RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 INE1O15225 51 aa6.33□□□□□ -1.4
PPFIA3-207ENST00000602716 MUC12Q9UKN1 5478 aa6.33□□□□□ -1.4
PPFIA3-207ENST00000602716 SPRR2FQ96RM1 72 aa6.31□□□□□ -1.4
PPFIA3-207ENST00000602716 KRTAP5-9P26371 169 aa6.26□□□□□ -1.41
PPFIA3-207ENST00000602716 KRTAP6-3Q3LI67 103 aa6.19□□□□□ -1.42
PPFIA3-207ENST00000602716 MT1LQ93083 61 aa6.19□□□□□ -1.42
PPFIA3-207ENST00000602716 MDN1Q9NU22 5596 aa6.17□□□□□ -1.42
PPFIA3-207ENST00000602716 KRTAP9-7A8MTY7 169 aa6.12□□□□□ -1.43
PPFIA3-207ENST00000602716 KRTAP19-3Q7Z4W3 81 aa6.09□□□□□ -1.43
PPFIA3-207ENST00000602716 LCE3CQ5T5A8 94 aa6.06□□□□□ -1.44
PPFIA3-207ENST00000602716 LCE1AQ5T7P2 110 aa6.06□□□□□ -1.44
PPFIA3-207ENST00000602716 KRTAP4-7Q9BYR0 210 aa6.06□□□□□ -1.44
PPFIA3-207ENST00000602716 SPRR2EP22531 72 aa6.02□□□□□ -1.45
PPFIA3-207ENST00000602716 SPRR2BP35325 72 aa6.02□□□□□ -1.45
PPFIA3-207ENST00000602716 SPRR2AP35326 72 aa6.02□□□□□ -1.45
PPFIA3-207ENST00000602716 LCE5AQ5TCM9 118 aa6.01□□□□□ -1.45
PPFIA3-207ENST00000602716 MT1MQ8N339 61 aa5.98□□□□□ -1.45
PPFIA3-207ENST00000602716 MT1GP13640 62 aa5.97□□□□□ -1.45
PPFIA3-207ENST00000602716 KRTAP4-3Q9BYR4 195 aa5.94□□□□□ -1.46
PPFIA3-207ENST00000602716 NEBP20929 6669 aa5.85□□□□□ -1.47
PPFIA3-207ENST00000602716 KRTAP9-6A8MVA2 160 aa5.84□□□□□ -1.47
PPFIA3-207ENST00000602716 KRTAP19-4Q3LI73 84 aa5.82□□□□□ -1.48
PPFIA3-207ENST00000602716 DSTQ03001 7570 aaKnown RBP5.79□□□□□ -1.48
PPFIA3-207ENST00000602716 SPRR2DP22532 72 aa5.79□□□□□ -1.48
PPFIA3-207ENST00000602716 LOC100996750A0A140TA64 210 aa5.69□□□□□ -1.5
PPFIA3-207ENST00000602716 KRTAP2-3P0C7H8 128 aa5.65□□□□□ -1.5
PPFIA3-207ENST00000602716 KRTAP2-4Q9BYR9 128 aa5.65□□□□□ -1.5
PPFIA3-207ENST00000602716 KRTAP2-1Q9BYU5 128 aa5.65□□□□□ -1.5
PPFIA3-207ENST00000602716 LCE3BQ5TA77 95 aa5.57□□□□□ -1.52
PPFIA3-207ENST00000602716 KRTAP5-5Q701N2 237 aaPredicted RBP5.41□□□□□ -1.54
PPFIA3-207ENST00000602716 KRTAP20-1Q3LI63 56 aa5.4□□□□□ -1.55
PPFIA3-207ENST00000602716 KRTAP2-2Q9BYT5 123 aa5.3□□□□□ -1.56
PPFIA3-207ENST00000602716 KRTAP6-1Q3LI64 71 aa5.24□□□□□ -1.57
PPFIA3-207ENST00000602716 MT1AP04731 61 aa5.23□□□□□ -1.57
PPFIA3-207ENST00000602716 KRTAP5-4Q6L8H1 288 aa5.2□□□□□ -1.58
PPFIA3-207ENST00000602716 KRTAP4-6Q9BYQ5 205 aa5.18□□□□□ -1.58
PPFIA3-207ENST00000602716 SYNE1Q8NF91 8797 aaKnown RBP5.18□□□□□ -1.58
PPFIA3-207ENST00000602716 KRTAP4-9Q9BYQ8 210 aa5.08□□□□□ -1.6
PPFIA3-207ENST00000602716 MT4P47944 62 aa5.07□□□□□ -1.6
PPFIA3-207ENST00000602716 LCE4AQ5TA78 99 aa5.07□□□□□ -1.6
PPFIA3-207ENST00000602716 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
PPFIA3-207ENST00000602716 HMCN1Q96RW7 5635 aa4.97□□□□□ -1.61
PPFIA3-207ENST00000602716 KRTAP12-4P60329 112 aa4.96□□□□□ -1.62
PPFIA3-207ENST00000602716 KRTAP9-4Q9BYQ2 154 aa4.96□□□□□ -1.62
PPFIA3-207ENST00000602716 KRTAP20-2Q3LI61 65 aa4.89□□□□□ -1.63
PPFIA3-207ENST00000602716 KRTAP6-2Q3LI66 62 aa4.84□□□□□ -1.63
PPFIA3-207ENST00000602716 KRTAP5-3Q6L8H2 238 aa4.72□□□□□ -1.65
PPFIA3-207ENST00000602716 KRTAP5-2Q701N4 177 aa4.7□□□□□ -1.66
PPFIA3-207ENST00000602716 MT3P25713 68 aa4.7□□□□□ -1.66
PPFIA3-207ENST00000602716 LCE3DQ9BYE3 92 aa4.65□□□□□ -1.66
PPFIA3-207ENST00000602716 LCE3EQ5T5B0 92 aa4.6□□□□□ -1.67
PPFIA3-207ENST00000602716 OBSCNQ5VST9 7968 aa4.52□□□□□ -1.69
PPFIA3-207ENST00000602716 AHNAK2Q8IVF2 5795 aa4.47□□□□□ -1.69
PPFIA3-207ENST00000602716 PRM1P04553 51 aa4.38□□□□□ -1.71
PPFIA3-207ENST00000602716 KRTAP4-11Q9BYQ6 195 aa4.26□□□□□ -1.73
PPFIA3-207ENST00000602716 KRTAP5-10Q6L8G5 202 aa4.22□□□□□ -1.73
PPFIA3-207ENST00000602716 GPR98Q8WXG9 6306 aa4.14□□□□□ -1.75
PPFIA3-207ENST00000602716 KRTAP5-8O75690 187 aa4.12□□□□□ -1.75
PPFIA3-207ENST00000602716 KRTAP5-1Q6L8H4 278 aa4.11□□□□□ -1.75
PPFIA3-207ENST00000602716 LCE1EQ5T753 118 aa4.09□□□□□ -1.76
PPFIA3-207ENST00000602716 KRTAP9-9Q9BYP9 154 aa4.07□□□□□ -1.76
PPFIA3-207ENST00000602716 MUC5ACP98088 5654 aa3.98□□□□□ -1.77
PPFIA3-207ENST00000602716 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
PPFIA3-207ENST00000602716 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
PPFIA3-207ENST00000602716 KRTAP5-7Q6L8G8 165 aa3.92□□□□□ -1.78
PPFIA3-207ENST00000602716 KRTAP4-12Q9BQ66 201 aa3.9□□□□□ -1.78
PPFIA3-207ENST00000602716 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
PPFIA3-207ENST00000602716 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.83
PPFIA3-207ENST00000602716 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.57□□□□□ -1.84
PPFIA3-207ENST00000602716 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
PPFIA3-207ENST00000602716 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
PPFIA3-207ENST00000602716 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
PPFIA3-207ENST00000602716 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
PPFIA3-207ENST00000602716 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
PPFIA3-207ENST00000602716 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
PPFIA3-207ENST00000602716 KRTAP21-1Q3LI58 79 aa2.81□□□□□ -1.96
PPFIA3-207ENST00000602716 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
PPFIA3-207ENST00000602716 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms