RNA–Protein interactions for RNA: ENST00000602540.5

PHLDA1-202, Transcript of pleckstrin homology like domain family A member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHLDA1, Length 5,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA1-202ENST00000602540 PRM1P04553 51 aa5.71□□□□□ -1.5
PHLDA1-202ENST00000602540 KRTAP19-6Q3LI70 58 aa5.7□□□□□ -1.5
PHLDA1-202ENST00000602540 LOC100996750A0A140TA64 210 aa5.64□□□□□ -1.51
PHLDA1-202ENST00000602540 LCE1BQ5T7P3 118 aa5.6□□□□□ -1.51
PHLDA1-202ENST00000602540 LCE1DQ5T752 114 aa5.57□□□□□ -1.52
PHLDA1-202ENST00000602540 KRTAP4-3Q9BYR4 195 aa5.56□□□□□ -1.52
PHLDA1-202ENST00000602540 KRTAP9-2Q9BYQ4 174 aa5.54□□□□□ -1.52
PHLDA1-202ENST00000602540 MT1AP04731 61 aa5.46□□□□□ -1.54
PHLDA1-202ENST00000602540 FAT4Q6V0I7 4981 aa5.44□□□□□ -1.54
PHLDA1-202ENST00000602540 RNF213Q63HN8 5207 aa5.43□□□□□ -1.54
PHLDA1-202ENST00000602540 KRTAP19-7Q3SYF9 63 aa5.38□□□□□ -1.55
PHLDA1-202ENST00000602540 HMCN2Q8NDA2 5059 aa5.33□□□□□ -1.56
PHLDA1-202ENST00000602540 LCE2AQ5TA79 106 aaPredicted RBP5.32□□□□□ -1.56
PHLDA1-202ENST00000602540 KRTAP2-3P0C7H8 128 aa5.31□□□□□ -1.56
PHLDA1-202ENST00000602540 KRTAP2-4Q9BYR9 128 aa5.31□□□□□ -1.56
PHLDA1-202ENST00000602540 KRTAP2-1Q9BYU5 128 aa5.31□□□□□ -1.56
PHLDA1-202ENST00000602540 SYNE1Q8NF91 8797 aaKnown RBP5.3□□□□□ -1.56
PHLDA1-202ENST00000602540 UBR4Q5T4S7 5183 aa5.28□□□□□ -1.56
PHLDA1-202ENST00000602540 LCE5AQ5TCM9 118 aa5.26□□□□□ -1.57
PHLDA1-202ENST00000602540 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
PHLDA1-202ENST00000602540 KRTAP9-6A0A140TA67 174 aa5.25□□□□□ -1.57
PHLDA1-202ENST00000602540 KRTAP20-1Q3LI63 56 aa5.18□□□□□ -1.58
PHLDA1-202ENST00000602540 LCE1AQ5T7P2 110 aa5.12□□□□□ -1.59
PHLDA1-202ENST00000602540 MUC2Q02817 5179 aa5.07□□□□□ -1.6
PHLDA1-202ENST00000602540 FSIP2Q5CZC0 6907 aa5.05□□□□□ -1.6
PHLDA1-202ENST00000602540 KRTAP6-1Q3LI64 71 aa5.04□□□□□ -1.6
PHLDA1-202ENST00000602540 KRTAP6-2Q3LI66 62 aa5.03□□□□□ -1.6
PHLDA1-202ENST00000602540 KRTAP6-3Q3LI67 103 aa5.03□□□□□ -1.6
PHLDA1-202ENST00000602540 KRTAP9-4Q9BYQ2 154 aa5.02□□□□□ -1.61
PHLDA1-202ENST00000602540 KRTAP9-7A8MTY7 169 aa4.99□□□□□ -1.61
PHLDA1-202ENST00000602540 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
PHLDA1-202ENST00000602540 SYNE2Q8WXH0 6885 aaKnown RBP4.91□□□□□ -1.62
PHLDA1-202ENST00000602540 KRTAP9-6A8MVA2 160 aa4.88□□□□□ -1.63
PHLDA1-202ENST00000602540 OBSCNQ5VST9 7968 aa4.84□□□□□ -1.64
PHLDA1-202ENST00000602540 LCE1CQ5T751 118 aa4.83□□□□□ -1.64
PHLDA1-202ENST00000602540 LCE1EQ5T753 118 aa4.83□□□□□ -1.64
PHLDA1-202ENST00000602540 LCE1FQ5T754 118 aa4.83□□□□□ -1.64
PHLDA1-202ENST00000602540 KRTAP2-2Q9BYT5 123 aa4.81□□□□□ -1.64
PHLDA1-202ENST00000602540 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.77□□□□□ -1.65
