1.49
CNN2-212ENST00000607102 MT1GP13640 62 aa5.71□□□□□ -1.5
CNN2-212ENST00000607102 LCE1AQ5T7P2 110 aa5.71□□□□□ -1.5
CNN2-212ENST00000607102 MUC12Q9UKN1 5478 aa5.71□□□□□ -1.5
CNN2-212ENST00000607102 LCE5AQ5TCM9 118 aa5.66□□□□□ -1.5
CNN2-212ENST00000607102 MDN1Q9NU22 5596 aa5.62□□□□□ -1.51
CNN2-212ENST00000607102 LCE3CQ5T5A8 94 aa5.58□□□□□ -1.52
CNN2-212ENST00000607102 MT1MQ8N339 61 aa5.58□□□□□ -1.52
CNN2-212ENST00000607102 SPRR2DP22532 72 aa5.56□□□□□ -1.52
CNN2-212ENST00000607102 NEBP20929 6669 aa5.51□□□□□ -1.53
CNN2-212ENST00000607102 KRTAP4-7Q9BYR0 210 aa5.43□□□□□ -1.54
CNN2-212ENST00000607102 KRTAP4-3Q9BYR4 195 aa5.35□□□□□ -1.55
CNN2-212ENST00000607102 SPRR5A0A1B0GTR4 108 aa5.34□□□□□ -1.55
CNN2-212ENST00000607102 LCE3BQ5TA77 95 aa5.34□□□□□ -1.55
CNN2-212ENST00000607102 KRTAP2-3P0C7H8 128 aa5.32□□□□□ -1.56
CNN2-212ENST00000607102 KRTAP2-4Q9BYR9 128 aa5.32□□□□□ -1.56
CNN2-212ENST00000607102 KRTAP20-1Q3LI63 56 aa5.29□□□□□ -1.56
CNN2-212ENST00000607102 LUZP6Q538Z0 58 aa5.21□□□□□ -1.58
CNN2-212ENST00000607102 DSTQ03001 7570 aaKnown RBP5.19□□□□□ -1.58
CNN2-212ENST00000607102 KRTAP2-2Q9BYT5 123 aa5.19□□□□□ -1.58
CNN2-212ENST00000607102 KRTAP2-1Q9BYU5 128 aa5.19□□□□□ -1.58
CNN2-212ENST00000607102 KRTAP9-6A8MVA2 160 aa5.15□□□□□ -1.59
CNN2-212ENST00000607102 LOC100996750A0A140TA64 210 aa5.12□□□□□ -1.59
CNN2-212ENST00000607102 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
CNN2-212ENST00000607102 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
CNN2-212ENST00000607102 KRTAP5-4Q6L8H1 288 aa4.94□□□□□ -1.62
CNN2-212ENST00000607102 MT1AP04731 61 aa4.93□□□□□ -1.62
CNN2-212ENST00000607102 KRTAP12-4P60329 112 aa4.85□□□□□ -1.63
CNN2-212ENST00000607102 KRTAP6-1Q3LI64 71 aa4.82□□□□□ -1.64
CNN2-212ENST00000607102 MT4P47944 62 aa4.77□□□□□ -1.65
CNN2-212ENST00000607102 NDUFAF8A1L188 74 aa4.76□□□□□ -1.65
CNN2-212ENST00000607102 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
CNN2-212ENST00000607102 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
CNN2-212ENST00000607102 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
CNN2-212ENST00000607102 KRTAP4-6Q9BYQ5 205 aa4.66□□□□□ -1.66
CNN2-212ENST00000607102 SYNE1Q8NF91 8797 aaKnown RBP4.63□□□□□ -1.67
CNN2-212ENST00000607102 KRTAP20-2Q3LI61 65 aa4.63□□□□□ -1.67
CNN2-212ENST00000607102 HMCN1Q96RW7 5635 aa4.6□□□□□ -1.67
CNN2-212ENST00000607102 MT3P25713 68 aa4.51□□□□□ -1.69
CNN2-212ENST00000607102 KRTAP6-2Q3LI66 62 aa4.49□□□□□ -1.69
CNN2-212ENST00000607102 KRTAP5-3Q6L8H2 238 aa4.44□□□□□ -1.7
CNN2-212ENST00000607102 KRTAP5-2Q701N4 177 aa4.44□□□□□ -1.7
CNN2-212ENST00000607102 A0A0A0MQY5 61 aa4.26□□□□□ -1.73
CNN2-212ENST00000607102 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
CNN2-212ENST00000607102 LCE3DQ9BYE3 92 aa4.18□□□□□ -1.74
CNN2-212ENST00000607102 KRTAP4-11Q9BYQ6 195 aa4.07□□□□□ -1.76
CNN2-212ENST00000607102 KRTAP5-10Q6L8G5 202 aa4.06□□□□□ -1.76
CNN2-212ENST00000607102 LCE3EQ5T5B0 92 aa4.05□□□□□ -1.76
CNN2-212ENST00000607102 INE1O15225 51 aa4.04□□□□□ -1.76
CNN2-212ENST00000607102 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
CNN2-212ENST00000607102 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
CNN2-212ENST00000607102 GPR98Q8WXG9 6306 aa3.98□□□□□ -1.77
CNN2-212ENST00000607102 KRTAP5-8O75690 187 aa3.89□□□□□ -1.79
CNN2-212ENST00000607102 KRTAP5-7Q6L8G8 165 aa3.84□□□□□ -1.79
CNN2-212ENST00000607102 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.79
CNN2-212ENST00000607102 H3BS24 57 aa3.75□□□□□ -1.81
CNN2-212ENST00000607102 LCE1CQ5T751 118 aa3.68□□□□□ -1.82
CNN2-212ENST00000607102 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
CNN2-212ENST00000607102 MUC5ACP98088 5654 aa3.66□□□□□ -1.82
CNN2-212ENST00000607102 KRTAP9-9Q9BYP9 154 aa3.65□□□□□ -1.83
CNN2-212ENST00000607102 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
CNN2-212ENST00000607102 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
CNN2-212ENST00000607102 PRM1P04553 51 aa3.38□□□□□ -1.87
CNN2-212ENST00000607102 MUC5BQ9HC84 5762 aaPredicted RBP3.38□□□□□ -1.87
CNN2-212ENST00000607102 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
CNN2-212ENST00000607102 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
CNN2-212ENST00000607102 AHNAKQ09666 5890 aaKnown RBP3.26□□□□□ -1.89
CNN2-212ENST00000607102 KRTAP21-2Q3LI59 83 aa3.15□□□□□ -1.91
CNN2-212ENST00000607102 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
CNN2-212ENST00000607102 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
CNN2-212ENST00000607102 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
CNN2-212ENST00000607102 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
CNN2-212ENST00000607102 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
CNN2-212ENST00000607102 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms