RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 KRTAP19-3Q7Z4W3 81 aa4.32□□□□□ -1.72
NEDD8-MDP1-203ENST00000604306 MT1GP13640 62 aa4.31□□□□□ -1.72
NEDD8-MDP1-203ENST00000604306 KRTAP6-3Q3LI67 103 aa4.29□□□□□ -1.72
NEDD8-MDP1-203ENST00000604306 LCE5AQ5TCM9 118 aa4.25□□□□□ -1.73
NEDD8-MDP1-203ENST00000604306 LUZP6Q538Z0 58 aa4.24□□□□□ -1.73
NEDD8-MDP1-203ENST00000604306 MT1MQ8N339 61 aa4.21□□□□□ -1.74
NEDD8-MDP1-203ENST00000604306 LCE1AQ5T7P2 110 aa4.18□□□□□ -1.74
NEDD8-MDP1-203ENST00000604306 MUC12Q9UKN1 5478 aa4.16□□□□□ -1.74
NEDD8-MDP1-203ENST00000604306 SYNE2Q8WXH0 6885 aaKnown RBP4.14□□□□□ -1.75
NEDD8-MDP1-203ENST00000604306 SPRR2EP22531 72 aa4.12□□□□□ -1.75
NEDD8-MDP1-203ENST00000604306 SPRR2BP35325 72 aa4.12□□□□□ -1.75
NEDD8-MDP1-203ENST00000604306 SPRR2AP35326 72 aa4.12□□□□□ -1.75
NEDD8-MDP1-203ENST00000604306 KRTAP4-7Q9BYR0 210 aa4.11□□□□□ -1.75
NEDD8-MDP1-203ENST00000604306 KRTAP9-7A8MTY7 169 aa4.08□□□□□ -1.76
NEDD8-MDP1-203ENST00000604306 NDUFAF8A1L188 74 aa4.04□□□□□ -1.76
NEDD8-MDP1-203ENST00000604306 KRTAP9-6A8MVA2 160 aa4.04□□□□□ -1.76
NEDD8-MDP1-203ENST00000604306 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
NEDD8-MDP1-203ENST00000604306 MDN1Q9NU22 5596 aa3.99□□□□□ -1.77
NEDD8-MDP1-203ENST00000604306 SPRR2DP22532 72 aa3.98□□□□□ -1.77
NEDD8-MDP1-203ENST00000604306 LOC100996750A0A140TA64 210 aa3.87□□□□□ -1.79
NEDD8-MDP1-203ENST00000604306 NEBP20929 6669 aa3.86□□□□□ -1.79
NEDD8-MDP1-203ENST00000604306 LCE3BQ5TA77 95 aa3.83□□□□□ -1.8
NEDD8-MDP1-203ENST00000604306 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
NEDD8-MDP1-203ENST00000604306 KRTAP2-3P0C7H8 128 aa3.82□□□□□ -1.8
NEDD8-MDP1-203ENST00000604306 KRTAP2-4Q9BYR9 128 aa3.82□□□□□ -1.8
NEDD8-MDP1-203ENST00000604306 KRTAP2-1Q9BYU5 128 aa3.82□□□□□ -1.8
NEDD8-MDP1-203ENST00000604306 DSTQ03001 7570 aaKnown RBP3.77□□□□□ -1.81
NEDD8-MDP1-203ENST00000604306 MT1AP04731 61 aa3.76□□□□□ -1.81
NEDD8-MDP1-203ENST00000604306 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
NEDD8-MDP1-203ENST00000604306 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
NEDD8-MDP1-203ENST00000604306 A0A0A0MQY5 61 aa3.65□□□□□ -1.83
NEDD8-MDP1-203ENST00000604306 H3BS24 57 aa3.65□□□□□ -1.83
NEDD8-MDP1-203ENST00000604306 KRTAP6-1Q3LI64 71 aa3.65□□□□□ -1.83
NEDD8-MDP1-203ENST00000604306 KRTAP20-1Q3LI63 56 aa3.64□□□□□ -1.83
NEDD8-MDP1-203ENST00000604306 LCE4AQ5TA78 99 aa3.62□□□□□ -1.83
NEDD8-MDP1-203ENST00000604306 KRTAP12-4P60329 112 aa3.55□□□□□ -1.84
NEDD8-MDP1-203ENST00000604306 KRTAP9-4Q9BYQ2 154 aa3.55□□□□□ -1.84
NEDD8-MDP1-203ENST00000604306 INE1O15225 51 aa3.48□□□□□ -1.85
NEDD8-MDP1-203ENST00000604306 SYNE1Q8NF91 8797 aaKnown RBP3.46□□□□□ -1.86
NEDD8-MDP1-203ENST00000604306 MT3P25713 68 aa3.41□□□□□ -1.86
NEDD8-MDP1-203ENST00000604306 MT4P47944 62 aa3.39□□□□□ -1.87
NEDD8-MDP1-203ENST00000604306 KRTAP20-2Q3LI61 65 aa3.39□□□□□ -1.87