PHLDA1-202ENST00000602540 USH2AO75445 5202 aa4.61□□□□□ -1.67
PHLDA1-202ENST00000602540 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.7
PHLDA1-202ENST00000602540 KMT2DO14686 5537 aa4.39□□□□□ -1.71
PHLDA1-202ENST00000602540 FCGBPQ9Y6R7 5405 aaPredicted RBP4.38□□□□□ -1.71
PHLDA1-202ENST00000602540 DSTQ03001 7570 aaKnown RBP4.25□□□□□ -1.73
PHLDA1-202ENST00000602540 SSPOA2VEC9 5147 aa4.17□□□□□ -1.74
PHLDA1-202ENST00000602540 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
PHLDA1-202ENST00000602540 KRTAP5-9P26371 169 aa4.16□□□□□ -1.74
PHLDA1-202ENST00000602540 MACF1Q9UPN3 7388 aaKnown RBP4.15□□□□□ -1.74
PHLDA1-202ENST00000602540 NEBP20929 6669 aa4.09□□□□□ -1.75
PHLDA1-202ENST00000602540 MUC12Q9UKN1 5478 aa4.09□□□□□ -1.75
PHLDA1-202ENST00000602540 KRTAP4-6Q9BYQ5 205 aa4.07□□□□□ -1.76
PHLDA1-202ENST00000602540 KRTAP20-2Q3LI61 65 aa4.07□□□□□ -1.76
PHLDA1-202ENST00000602540 MUC19Q7Z5P9 8384 aa3.89□□□□□ -1.79
PHLDA1-202ENST00000602540 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
PHLDA1-202ENST00000602540 KRTAP5-4Q6L8H1 288 aa3.77□□□□□ -1.81
PHLDA1-202ENST00000602540 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
PHLDA1-202ENST00000602540 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
PHLDA1-202ENST00000602540 MDN1Q9NU22 5596 aa3.74□□□□□ -1.81
PHLDA1-202ENST00000602540 KRTAP5-5Q701N2 237 aaPredicted RBP3.64□□□□□ -1.83
PHLDA1-202ENST00000602540 GPR98Q8WXG9 6306 aa3.63□□□□□ -1.83
PHLDA1-202ENST00000602540 KRTAP5-3Q6L8H2 238 aa3.28□□□□□ -1.88
PHLDA1-202ENST00000602540 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
PHLDA1-202ENST00000602540 HMCN1Q96RW7 5635 aa3.02□□□□□ -1.93
PHLDA1-202ENST00000602540 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
PHLDA1-202ENST00000602540 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
PHLDA1-202ENST00000602540 KRTAP5-8O75690 187 aa2.96□□□□□ -1.93
PHLDA1-202ENST00000602540 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
PHLDA1-202ENST00000602540 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
PHLDA1-202ENST00000602540 MUC5BQ9HC84 5762 aaPredicted RBP2.74□□□□□ -1.97
PHLDA1-202ENST00000602540 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
PHLDA1-202ENST00000602540 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
PHLDA1-202ENST00000602540 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
PHLDA1-202ENST00000602540 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
PHLDA1-202ENST00000602540 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
PHLDA1-202ENST00000602540 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
PHLDA1-202ENST00000602540 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
PHLDA1-202ENST00000602540 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 88.7 ms