NEDD8-MDP1-203ENST00000604306 LCE1DQ5T752 114 aa3.38□□□□□ -1.87
NEDD8-MDP1-203ENST00000604306 KRTAP4-6Q9BYQ5 205 aa3.38□□□□□ -1.87
NEDD8-MDP1-203ENST00000604306 KRTAP6-2Q3LI66 62 aa3.36□□□□□ -1.87
NEDD8-MDP1-203ENST00000604306 KRTAP5-2Q701N4 177 aa3.35□□□□□ -1.87
NEDD8-MDP1-203ENST00000604306 KRTAP4-9Q9BYQ8 210 aa3.32□□□□□ -1.88
NEDD8-MDP1-203ENST00000604306 KRTAP5-3Q6L8H2 238 aa3.28□□□□□ -1.88
NEDD8-MDP1-203ENST00000604306 HMCN1Q96RW7 5635 aa3.27□□□□□ -1.89
NEDD8-MDP1-203ENST00000604306 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
NEDD8-MDP1-203ENST00000604306 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
NEDD8-MDP1-203ENST00000604306 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
NEDD8-MDP1-203ENST00000604306 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
NEDD8-MDP1-203ENST00000604306 KRTAP4-11Q9BYQ6 195 aa2.94□□□□□ -1.94
NEDD8-MDP1-203ENST00000604306 AHNAK2Q8IVF2 5795 aa2.9□□□□□ -1.95
NEDD8-MDP1-203ENST00000604306 KRTAP5-1Q6L8H4 278 aa2.85□□□□□ -1.95
NEDD8-MDP1-203ENST00000604306 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.95
NEDD8-MDP1-203ENST00000604306 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
NEDD8-MDP1-203ENST00000604306 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
NEDD8-MDP1-203ENST00000604306 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
NEDD8-MDP1-203ENST00000604306 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
NEDD8-MDP1-203ENST00000604306 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
NEDD8-MDP1-203ENST00000604306 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
NEDD8-MDP1-203ENST00000604306 PRM1P04553 51 aa2.72□□□□□ -1.97
NEDD8-MDP1-203ENST00000604306 GPR98Q8WXG9 6306 aa2.71□□□□□ -1.98
NEDD8-MDP1-203ENST00000604306 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.65□□□□□ -1.99
NEDD8-MDP1-203ENST00000604306 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
NEDD8-MDP1-203ENST00000604306 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
NEDD8-MDP1-203ENST00000604306 KRTAP5-11Q6L8G4 156 aa2.48□□□□□ -2.01
NEDD8-MDP1-203ENST00000604306 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
NEDD8-MDP1-203ENST00000604306 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
NEDD8-MDP1-203ENST00000604306 LCE1FQ5T754 118 aa2.28□□□□□ -2.04
NEDD8-MDP1-203ENST00000604306 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
NEDD8-MDP1-203ENST00000604306 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
NEDD8-MDP1-203ENST00000604306 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
NEDD8-MDP1-203ENST00000604306 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
NEDD8-MDP1-203ENST00000604306 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
NEDD8-MDP1-203ENST00000604306 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 77.6 ms